Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G014000 Populus trichocarpa HOM05D001756 ORTHO05D001581 7.4e-23 110.2 77 100.0
Potri.002G116300 Populus trichocarpa HOM05D001756 ORTHO05D001581 3.4e-12 74.7 77 57.1
Sabra02G0091600 Salix brachista HOM05D001756 ORTHO05D001581 1.1e-10 69.7 77 58.4
Actinidia34539 Actinidia chinensis HOM05D001756 ORTHO05D001581 2.7e-09 65.1 84 46.4
CSS0048145 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 4.6e-09 64.3 79 49.4
Glyma.14G089063 Glycine max HOM05D001756 ORTHO05D001581 6.1e-09 63.9 77 49.4
Actinidia11965 Actinidia chinensis HOM05D001756 ORTHO05D001581 2.3e-08 62.0 84 46.4
TAR628G0014 Trochodendron aralioides HOM05D001756 ORTHO05D001581 6.7e-08 60.5 82 46.3
Dinv44936 Davidia involucrata HOM05D001756 ORTHO05D001581 2.0e-07 58.9 77 48.1
Glyma.17G233500 Glycine max HOM05D001756 ORTHO05D001581 2.0e-07 58.9 77 48.1
Thecc.08G085400 Theobroma cacao HOM05D001756 ORTHO05D001581 3.3e-07 58.2 77 46.8
QL12p038416 Quercus lobata HOM05D001756 ORTHO05D001581 4.4e-07 57.8 81 44.4
COL.COLO4_28472 Corchorus olitorius HOM05D001756 ORTHO05D001581 5.7e-07 57.4 77 44.2
Gohir.D06G022100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 5.7e-07 57.4 77 46.8
Gorai.010G026700 Gossypium raimondii HOM05D001756 ORTHO05D001581 5.7e-07 57.4 77 46.8
Duzib116G0348 Durio zibethinus HOM05D001756 ORTHO05D001581 7.4e-07 57.0 77 46.8
Duzib093G0345 Durio zibethinus HOM05D001756 ORTHO05D001581 1.3e-06 56.2 83 45.8
Rhsim10G0094800 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.3e-06 56.2 83 43.4
Cpa.g.c33491 Carica papaya HOM05D001756 ORTHO05D001581 1.7e-06 55.8 80 46.2
Dinv23040 Davidia involucrata HOM05D001756 ORTHO05D001581 1.7e-06 55.8 84 41.7
Prupe.1G420000 Prunus persica HOM05D001756 ORTHO05D001581 2.2e-06 55.5 85 44.7
Glyma.17G233400 Glycine max HOM05D001756 ORTHO05D001581 2.8e-06 55.1 75 48.0
Gohir.A06G025000 Gossypium hirsutum HOM05D001756 ORTHO05D001581 2.8e-06 55.1 77 45.5
Lj5g0015089 Lotus japonicus HOM05D001756 ORTHO05D001581 2.8e-06 55.1 76 47.4
RhsimUnG0041200 Rhododendron simsii HOM05D001756 ORTHO05D001581 3.7e-06 54.7 81 44.4
RhsimUnG0123200 Rhododendron simsii HOM05D001756 ORTHO05D001581 3.7e-06 54.7 81 44.4
Lj4A164T42 Lonicera japonica HOM05D001756 ORTHO05D001581 4.8e-06 54.3 82 42.7
CiPaw.02G001200 Carya illinoinensis HOM05D001756 ORTHO05D001581 6.3e-06 53.9 85 40.0
Dinv09540 Davidia involucrata HOM05D001756 ORTHO05D001581 6.3e-06 53.9 81 44.4
Dinv26955 Davidia involucrata HOM05D001756 ORTHO05D001581 8.2e-06 53.5 86 43.0
Potri.014G006900 Populus trichocarpa HOM05D001756 ORTHO05D001581 8.2e-06 53.5 81 42.0
vmacro01948 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 8.2e-06 53.5 77 44.2


User provided reference genes

Program Settings