Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G058400 Populus trichocarpa HOM05D006988 ORTHO05D008731 4.4e-118 427.9 212 100.0
Sabra14G0042600 Salix brachista HOM05D006988 ORTHO05D008731 4.7e-112 407.9 212 94.8
Manes.01G270400 Manihot esculenta HOM05D006988 ORTHO05D008731 3.5e-91 338.6 210 80.5
Haze_02728 Corylus avellana HOM05D006988 ORTHO05D008731 5.1e-90 334.7 212 78.3
Gorai.001G175700 Gossypium raimondii HOM05D006988 ORTHO05D008731 5.6e-89 331.3 194 83.5
Gohir.D07G153600 Gossypium hirsutum HOM05D006988 ORTHO05D008731 9.6e-89 330.5 194 83.5
Duzib133G0505 Durio zibethinus HOM05D006988 ORTHO05D008731 4.8e-88 328.2 192 82.8
CiPaw.13G030900 Carya illinoinensis HOM05D006988 ORTHO05D008731 1.1e-87 327.0 213 77.0
Ca_27093_v3 Cicer arietinum L. HOM05D006988 ORTHO05D008731 2.4e-87 325.9 215 75.8
COL.COLO4_12466 Corchorus olitorius HOM05D006988 ORTHO05D008731 5.3e-87 324.7 215 76.7
Phvul.008G157000 Phaseolus vulgaris HOM05D006988 ORTHO05D008731 6.9e-87 324.3 207 76.3
Gohir.A07G147500 Gossypium hirsutum HOM05D006988 ORTHO05D008731 1.2e-86 323.6 194 83.0
arahy.Tifrunner.gnm1.ann1.EWF75K Arachis hypogaea HOM05D006988 ORTHO05D008731 1.5e-86 323.2 213 74.2
arahy.Tifrunner.gnm1.ann1.I2GGUW Arachis hypogaea HOM05D006988 ORTHO05D008731 1.5e-86 323.2 213 74.2
Prupe.2G135300 Prunus persica HOM05D006988 ORTHO05D008731 2.0e-86 322.8 215 76.3
Thecc.01G386200 Theobroma cacao HOM05D006988 ORTHO05D008731 2.6e-86 322.4 197 80.7
Atru.chr5.214 Acer truncatum HOM05D006988 ORTHO05D008731 1.7e-85 319.7 190 82.6
MELO3C021141.2 Cucumis melo HOM05D006988 ORTHO05D008731 3.8e-85 318.5 210 75.2
CsaV3_6G009120 Cucumis sativus L. HOM05D006988 ORTHO05D008731 4.9e-85 318.2 210 75.2
VMungo1383G3408 Vigna mungo HOM05D006988 ORTHO05D008731 8.4e-85 317.4 207 75.4
ClCG06G003000 Citrullus lanatus HOM05D006988 ORTHO05D008731 1.1e-84 317.0 210 75.2
FAN03G1007 Fragaria x ananassa HOM05D006988 ORTHO05D008731 2.4e-84 315.8 215 74.0
FvH4_7g10720 Fragaria vesca HOM05D006988 ORTHO05D008731 7.1e-84 314.3 220 73.2
FAN06G3033 Fragaria x ananassa HOM05D006988 ORTHO05D008731 9.3e-84 313.9 221 72.9
FAN06G2548 Fragaria x ananassa HOM05D006988 ORTHO05D008731 1.2e-83 313.5 222 72.5
Glyma.01G076100 Glycine max HOM05D006988 ORTHO05D008731 2.1e-83 312.8 206 73.3
Lj1g0025695 Lotus japonicus HOM05D006988 ORTHO05D008731 4.6e-83 311.6 216 72.7
MD07G1111900 Malus domestica HOM05D006988 ORTHO05D008731 4.6e-83 311.6 215 73.0
Sed0016586 Sechium edule HOM05D006988 ORTHO05D008731 6.0e-83 311.2 188 78.7
CANSAT01G0747 Cannabis sativa HOM05D006988 ORTHO05D008731 1.0e-82 310.5 215 74.0
QL04p035766 Quercus lobata HOM05D006988 ORTHO05D008731 1.3e-82 310.1 220 71.8
Glyma.11G164037 Glycine max HOM05D006988 ORTHO05D008731 2.3e-82 309.3 208 74.0
