Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 1.5e-113 412.9 210 100.0
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 1.5e-102 376.3 210 85.7
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 1.4e-95 353.2 210 82.4
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 6.2e-72 274.6 213 61.0
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 8.3e-69 264.2 209 65.1
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 1.2e-67 260.4 209 63.2
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 6.0e-67 258.1 209 63.6
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 6.0e-67 258.1 209 63.6
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 1.9e-65 253.1 209 59.8
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 2.5e-65 252.7 215 58.1
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 1.2e-64 250.4 211 60.2
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 2.8e-64 249.2 210 64.8
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 2.8e-64 249.2 210 64.8
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 8.1e-64 247.7 212 60.4
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 1.8e-63 246.5 214 59.8
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 2.6e-62 242.7 213 58.7
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 5.4e-60 235.0 216 52.8
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 7.1e-60 234.6 216 52.8
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.1e-59 233.0 216 52.8
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 3.0e-58 229.2 212 58.5
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 5.1e-58 228.4 211 55.9
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 5.6e-57 224.9 219 54.8
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 7.3e-57 224.6 222 56.3
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.8e-56 221.9 211 56.9
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 6.2e-56 221.5 204 59.8
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 1.1e-55 220.7 227 51.1
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.8e-55 219.9 213 52.1
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.8e-55 219.9 213 52.1
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 5.3e-55 218.4 213 54.0
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 9.0e-55 217.6 210 52.9
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 1.2e-54 217.2 211 54.0
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 1.5e-54 216.9 205 56.6
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.6e-54 216.1 213 51.2
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 2.6e-54 216.1 212 56.1
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 3.4e-54 215.7 211 58.8
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 9.9e-54 214.2 209 53.6
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 9.9e-54 214.2 204 55.9
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 2.2e-53 213.0 212 52.8
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 2.9e-53 212.6 209 51.2
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 2.9e-53 212.6 212 54.7
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 6.4e-53 211.5 212 57.5
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 6.4e-53 211.5 211 58.8
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 1.1e-52 210.7 209 52.6
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 5.4e-52 208.4 226 51.8
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 5.4e-52 208.4 206 53.4
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 1.2e-51 207.2 216 51.4
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 2.7e-51 206.1 209 50.7
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 5.1e-50 201.8 212 53.8
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 8.7e-50 201.1 207 52.2
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 1.1e-49 200.7 207 48.8
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 1.5e-49 200.3 211 51.2
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 5.6e-49 198.4 211 51.7
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 9.6e-49 197.6 214 46.7
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.3e-48 197.2 204 48.5
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 2.8e-48 196.1 204 51.0
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 4.8e-48 195.3 201 49.8
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 6.2e-48 194.9 212 50.5
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 2.4e-47 193.0 198 52.5
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 2.4e-47 193.0 160 59.4
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 3.1e-47 192.6 204 48.5
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 9.0e-47 191.0 205 51.7
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 2.6e-46 189.5 199 48.7
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 6.4e-45 184.9 205 47.3
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 4.2e-44 182.2 204 47.5
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 7.1e-44 181.4 203 47.8
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 9.3e-44 181.0 208 46.6
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 6.0e-43 178.3 206 50.0
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 6.0e-43 178.3 205 47.8
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 1.3e-42 177.2 209 44.0
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 1.9e-41 173.3 201 47.8
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 2.5e-41 172.9 212 46.7
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 5.6e-41 171.8 238 43.7
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 5.6e-41 171.8 204 45.1
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 8.1e-40 167.9 217 44.2
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 5.8e-38 161.8 218 40.4
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 1.7e-37 160.2 211 41.2
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 1.9e-36 156.8 218 42.7
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 5.5e-36 155.2 232 40.5
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 5.5e-36 155.2 210 42.4
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 5.5e-36 155.2 214 44.4
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 4.6e-35 152.1 222 42.8
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 4.6e-35 152.1 192 45.8
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.0e-34 151.0 209 44.5
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 1.5e-33 147.1 172 50.0
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 2.5e-33 146.4 209 44.0
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.5e-33 146.4 221 40.7
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.3e-32 144.1 213 46.0
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 2.8e-32 142.9 169 48.5
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 4.1e-31 139.0 199 43.7
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 6.9e-31 138.3 140 47.9
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 9.0e-31 137.9 207 38.2
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 1.2e-30 137.5 203 41.4
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 1.5e-30 137.1 209 39.7
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 2.0e-30 136.7 159 46.5
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 7.6e-30 134.8 203 41.4
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 8.4e-29 131.3 203 41.4
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 1.4e-28 130.6 201 41.3
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 5.5e-28 128.6 199 41.7
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 5.5e-28 128.6 199 41.7
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 1.6e-27 127.1 203 40.4
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 2.7e-27 126.3 204 40.2
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 2.7e-27 126.3 214 39.3
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 4.6e-27 125.6 203 40.9
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 2.3e-26 123.2 197 42.1
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 3.0e-26 122.9 188 43.1
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 3.0e-26 122.9 215 45.1
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 3.0e-26 122.9 215 45.1
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 3.0e-26 122.9 218 41.7
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 3.9e-26 122.5 102 54.9
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 6.7e-26 121.7 204 40.2
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 1.1e-25 120.9 217 44.7
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 2.2e-24 116.7 219 37.0
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 1.1e-20 104.4 101 55.4
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.5e-20 103.2 159 42.1
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 2.1e-19 100.1 147 40.8
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 3.6e-19 99.4 208 33.7
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 1.1e-15 87.8 115 50.4
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.4e-10 70.9 161 31.7
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 8.8e-10 68.2 161 32.3
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 1.5e-09 67.4 236 25.0
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 5.7e-09 65.5 92 42.4
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 7.4e-09 65.1 188 32.4
Os09g0460100 Oryza sativa ssp. japonica HOM05D006157 ORTHO05D007826 1.8e-07 60.5 216 29.2
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 1.2e-06 57.8 153 31.4


User provided reference genes

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