Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G068500 Populus trichocarpa HOM05D005612 ORTHO05D007014 3.7e-227 791.2 394 100.0
Sabra14G0048200 Salix brachista HOM05D005612 ORTHO05D007014 2.0e-188 662.5 385 87.0
Atru.chr2.2479 Acer truncatum HOM05D005612 ORTHO05D007014 7.3e-167 590.9 397 75.6
GSVIVG01027677001 Vitis vinifera HOM05D005612 ORTHO05D007014 3.4e-164 582.0 386 76.4
Ciclev10010228m.g Citrus clementina HOM05D005612 ORTHO05D007014 8.4e-163 577.4 389 75.6
RcHm_v2.0_Chr3g0497141 Rosa chinensis HOM05D005612 ORTHO05D007014 4.1e-162 575.1 383 75.7
QL08p052678 Quercus lobata HOM05D005612 ORTHO05D007014 4.6e-161 571.6 387 73.9
Prupe.6G155400 Prunus persica HOM05D005612 ORTHO05D007014 2.3e-160 569.3 387 73.9
CANSAT01G1400 Cannabis sativa HOM05D005612 ORTHO05D007014 3.9e-160 568.5 380 76.1
Manes.01G266600 Manihot esculenta HOM05D005612 ORTHO05D007014 9.6e-159 563.9 388 73.5
FAN28G0581 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.6e-158 563.1 383 73.1
FAN28G2973 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.8e-157 559.7 383 72.8
Phvul.011G138100 Phaseolus vulgaris HOM05D005612 ORTHO05D007014 6.9e-157 557.8 382 73.6
Manes.05G046700 Manihot esculenta HOM05D005612 ORTHO05D007014 9.0e-157 557.4 400 71.8
TAR375G1134 Trochodendron aralioides HOM05D005612 ORTHO05D007014 4.4e-156 555.1 388 72.4
FAN23G2738 Fragaria x ananassa HOM05D005612 ORTHO05D007014 5.8e-156 554.7 383 72.3
FvH4_1g28100 Fragaria vesca HOM05D005612 ORTHO05D007014 7.6e-156 554.3 383 72.1
TWI14G1300 Tripterygium wilfordii HOM05D005612 ORTHO05D007014 1.3e-155 553.5 394 71.3
Lj3g0004128 Lotus japonicus HOM05D005612 ORTHO05D007014 1.7e-155 553.1 384 73.2
Duzib138G1608 Durio zibethinus HOM05D005612 ORTHO05D007014 6.4e-155 551.2 403 71.0
FAN26G0204 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.1e-154 550.4 405 68.6
Lalb_Chr01g0021461 Lupinus albus HOM05D005612 ORTHO05D007014 1.9e-154 549.7 380 72.9
Lalb_Chr03g0039601 Lupinus albus HOM05D005612 ORTHO05D007014 1.9e-154 549.7 383 71.3
CSS0047351 Camellia sinensis var. sinensis HOM05D005612 ORTHO05D007014 7.1e-154 547.7 388 71.4
Gorai.004G162600 Gossypium raimondii HOM05D005612 ORTHO05D007014 9.3e-154 547.4 403 69.7
Thecc.01G378200 Theobroma cacao HOM05D005612 ORTHO05D007014 1.2e-153 547.0 403 70.0
COL.COLO4_12531 Corchorus olitorius HOM05D005612 ORTHO05D007014 2.7e-153 545.8 364 74.7
Hma1.2p1_2025F.1_g311480 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 4.6e-153 545.0 386 72.3
vmacro13411 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 4.6e-153 545.0 387 72.9
Gohir.A08G135500 Gossypium hirsutum HOM05D005612 ORTHO05D007014 6.0e-153 544.7 403 69.5
Haze_16797 Corylus avellana HOM05D005612 ORTHO05D007014 7.8e-153 544.3 359 74.4
Dinv43696 Davidia involucrata HOM05D005612 ORTHO05D007014 2.3e-152 542.7 385 72.5
Cfa015219 Carpinus fangiana HOM05D005612 ORTHO05D007014 8.7e-152 540.8 360 73.6
Glyma.12G134000 Glycine max HOM05D005612 ORTHO05D007014 1.9e-151 539.7 383 71.0
