Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 6.6e-135 484.2 270 100.0
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 1.6e-101 373.2 272 82.0
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 2.0e-67 260.0 257 64.2
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 8.5e-66 254.6 261 60.5
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 3.3e-62 242.7 299 51.2
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 2.9e-58 229.6 270 56.3
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 2.9e-58 229.6 280 55.0
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 2.5e-57 226.5 266 56.0
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 1.6e-56 223.8 292 54.1
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 1.4e-55 220.7 278 50.4
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 1.8e-55 220.3 331 45.3
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 5.2e-55 218.8 300 48.0
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 6.8e-55 218.4 288 49.3
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.5e-54 217.2 310 47.4
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 2.0e-54 216.9 303 51.5
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 7.5e-54 214.9 284 52.8
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 7.5e-54 214.9 292 49.3
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 1.1e-52 211.1 280 52.5
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 1.4e-52 210.7 286 51.7
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 2.4e-52 209.9 304 49.7
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 3.1e-52 209.5 287 55.1
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 9.1e-52 208.0 242 51.7
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 9.1e-52 208.0 292 50.3
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 1.6e-51 207.2 305 49.5
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 1.6e-51 207.2 294 52.0
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 2.0e-51 206.8 287 52.6
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 5.9e-51 205.3 306 47.4
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 5.9e-51 205.3 303 48.2
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 1.0e-50 204.5 292 50.0
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 5.0e-50 202.2 270 53.3
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 1.1e-49 201.1 288 48.6
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 1.6e-48 197.2 298 48.3
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 1.6e-48 197.2 285 47.4
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 6.1e-48 195.3 279 50.5
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 6.1e-48 195.3 267 46.4
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 6.1e-48 195.3 289 49.8
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 8.0e-48 194.9 293 48.5
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.4e-47 194.1 275 49.8
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 1.4e-47 194.1 284 48.6
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 2.3e-47 193.4 280 46.1
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 4.0e-47 192.6 253 51.8
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 1.2e-46 191.0 292 49.7
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.5e-46 190.7 242 52.1
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.5e-46 190.7 279 51.6
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 1.5e-46 190.7 289 49.8
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 2.0e-46 190.3 276 47.1
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 2.0e-46 190.3 274 49.3
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 5.7e-46 188.7 275 43.6
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 7.5e-46 188.3 297 44.8
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 1.7e-45 187.2 309 43.4
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 6.3e-45 185.3 285 48.8
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 2.4e-44 183.3 277 44.4
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 2.4e-44 183.3 290 45.2
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 4.1e-44 182.6 273 42.5
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 9.1e-44 181.4 277 45.5
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 3.5e-43 179.5 270 51.1
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 1.7e-42 177.2 259 47.1
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 6.6e-42 175.3 297 44.4
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 4.2e-41 172.6 277 43.0
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 4.2e-41 172.6 307 42.3
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 5.6e-41 172.2 278 49.6
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 9.5e-41 171.4 321 39.3
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 2.8e-40 169.9 274 45.6
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 2.8e-40 169.9 330 39.1
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 4.7e-40 169.1 267 45.7
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 1.0e-39 167.9 292 42.8
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.0e-39 167.9 376 40.2
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 2.3e-39 166.8 188 50.0
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 6.8e-39 165.2 271 48.7
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 1.2e-38 164.5 296 43.6
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.6e-38 163.3 337 41.8
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 9.8e-38 161.4 277 48.7
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.7e-37 160.6 268 43.7
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.9e-37 159.8 154 56.5
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 8.3e-37 158.3 266 45.1
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 1.1e-36 157.9 256 48.4
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 1.1e-36 157.9 254 42.1
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 2.4e-36 156.8 258 46.1
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 3.5e-35 152.9 181 51.4
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 4.6e-35 152.5 285 42.5
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 5.9e-35 152.1 266 45.1
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 7.8e-35 151.8 313 40.9
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 1.0e-34 151.4 253 45.1
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 2.9e-34 149.8 266 39.8
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 5.0e-34 149.1 301 39.9
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 5.0e-34 149.1 283 38.5
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 5.6e-33 145.6 282 42.2
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 3.6e-32 142.9 281 36.7
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 1.4e-31 141.0 165 47.9
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 1.4e-31 141.0 250 43.2
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 2.6e-30 136.7 163 47.9
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 1.7e-29 134.0 268 44.0
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 1.7e-29 134.0 268 44.0
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 1.4e-28 131.0 79 75.9
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 1.9e-28 130.6 192 52.6
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 3.2e-28 129.8 269 43.5
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 3.2e-28 129.8 160 46.9
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 1.2e-24 117.9 256 39.8
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 1.6e-24 117.5 256 39.8
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 3.2e-20 103.2 58 72.4
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 1.0e-18 98.2 150 44.0
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 9.5e-17 91.7 293 29.0
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 5.2e-15 85.9 58 63.8
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 1.1e-12 78.2 136 35.3
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 7.8e-11 72.0 93 34.4
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 8.6e-10 68.6 158 32.9
AT4G00140 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.2e-06 58.2 249 26.9
SMO171G0115 Selaginella moellendorffii HOM05D000227 ORTHO05D004725 1.2e-06 58.2 63 41.3
AUR62004167 Chenopodium quinoa HOM05D056854 ORTHO05D044030 2.0e-06 57.4 94 45.7
Lj7P535T24 Lonicera japonica HOM05D007090 ORTHO05D008993 2.6e-06 57.0 83 47.0
Zm00001eb427420 Zea mays HOM05D007090 ORTHO05D008993 5.8e-06 55.8 182 41.8


User provided reference genes

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