Solyc10g018590.2 Solanum lycopersicum HOM05D006988 ORTHO05D008731 7.3e-81 304.3 215 73.0
Migut.B01575 Erythranthe guttata HOM05D006988 ORTHO05D008731 9.6e-81 303.9 218 70.2
THA.LOC104814078 Tarenaya hassleriana HOM05D006988 ORTHO05D008731 1.6e-80 303.1 190 75.3
Cc02_g24580 Coffea canephora HOM05D006988 ORTHO05D008731 2.1e-80 302.8 214 71.5
Sopen10g008330 Solanum pennellii HOM05D006988 ORTHO05D008731 4.8e-80 301.6 215 72.1
PGSC0003DMG400011763 Solanum tuberosum HOM05D006988 ORTHO05D008731 1.8e-79 299.7 215 71.2
CSS0001978 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 2.4e-79 299.3 187 79.1
Dinv43657 Davidia involucrata HOM05D006988 ORTHO05D008731 3.1e-79 298.9 227 70.0
CSS0011747 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 5.3e-79 298.1 187 78.6
Nitab4.5_0000882g0050 Nicotiana tabacum HOM05D006988 ORTHO05D008731 1.2e-78 297.0 205 75.1
Hma1.2p1_0341F.1_g130300 Hydrangea macrophylla HOM05D006988 ORTHO05D008731 1.5e-78 296.6 194 75.3
Nn6g33931 Nelumbo nucifera HOM05D006988 ORTHO05D008731 9.9e-78 293.9 185 77.3
SalBow5G4855 Salvia bowleyana HOM05D006988 ORTHO05D008731 9.9e-78 293.9 216 69.4
CARHR248070 Cardamine hirsuta HOM05D006988 ORTHO05D008731 2.9e-77 292.4 188 73.4
Peaxi162Scf00350g00014 Petunia axillaris HOM05D006988 ORTHO05D008731 2.9e-77 292.4 187 74.9
AUR62013709 Chenopodium quinoa HOM05D006988 ORTHO05D008731 4.9e-77 291.6 194 73.7
TAR636G1375 Trochodendron aralioides HOM05D006988 ORTHO05D008731 8.4e-77 290.8 210 70.0
MBI04_g09512_MAGBIO Magnolia biondii HOM05D006988 ORTHO05D008731 1.9e-76 289.7 182 77.5
Rhsim07G0032500 Rhododendron simsii HOM05D006988 ORTHO05D008731 1.9e-76 289.7 188 75.0
AUR62004148 Chenopodium quinoa HOM05D006988 ORTHO05D008731 2.4e-76 289.3 205 71.7
CAN.G160.69 Capsicum annuum HOM05D006988 ORTHO05D008731 3.2e-76 288.9 190 74.2
BcaB01g02207 Brassica carinata HOM05D006988 ORTHO05D008731 5.4e-76 288.1 199 70.9
Carub.0006s3719 Capsella rubella HOM05D006988 ORTHO05D008731 7.1e-76 287.7 188 71.3
Medtr7g444820 Medicago truncatula HOM05D006988 ORTHO05D008731 7.1e-76 287.7 176 77.8
Hund17063 Selenicereus undatus HOM05D006988 ORTHO05D008731 9.3e-76 287.3 206 68.9
AT4G00030 Arabidopsis thaliana HOM05D006988 ORTHO05D008731 1.2e-75 287.0 187 71.7
C09p00070 Brassica napus HOM05D006988 ORTHO05D008731 1.6e-75 286.6 198 71.7
BraA09t35681Z Brassica rapa HOM05D006988 ORTHO05D008731 1.6e-75 286.6 198 71.7
EL10Ac1g00818 Beta vulgaris HOM05D006988 ORTHO05D008731 3.5e-75 285.4 206 69.4
Lsat_1_v5_gn_7_10320 Lactuca sativa HOM05D006988 ORTHO05D008731 6.0e-75 284.6 202 70.3
COL.COLO4_37993 Corchorus olitorius HOM05D006988 ORTHO05D008731 7.9e-75 284.3 212 68.9
Nitab4.5_0001501g0030 Nicotiana tabacum HOM05D006988 ORTHO05D008731 1.8e-74 283.1 205 73.7