Cpa.g.sc18.108 Carica papaya HOM05D005612 ORTHO05D007014 2.5e-151 539.3 376 72.3
CiPaw.01G263000 Carya illinoinensis HOM05D005612 ORTHO05D007014 3.3e-151 538.9 385 72.5
Hma1.2p1_0511F.1_g169190 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 4.3e-151 538.5 386 71.5
Psat0s2995g0040 Pisum sativum HOM05D005612 ORTHO05D007014 9.6e-151 537.3 384 70.8
Glyma.06G270700 Glycine max HOM05D005612 ORTHO05D007014 1.3e-150 537.0 386 71.2
Nn4g26368 Nelumbo nucifera HOM05D005612 ORTHO05D007014 1.3e-150 537.0 394 69.5
THA.LOC104827614 Tarenaya hassleriana HOM05D005612 ORTHO05D007014 4.8e-150 535.0 399 68.7
DCAR_008555 Daucus carota HOM05D005612 ORTHO05D007014 1.8e-149 533.1 387 71.1
MD00G1094900 Malus domestica HOM05D005612 ORTHO05D007014 1.8e-149 533.1 390 70.8
Actinidia12252 Actinidia chinensis HOM05D005612 ORTHO05D007014 4.0e-149 531.9 384 70.1
TPR.G17234 Trifolium pratense HOM05D005612 ORTHO05D007014 4.0e-149 531.9 384 70.3
Sed0014004 Sechium edule HOM05D005612 ORTHO05D007014 2.0e-148 529.6 384 70.6
Gohir.D08G156300 Gossypium hirsutum HOM05D005612 ORTHO05D007014 3.4e-148 528.9 397 68.8
Medtr4g053430 Medicago truncatula HOM05D005612 ORTHO05D007014 4.5e-148 528.5 347 75.8
arahy.Tifrunner.gnm1.ann1.39QM8U Arachis hypogaea HOM05D005612 ORTHO05D007014 5.8e-148 528.1 382 71.2
CsaV3_3G009760 Cucumis sativus L. HOM05D005612 ORTHO05D007014 7.6e-148 527.7 383 69.5
Eucgr.E01443 Eucalyptus grandis HOM05D005612 ORTHO05D007014 7.6e-148 527.7 391 69.3
ClCG05G002330 Citrullus lanatus HOM05D005612 ORTHO05D007014 9.9e-148 527.3 398 67.8
Aqoxy3G02061 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 2.2e-147 526.2 390 69.5
arahy.Tifrunner.gnm1.ann1.Q1YE57 Arachis hypogaea HOM05D005612 ORTHO05D007014 2.2e-147 526.2 382 70.7
Nitab4.5_0000264g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 2.2e-147 526.2 388 69.3
Carub.0004s2795 Capsella rubella HOM05D005612 ORTHO05D007014 4.9e-147 525.0 397 67.5
Aqoxy1G04104 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 6.4e-147 524.6 390 69.5
MSTRG.17178 Avicennia marina HOM05D005612 ORTHO05D007014 4.2e-146 521.9 382 69.1
Thhalv10001485m.g Eutrema salsugineum HOM05D005612 ORTHO05D007014 2.1e-145 519.6 398 67.6
Solyc08g006610.3 Solanum lycopersicum HOM05D005612 ORTHO05D007014 2.1e-145 519.6 386 67.9
AL4G44420 Arabidopsis lyrata HOM05D005612 ORTHO05D007014 7.9e-145 517.7 389 69.7
Migut.B01623 Erythranthe guttata HOM05D005612 ORTHO05D007014 7.9e-145 517.7 382 68.8
PSO339G2081 Papaver somniferum HOM05D005612 ORTHO05D007014 3.0e-144 515.8 385 69.4
AT2G45320 Arabidopsis thaliana HOM05D005612 ORTHO05D007014 3.9e-144 515.4 396 68.4
Sopen08g002560 Solanum pennellii HOM05D005612 ORTHO05D007014 3.9e-144 515.4 386 67.9
CAN.G530.1 Capsicum annuum HOM05D005612 ORTHO05D007014 3.3e-143 512.3 388 66.8
Peaxi162Scf00045g01936 Petunia axillaris HOM05D005612 ORTHO05D007014 7.4e-143 511.1 388 67.8
PSO384G4101 Papaver somniferum HOM05D005612 ORTHO05D007014 1.6e-142 510.0 384 69.0
