Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 2.9e-122 442.2 270 100.0
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 6.4e-114 414.5 263 78.3
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 5.8e-99 364.8 263 86.3
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 3.8e-98 362.1 264 85.2
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 4.9e-98 361.7 262 86.3
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 6.5e-98 361.3 259 68.0
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 1.4e-97 360.1 258 68.6
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 1.9e-97 359.8 259 85.7
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 3.2e-97 359.0 263 84.4
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 5.5e-97 358.2 263 66.5
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 5.5e-97 358.2 263 65.4
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 7.1e-97 357.8 261 84.7
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 9.3e-97 357.5 258 86.4
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 1.2e-96 357.1 263 85.6
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 2.1e-96 356.3 261 85.8
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 2.1e-96 356.3 259 84.2
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 2.7e-96 355.9 259 66.4
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 4.6e-96 355.1 257 81.7
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 4.6e-96 355.1 263 71.5
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 6.0e-96 354.8 261 87.0
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 6.0e-96 354.8 261 72.8
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 1.0e-95 354.0 260 66.2
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 1.0e-95 354.0 263 81.0
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 1.3e-95 353.6 263 84.0
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 1.8e-95 353.2 263 83.7
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 3.0e-95 352.4 258 84.9
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 3.9e-95 352.1 261 83.9
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 3.9e-95 352.1 263 83.7
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 8.7e-95 350.9 263 68.8
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 1.5e-94 350.1 262 82.4
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.5e-94 350.1 261 83.5
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.9e-94 349.7 263 81.0
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 1.9e-94 349.7 258 67.1
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 2.5e-94 349.4 258 64.3
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 2.5e-94 349.4 258 84.9
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 3.3e-94 349.0 263 82.5
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 4.3e-94 348.6 263 65.0
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 9.6e-94 347.4 263 65.4
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 1.3e-93 347.1 263 81.7
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 1.3e-93 347.1 263 82.9
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 2.1e-93 346.3 258 80.2
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 2.8e-93 345.9 258 82.6
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 3.7e-93 345.5 263 78.3
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 6.2e-93 344.7 263 81.0
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 6.2e-93 344.7 263 81.4
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 8.2e-93 344.4 260 80.4
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 1.1e-92 344.0 263 81.7
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 1.8e-92 343.2 265 64.2
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.8e-92 343.2 263 73.0
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 4.1e-92 342.0 256 63.7
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 5.3e-92 341.7 259 68.0
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 6.9e-92 341.3 263 81.4
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 9.0e-92 340.9 263 63.5
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 1.2e-91 340.5 259 82.2
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 1.5e-91 340.1 258 64.7
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 2.0e-91 339.7 258 63.6
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 2.6e-91 339.3 258 81.4
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 5.8e-91 338.2 262 81.3
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 5.8e-91 338.2 263 79.5
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 7.6e-91 337.8 263 81.7
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 7.6e-91 337.8 263 79.5
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 1.3e-90 337.0 263 79.5
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 1.3e-90 337.0 260 65.0
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.3e-90 337.0 263 81.7
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.3e-90 337.0 263 81.7
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 1.3e-90 337.0 259 61.8
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 1.7e-90 336.7 263 80.2
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 2.9e-90 335.9 261 63.2
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 8.4e-90 334.3 263 79.1
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 1.1e-89 334.0 263 79.8
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 2.5e-89 332.8 260 61.5
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 3.2e-89 332.4 264 71.2
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 9.3e-89 330.9 257 71.2
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 1.6e-88 330.1 257 79.4
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.1e-88 329.7 257 79.8
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.7e-88 329.3 262 60.7
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.7e-88 329.3 257 79.4
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 4.6e-88 328.6 302 67.9
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 4.6e-88 328.6 257 79.8
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 7.9e-88 327.8 264 67.4
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.8e-87 326.6 246 66.7
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 3.0e-87 325.9 270 76.7
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 8.7e-87 324.3 264 78.4
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.9e-86 323.2 264 77.3
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 2.2e-85 319.7 264 59.1
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 1.1e-84 317.4 264 58.7
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 1.4e-84 317.0 264 59.1
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 3.1e-84 315.8 264 58.3
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 3.1e-84 315.8 172 84.3
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 4.1e-84 315.5 264 58.3
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.1e-84 315.5 257 77.0
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 4.1e-84 315.5 249 82.3
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 1.5e-83 313.5 268 74.6
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 3.4e-83 312.4 171 84.8
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 3.4e-83 312.4 260 57.7
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 5.9e-83 311.6 172 82.0
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 3.2e-81 305.8 172 80.8
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 5.5e-81 305.1 259 57.1
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 6.1e-80 301.6 261 55.9
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 2.3e-79 299.7 247 78.1
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 3.9e-79 298.9 256 76.2
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 2.6e-75 286.2 173 75.1
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 2.7e-72 276.2 260 51.9
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 3.3e-70 269.2 270 53.7
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 6.3e-69 265.0 256 69.5
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 7.0e-68 261.5 260 68.1
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 5.0e-66 255.4 243 70.0
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 4.2e-65 252.3 228 55.3
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.2e-56 224.2 138 75.4
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.0e-51 206.8 124 72.6
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 1.9e-49 200.3 126 73.0
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 1.4e-47 194.1 316 33.9
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 1.4e-44 184.1 268 44.8
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.1e-41 174.5 94 81.9
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 1.2e-35 154.5 113 62.8
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 1.5e-30 137.5 135 54.1
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 6.6e-18 95.5 87 60.9
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 7.3e-17 92.0 83 51.8
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.5e-09 67.8 42 66.7
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 4.7e-08 62.8 40 75.0
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 7.6e-06 55.5 61 44.3


User provided reference genes

Program Settings