BcaC04g24207 Brassica carinata HOM05D006988 ORTHO05D008731 3.9e-74 282.0 198 71.2
BolC9t52942H Brassica oleracea HOM05D006988 ORTHO05D008731 3.9e-74 282.0 198 71.2
AL6G53480 Arabidopsis lyrata HOM05D006988 ORTHO05D008731 8.7e-74 280.8 201 67.2
Sp6g00080 Schrenkiella parvula HOM05D006988 ORTHO05D008731 1.1e-73 280.4 178 75.8
Aqoxy7G00790 Aquilegia oxysepala HOM05D006988 ORTHO05D008731 5.6e-73 278.1 224 67.0
DCAR_031865 Daucus carota HOM05D006988 ORTHO05D008731 7.4e-73 277.7 205 67.8
ECA236G3211 Erigeron canadensis HOM05D006988 ORTHO05D008731 7.4e-73 277.7 203 68.0
Lj9A563T51 Lonicera japonica HOM05D006988 ORTHO05D008731 7.4e-73 277.7 208 68.3
Aa31LG5G100 Aethionema arabicum HOM05D006988 ORTHO05D008731 3.7e-72 275.4 232 60.8
HanXRQChr06g0168881 Helianthus annuus HOM05D006988 ORTHO05D008731 2.4e-71 272.7 193 71.5
SGA_v2.0_scaffold153G36954 Striga asiatica HOM05D006988 ORTHO05D008731 3.1e-71 272.3 226 61.5
SEGI_39512 Sequoiadendron giganteum HOM05D006988 ORTHO05D008731 1.2e-70 270.4 180 70.6
ATR0317G076 Amborella trichopoda HOM05D006988 ORTHO05D008731 2.6e-70 269.2 208 65.9
TWI59G0585 Tripterygium wilfordii HOM05D006988 ORTHO05D008731 2.6e-70 269.2 212 68.4
PSO170G6265 Papaver somniferum HOM05D006988 ORTHO05D008731 2.5e-68 262.7 177 72.9
RcHm_v2.0_Chr1g0348671 Rosa chinensis HOM05D006988 ORTHO05D008731 1.8e-66 256.5 185 71.9
TPR.G39083 Trifolium pratense HOM05D006988 ORTHO05D008731 5.1e-66 255.0 144 82.6
GSVIVG01018209001 Vitis vinifera HOM05D006988 ORTHO05D008731 8.7e-66 254.2 141 85.1
Ciclev10022767m.g Citrus clementina HOM05D006988 ORTHO05D008731 4.3e-65 251.9 141 83.7
FAN01G2452 Fragaria x ananassa HOM05D006988 ORTHO05D008731 9.6e-65 250.8 181 72.4
Cpa.g.sc620.2 Carica papaya HOM05D006988 ORTHO05D008731 3.7e-64 248.8 185 71.9
Mapoly0004s0296 Marchantia polymorpha HOM05D006988 ORTHO05D008731 1.9e-60 236.5 170 65.3
Eucgr.D02502 Eucalyptus grandis HOM05D006988 ORTHO05D008731 3.2e-60 235.7 163 74.2
Pp3c14_7270 Physcomitrium patens HOM05D006988 ORTHO05D008731 5.5e-60 235.0 194 60.8
Os04g0551700 Oryza sativa ssp. japonica HOM05D006988 ORTHO05D008731 1.2e-59 233.8 210 55.2
Ah.16g110010 Amaranthus hybridus HOM05D006988 ORTHO05D008731 1.3e-58 230.3 174 68.4
Zm00001eb257570 Zea mays HOM05D006988 ORTHO05D008731 3.9e-58 228.8 173 63.0
SMO367G0814 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 5.1e-58 228.4 173 60.1
SMO367G0459 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 2.5e-57 226.1 173 59.5
MSTRG.20719 Avicennia marina HOM05D006988 ORTHO05D008731 1.6e-56 223.4 184 66.3
Sc23g0003890 Simmondsia chinensis HOM05D006988 ORTHO05D008731 6.3e-56 221.5 167 66.5
Psat3g157120 Pisum sativum HOM05D006988 ORTHO05D008731 2.7e-51 206.1 135 77.0
vmacro13459 Vaccinium macrocarpon HOM05D006988 ORTHO05D008731 2.2e-45 186.4 151 66.9