AUR62000130 Chenopodium quinoa HOM05D005612 ORTHO05D007014 2.8e-142 509.2 393 67.2
Sp4g27340 Schrenkiella parvula HOM05D005612 ORTHO05D007014 3.7e-142 508.8 398 67.1
PGR042G0232 Punica granatum HOM05D005612 ORTHO05D007014 4.8e-142 508.4 379 68.6
BcaB01g03271 Brassica carinata HOM05D005612 ORTHO05D007014 2.6e-140 502.7 399 65.4
A03p25180 Brassica napus HOM05D005612 ORTHO05D007014 4.9e-139 498.4 401 65.8
C03p30020 Brassica napus HOM05D005612 ORTHO05D007014 6.4e-139 498.0 400 65.5
BraA03t11718Z Brassica rapa HOM05D005612 ORTHO05D007014 6.4e-139 498.0 401 65.6
Cc02_g24020 Coffea canephora HOM05D005612 ORTHO05D007014 1.1e-138 497.3 387 66.7
Oeu055499.1 Olea europaea HOM05D005612 ORTHO05D007014 1.9e-138 496.5 382 67.0
BcaC01g05140 Brassica carinata HOM05D005612 ORTHO05D007014 2.4e-138 496.1 398 65.6
BolC3t15349H Brassica oleracea HOM05D005612 ORTHO05D007014 2.4e-138 496.1 398 65.6
vmacro21020 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 3.2e-138 495.7 360 70.0
Hund07502 Selenicereus undatus HOM05D005612 ORTHO05D007014 7.1e-138 494.6 409 63.8
SalBow5G3218 Salvia bowleyana HOM05D005612 ORTHO05D007014 9.3e-138 494.2 364 68.4
Ca_19396_v3 Cicer arietinum L. HOM05D005612 ORTHO05D007014 1.6e-137 493.4 370 67.3
EL10Ac4g10240 Beta vulgaris HOM05D005612 ORTHO05D007014 1.0e-136 490.7 384 66.7
ECA236G2759 Erigeron canadensis HOM05D005612 ORTHO05D007014 1.8e-136 490.0 394 65.2
Lsat_1_v5_gn_7_9741 Lactuca sativa HOM05D005612 ORTHO05D007014 8.7e-136 487.6 373 67.0
HanXRQChr04g0122751 Helianthus annuus HOM05D005612 ORTHO05D007014 3.4e-132 475.7 385 66.0
Lsat_1_v5_gn_8_86120 Lactuca sativa HOM05D005612 ORTHO05D007014 1.0e-131 474.2 364 67.0
unitig_749.g14376 Utricularia gibba HOM05D005612 ORTHO05D007014 8.4e-131 471.1 382 64.1
Nitab4.5_0005450g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 8.2e-126 454.5 325 70.8
Sc16g0011470 Simmondsia chinensis HOM05D005612 ORTHO05D007014 3.1e-125 452.6 345 68.7
Lj7C530T5 Lonicera japonica HOM05D005612 ORTHO05D007014 1.0e-123 447.6 421 59.6
Ah.04g161950 Amaranthus hybridus HOM05D004275 ORTHO05D005720 2.9e-123 446.0 407 59.5
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 6.1e-121 438.3 319 68.0
MELO3C006197.2 Cucumis melo HOM05D005612 ORTHO05D007014 8.2e-118 427.9 330 66.7
Zm00001eb195050 Zea mays HOM05D005612 ORTHO05D007014 8.5e-115 417.9 375 58.4
VMungo1127G0102 Vigna mungo HOM05D005612 ORTHO05D007014 7.9e-113 411.4 251 78.1
CDE07G1659 Ceratophyllum demersum HOM05D005612 ORTHO05D007014 3.1e-109 399.4 343 61.5
AUR62019310 Chenopodium quinoa HOM05D005612 ORTHO05D007014 4.1e-109 399.1 263 73.4
ATR1100G025 Amborella trichopoda HOM05D005612 ORTHO05D007014 7.0e-101 371.7 304 62.5
unitig_76.g29085 Utricularia gibba HOM05D005612 ORTHO05D007014 1.4e-93 347.4 379 52.0
MBI14_g08144_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 9.1e-93 344.7 265 67.2
CiPaw.09G176500 Carya illinoinensis HOM05D005612 ORTHO05D007014 6.1e-89 332.0 322 55.3
