Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G065700 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.9e-82 308.5 159 100.0
Potri.014G061700 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.0e-46 189.5 108 89.8
Potri.014G065000 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.7e-45 186.4 108 88.9
Sabra14G0045800 Salix brachista HOM05D008789 ORTHO05D010785 2.8e-40 169.1 146 63.7
Potri.014G065600 Populus trichocarpa HOM05D008789 ORTHO05D010785 4.0e-39 165.2 162 54.3
Potri.014G064900 Populus trichocarpa HOM05D008789 ORTHO05D010785 3.4e-38 162.2 161 57.1
Potri.014G065250 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.9e-36 156.4 161 52.8
Potri.014G065900 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.2e-35 153.7 159 52.2
Potri.014G061500 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.5e-33 146.7 130 56.9
Potri.014G061800 Populus trichocarpa HOM05D008789 ORTHO05D010785 3.3e-33 145.6 144 54.9
Potri.006G095200 Populus trichocarpa HOM05D008789 ORTHO05D010785 9.5e-33 144.1 136 58.1
Sabra14G0045300 Salix brachista HOM05D008789 ORTHO05D010785 9.5e-33 144.1 169 47.9
Potri.006G095100 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.2e-32 143.7 134 58.2
Potri.014G061600 Populus trichocarpa HOM05D008789 ORTHO05D010785 4.0e-31 138.7 101 70.3
Potri.014G063350 Populus trichocarpa HOM05D008789 ORTHO05D010785 5.2e-31 138.3 101 70.3
Potri.014G065200 Populus trichocarpa HOM05D008789 ORTHO05D010785 8.9e-31 137.5 101 68.3
Potri.014G065300 Populus trichocarpa HOM05D008789 ORTHO05D010785 8.9e-31 137.5 100 70.0
Potri.014G065100 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.2e-30 137.1 161 48.4
Potri.001G407401 Populus trichocarpa HOM05D008789 ORTHO05D010785 4.4e-30 135.2 160 48.8
Potri.001G407500 Populus trichocarpa HOM05D008789 ORTHO05D010785 4.4e-30 135.2 160 48.8
Sabra14G0045400 Salix brachista HOM05D008789 ORTHO05D010785 4.4e-30 135.2 101 68.3
Sabra14G0045600 Salix brachista HOM05D008789 ORTHO05D010785 5.8e-30 134.8 101 67.3
Sabra14G0045500 Salix brachista HOM05D008789 ORTHO05D010785 2.9e-29 132.5 93 72.0
Potri.014G065951 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.1e-28 130.6 89 77.5
Sabra13G0031400 Salix brachista HOM05D008789 ORTHO05D010785 1.1e-28 130.6 161 47.8
Sabra13G0031000 Salix brachista HOM05D008789 ORTHO05D010785 1.6e-27 126.7 161 47.2
Sabra14G0045900 Salix brachista HOM05D008789 ORTHO05D010785 3.5e-27 125.6 93 69.9
Sabra13G0031200 Salix brachista HOM05D008789 ORTHO05D010785 7.8e-27 124.4 161 46.0
Sabra16G0267600 Salix brachista HOM05D008789 ORTHO05D010785 1.7e-26 123.2 163 45.4
Sabra16G0269400 Salix brachista HOM05D008789 ORTHO05D010785 5.1e-26 121.7 163 45.4
Potri.014G065500 Populus trichocarpa HOM05D008789 ORTHO05D010785 3.6e-24 115.5 103 64.1
Sabra16G0267200 Salix brachista HOM05D008789 ORTHO05D010785 1.1e-23 114.0 161 46.0
Sabra16G0269100 Salix brachista HOM05D008789 ORTHO05D010785 5.2e-23 111.7 161 45.3
Sabra16G0268800 Salix brachista HOM05D008789 ORTHO05D010785 7.6e-22 107.8 148 44.6
Sabra16G0271000 Salix brachista HOM05D008789 ORTHO05D010785 7.6e-22 107.8 148 44.6
Sabra13G0031600 Salix brachista HOM05D008789 ORTHO05D010785 1.9e-17 93.2 82 56.1
Sabra06G0073100 Salix brachista HOM05D000076 ORTHO05D001377 5.6e-17 91.7 137 45.3
Sabra13G0031900 Salix brachista HOM05D008789 ORTHO05D010785 1.1e-12 77.4 72 51.4
Sabra13G0030900 Salix brachista HOM05D008789 ORTHO05D010785 9.3e-12 74.3 161 36.0
Ciclev10013523m.g Citrus clementina HOM05D019503 ORTHO05D010785 1.6e-11 73.6 117 38.5
Manes.05G049300 Manihot esculenta HOM05D008789 ORTHO05D010785 1.7e-10 70.1 124 34.7
Gorai.011G287200 Gossypium raimondii HOM05D009631 ORTHO05D011824 6.6e-10 68.2 124 34.7
Thecc.10G017000 Theobroma cacao HOM05D009631 ORTHO05D011824 1.1e-09 67.4 117 32.5
Gorai.011G287500 Gossypium raimondii HOM05D009631 ORTHO05D011824 1.5e-09 67.0 124 33.9
Gorai.011G287300 Gossypium raimondii HOM05D009631 ORTHO05D011824 1.9e-09 66.6 124 34.7
Thecc.10G017200 Theobroma cacao HOM05D009631 ORTHO05D011824 1.3e-08 63.9 117 32.5
Gorai.011G287400 Gossypium raimondii HOM05D009631 ORTHO05D011824 4.8e-08 62.0 133 30.8
Gorai.011G287000 Gossypium raimondii HOM05D009631 ORTHO05D011824 3.1e-07 59.3 129 31.0
Thecc.10G017700 Theobroma cacao HOM05D009631 ORTHO05D011824 3.1e-07 59.3 131 29.0
Thecc.06G016000 Theobroma cacao HOM05D009631 ORTHO05D011824 9.0e-07 57.8 117 30.8
Gorai.011G287100 Gossypium raimondii HOM05D009631 ORTHO05D011824 1.2e-06 57.4 133 30.8
Haze_02703 Corylus avellana HOM05D014972 ORTHO05D011719 3.4e-06 55.8 121 36.4
QL07p007766 Quercus lobata HOM05D014023 ORTHO05D011719 4.5e-06 55.5 136 30.9
Rhsim07G0031400 Rhododendron simsii HOM05D010926 ORTHO05D011735 5.8e-06 55.1 131 29.0
Sabra01G0170800 Salix brachista HOM05D000301 ORTHO05D011719 5.8e-06 55.1 141 31.2
arahy.Tifrunner.gnm1.ann1.3M5ES5 Arachis hypogaea HOM05D019503 ORTHO05D010785 7.6e-06 54.7 137 27.0
arahy.Tifrunner.gnm1.ann1.R8WE5X Arachis hypogaea HOM05D019503 ORTHO05D010785 7.6e-06 54.7 137 27.7
Thecc.01G384000 Theobroma cacao HOM05D019503 ORTHO05D010785 9.9e-06 54.3 133 30.8


User provided reference genes

Program Settings