Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 8.8e-171 603.6 317 100.0
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 4.4e-162 574.7 316 94.3
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 2.7e-156 555.4 316 89.2
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 1.5e-138 496.5 328 83.2
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 1.1e-133 480.3 325 80.0
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 2.9e-129 465.7 324 72.5
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 6.4e-129 464.5 328 73.2
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 8.3e-129 464.2 325 73.2
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 1.1e-128 463.8 322 71.7
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 3.2e-128 462.2 324 72.8
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 4.1e-128 461.8 324 71.6
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 9.2e-128 460.7 321 72.9
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 1.2e-127 460.3 322 72.4
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 1.2e-127 460.3 327 76.1
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 2.0e-127 459.5 324 71.9
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 3.5e-127 458.8 326 74.5
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 3.9e-126 455.3 322 71.7
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 2.5e-125 452.6 322 71.1
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 3.6e-124 448.7 323 73.1
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 3.6e-124 448.7 323 73.1
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 8.0e-124 447.6 319 70.5
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 4.0e-123 445.3 322 75.5
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 8.9e-123 444.1 322 74.2
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.5e-122 443.4 319 68.7
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 2.0e-122 443.0 321 72.6
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 2.6e-122 442.6 324 72.2
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 2.6e-122 442.6 317 70.0
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 2.6e-122 442.6 323 73.1
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 2.6e-122 442.6 320 70.9
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 3.4e-122 442.2 325 74.2
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 3.4e-122 442.2 320 70.6
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 4.4e-122 441.8 325 73.5
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 5.8e-122 441.4 322 70.8
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 7.5e-122 441.0 322 74.8
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 7.5e-122 441.0 320 73.1
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 9.8e-122 440.7 322 74.2
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 1.3e-121 440.3 326 73.9
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 1.7e-121 439.9 320 74.7
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 1.7e-121 439.9 323 73.1
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 2.9e-121 439.1 326 73.6
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 4.9e-121 438.3 325 69.8
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 6.4e-121 438.0 320 69.7
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 6.4e-121 438.0 330 69.7
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 6.4e-121 438.0 317 70.3
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 1.4e-120 436.8 323 72.8
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 1.4e-120 436.8 327 69.4
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 2.4e-120 436.0 323 68.7
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 4.1e-120 435.3 321 69.8
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 7.0e-120 434.5 321 70.7
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 9.2e-120 434.1 323 69.7
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 9.2e-120 434.1 325 70.5
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.2e-119 433.7 329 71.7
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 2.0e-119 433.0 323 69.3
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 3.5e-119 432.2 324 68.5
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 4.6e-119 431.8 322 69.9
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 6.0e-119 431.4 320 68.8
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.0e-118 430.6 321 70.1
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 1.7e-118 429.9 321 69.8
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.7e-118 429.9 321 70.1
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 3.0e-118 429.1 324 68.2
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 3.0e-118 429.1 318 70.8
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 3.9e-118 428.7 324 68.2
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 3.9e-118 428.7 320 69.1
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 5.0e-118 428.3 321 71.0
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 6.6e-118 427.9 320 71.2
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 8.6e-118 427.6 346 66.2
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 8.6e-118 427.6 330 70.0
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 1.1e-117 427.2 330 67.9
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.9e-117 426.4 262 79.4
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 2.5e-117 426.0 319 67.1
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 2.5e-117 426.0 321 69.5
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 3.3e-117 425.6 322 70.5
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 3.3e-117 425.6 322 66.8
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 4.3e-117 425.2 262 79.0
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 5.6e-117 424.9 322 69.6
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 7.3e-117 424.5 329 69.3
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 9.5e-117 424.1 325 71.1
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 9.5e-117 424.1 324 67.3
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 1.2e-116 423.7 322 69.3
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.2e-116 423.7 326 71.8
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.6e-116 423.3 322 67.7
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 1.6e-116 423.3 321 66.4
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.6e-116 423.3 317 68.5
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 3.6e-116 422.2 323 68.7
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 8.1e-116 421.0 323 66.9
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 1.1e-115 420.6 323 66.3
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.4e-115 420.2 318 69.5
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 2.3e-115 419.5 324 67.0
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 4.0e-115 418.7 262 77.9
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 8.9e-115 417.5 316 68.4
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 3.4e-114 415.6 345 65.2
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 4.4e-114 415.2 264 75.0
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 4.4e-114 415.2 321 68.5
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 9.8e-114 414.1 357 61.9
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 1.4e-112 410.2 318 68.6
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 1.9e-112 409.8 264 74.2
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 3.2e-112 409.1 326 66.9
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 7.1e-112 407.9 317 66.2
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 3.9e-110 402.1 384 56.8
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 9.5e-109 397.5 277 70.4
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 1.4e-107 393.7 263 73.0
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 8.9e-107 391.0 264 72.3
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 5.8e-106 388.3 263 71.9
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 2.1e-103 379.8 497 46.5
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 1.1e-101 374.0 323 62.5
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 4.7e-100 368.6 284 66.5
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.9e-97 359.4 191 94.8
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 1.7e-94 350.1 324 60.5
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 3.8e-81 305.8 182 84.1
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 1.1e-80 304.3 259 56.0
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 1.4e-80 303.9 263 56.3
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-80 303.5 199 76.4
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 1.6e-76 290.4 175 81.1
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 2.8e-76 289.7 167 85.0
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 1.8e-75 287.0 175 81.7
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 6.5e-73 278.5 167 82.0
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 5.3e-67 258.8 202 64.4
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 3.7e-52 209.5 122 85.2
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.1e-48 198.0 186 60.8
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.5e-48 196.8 131 74.0
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 3.2e-48 196.4 163 59.5
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.0e-46 191.4 119 78.2
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 1.1e-45 188.0 121 75.2
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 3.3e-45 186.4 216 55.1
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.2e-42 177.9 113 76.1
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 8.8e-38 161.8 121 70.2
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 3.1e-35 153.3 97 80.4
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.2e-29 134.8 152 56.6
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 8.8e-22 108.6 73 72.6
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 2.6e-13 80.5 133 41.4
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 2.9e-12 77.0 157 34.4
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 2.4e-11 73.9 55 63.6
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 2.7e-10 70.5 173 28.3
Cre09.g386747 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 2.3e-09 67.4 180 33.3
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 2.3e-09 67.4 157 33.1
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 1.6e-07 61.2 158 32.3
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 2.1e-07 60.8 50 60.0
PRCOL_00003044 Prasinoderma coloniale HOM05D024924 ORTHO05D006483 1.8e-06 57.8 152 30.9
Cre09.g386756 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 3.1e-06 57.0 178 28.7
MCO17G075 Micromonas commoda HOM05D051517 ORTHO05D006483 8.9e-06 55.5 175 26.3


User provided reference genes

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