CARHR140520 Cardamine hirsuta HOM05D005612 ORTHO05D007014 8.8e-88 328.2 202 77.2
ATR0686G054 Amborella trichopoda HOM05D005612 ORTHO05D007014 2.0e-87 327.0 262 62.6
Aa31LG1G26830 Aethionema arabicum HOM05D005612 ORTHO05D007014 9.1e-85 318.2 193 76.2
Duzib138G0844 Durio zibethinus HOM05D005612 ORTHO05D007014 7.5e-79 298.5 163 85.9
SGA_v2.0_scaffold153G37000 Striga asiatica HOM05D005612 ORTHO05D007014 2.8e-73 280.0 222 66.7
SMO119G0175 Selaginella moellendorffii HOM05D005612 ORTHO05D007014 1.1e-69 268.1 279 47.7
Dinv32369 Davidia involucrata HOM05D005612 ORTHO05D007014 8.6e-67 258.5 193 68.9
Zm00001eb249030 Zea mays HOM05D005612 ORTHO05D007014 2.6e-63 246.9 219 57.1
Zm00001eb012290 Zea mays HOM05D005612 ORTHO05D007014 7.5e-63 245.4 184 63.0
FAN19G0199 Fragaria x ananassa HOM05D005612 ORTHO05D007014 6.0e-60 235.7 130 83.1
AagrBONN_evm.TU.Sc2ySwM_117.669 Anthoceros agrestis HOM05D005612 ORTHO05D007014 8.3e-54 215.3 217 49.8
Pp3c17_6010 Physcomitrium patens HOM05D005612 ORTHO05D007014 1.5e-50 204.5 343 37.6
CARHR140530 Cardamine hirsuta HOM05D005612 ORTHO05D007014 4.3e-50 203.0 193 59.1
MSTRG.28297 Avicennia marina HOM05D005612 ORTHO05D007014 8.1e-49 198.7 113 78.8
Medtr8g102045 Medicago truncatula HOM05D005612 ORTHO05D007014 2.9e-46 190.3 124 75.8
Zm00001eb385140 Zea mays HOM05D005612 ORTHO05D007014 1.8e-40 171.0 133 61.7
Zm00001eb084960 Zea mays HOM05D005612 ORTHO05D007014 2.4e-40 170.6 133 61.7
Medtr8g102040 Medicago truncatula HOM05D005612 ORTHO05D007014 4.4e-39 166.4 131 63.4
Oeu011925.1 Olea europaea HOM05D005612 ORTHO05D007014 1.7e-35 154.5 200 44.0
Gohir.A08G135200 Gossypium hirsutum HOM05D005612 ORTHO05D007014 2.1e-33 147.5 207 47.3
Rhsim01G0149000 Rhododendron simsii HOM05D005612 ORTHO05D007014 4.0e-32 143.3 243 38.3
SEGI_33395 Sequoiadendron giganteum HOM05D005612 ORTHO05D007014 3.4e-31 140.2 181 47.0
Gohir.A08G135550 Gossypium hirsutum HOM05D005612 ORTHO05D007014 1.1e-29 135.2 189 46.0
Zm00001eb270960 Zea mays HOM05D005612 ORTHO05D002685 1.2e-28 131.7 84 72.6
Haze_18350 Corylus avellana HOM05D005612 ORTHO05D007014 4.8e-25 119.8 72 79.2
Zm00001eb321930 Zea mays HOM05D005612 ORTHO05D007014 4.0e-24 116.7 97 58.8
TAR626G0370 Trochodendron aralioides HOM05D005612 ORTHO05D007014 1.5e-23 114.8 63 85.7
Glyma.20G076400 Glycine max HOM05D005612 ORTHO05D007014 3.4e-23 113.6 75 69.3
MBI14_g08143_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 5.8e-23 112.8 114 57.0
Os06g0571300 Oryza sativa ssp. japonica HOM05D005612 ORTHO05D007014 1.8e-16 91.3 90 60.0
Medtr8g102042 Medicago truncatula HOM05D005612 ORTHO05D007014 1.3e-14 85.1 67 62.7
MD15G1255900 Malus domestica HOM05D001392 ORTHO05D036605 2.1e-12 77.8 45 82.2
Lalb_Chr08g0243441 Lupinus albus HOM05D005612 ORTHO05D007014 8.7e-11 72.4 45 75.6
Dinv39084 Davidia involucrata HOM05D005612 ORTHO05D007014 4.1e-08 63.5 105 37.1
Lalb_Chr16g0388221 Lupinus albus HOM05D005612 ORTHO05D007014 8.5e-06 55.8 34 73.5


User provided reference genes

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