Thhalv10028565m.g Eutrema salsugineum HOM05D000447 ORTHO05D000315 5.5e-44 181.8 137 67.2
BcaC03g13893 Brassica carinata HOM05D006988 ORTHO05D008731 9.7e-41 171.0 209 46.4
SMO367G0117 Selaginella moellendorffii HOM05D012767 ORTHO05D008731 3.7e-40 169.1 183 48.6
C03p91270 Brassica napus HOM05D006988 ORTHO05D008731 9.1e-39 164.5 123 67.5
AagrBONN_evm.TU.Sc2ySwM_362.1347 Anthoceros agrestis HOM05D006988 ORTHO05D008731 2.2e-37 159.8 139 57.6
Cre14.g618050 Chlamydomonas reinhardtii HOM05D006988 ORTHO05D008731 1.9e-36 156.8 176 48.3
C02p10970 Brassica napus HOM05D006988 ORTHO05D008731 6.7e-34 148.3 85 77.6
BolC2t07167H Brassica oleracea HOM05D006988 ORTHO05D008731 2.0e-33 146.7 85 76.5
PRCOL_00005443 Prasinoderma coloniale HOM05D006988 ORTHO05D008731 4.8e-32 142.1 231 37.7
BcaC01g03084 Brassica carinata HOM05D006988 ORTHO05D008731 1.5e-28 130.6 170 42.9
MCO12G266 Micromonas commoda HOM05D006988 ORTHO05D008731 1.2e-25 120.9 175 41.1
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 5.4e-23 112.1 87 69.0
Lalb_Chr19g0127481 Lupinus albus HOM05D006988 ORTHO05D008731 1.6e-22 110.5 55 83.6
unitig_26.g9723 Utricularia gibba HOM05D000502 ORTHO05D000356 1.9e-20 103.6 110 50.9
A09p00790 Brassica napus HOM05D006988 ORTHO05D008731 7.2e-20 101.7 117 53.8
Actinidia12175 Actinidia chinensis HOM05D006988 ORTHO05D008731 1.3e-16 90.9 82 53.7
BolC3t17906H Brassica oleracea HOM05D001199 ORTHO05D001013 5.9e-14 82.0 62 62.9
Dinv13821 Davidia involucrata HOM05D006988 ORTHO05D008731 1.7e-13 80.5 65 66.2
C03p56160 Brassica napus HOM05D001199 ORTHO05D001013 1.5e-12 77.4 64 60.9
Lalb_Chr19g0127491 Lupinus albus HOM05D006988 ORTHO05D008731 1.8e-10 70.5 83 51.8
Actinidia22773 Actinidia chinensis HOM05D006988 ORTHO05D008731 2.0e-09 67.0 34 82.4
HPP92_016149 Vanilla planifolia HOM05D005663 ORTHO05D007258 8.3e-08 61.6 141 27.0
Haze_25195 Corylus avellana HOM05D005663 ORTHO05D007258 1.1e-07 61.2 141 29.8
RcHm_v2.0_Chr1g0348661 Rosa chinensis HOM05D006988 ORTHO05D008731 1.1e-07 61.2 33 78.8
Potri.003G020700 Populus trichocarpa HOM05D003483 ORTHO05D004101 1.8e-07 60.5 180 28.3
Cre03.g188650 Chlamydomonas reinhardtii HOM05D003483 ORTHO05D004101 4.1e-07 59.3 194 27.3
Haze_25187 Corylus avellana HOM05D005663 ORTHO05D007258 5.4e-07 58.9 141 29.1
SEGI_39378 Sequoiadendron giganteum HOM05D005663 ORTHO05D007258 7.0e-07 58.5 152 27.0
Mapoly0058s0022 Marchantia polymorpha HOM05D005663 ORTHO05D007258 9.2e-07 58.2 192 26.6
QL06p051868 Quercus lobata HOM05D005663 ORTHO05D007258 2.0e-06 57.0 105 29.5
Duzib264G0763 Durio zibethinus HOM05D005663 ORTHO05D007258 2.7e-06 56.6 109 27.5
Aqoxy3G02633 Aquilegia oxysepala HOM05D005663 ORTHO05D007258 7.8e-06 55.1 141 27.7


User provided reference genes

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