Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G013500 Populus trichocarpa HOM05D005471 ORTHO05D006170 1.1e-167 593.2 294 100.0
Sabra14G0008300 Salix brachista HOM05D005471 ORTHO05D006170 1.2e-137 493.4 292 86.6
Manes.18G048900 Manihot esculenta HOM05D005471 ORTHO05D006170 5.9e-121 438.0 269 80.7
Dinv44934 Davidia involucrata HOM05D005471 ORTHO05D006170 2.9e-120 435.6 269 77.7
Hma1.2p1_1170F.1_g263420 Hydrangea macrophylla HOM05D005471 ORTHO05D006170 1.5e-119 433.3 273 78.4
Atru.chr13.864 Acer truncatum HOM05D005471 ORTHO05D006170 1.9e-119 433.0 269 79.2
GSVIVG01009307001 Vitis vinifera HOM05D005471 ORTHO05D006170 5.5e-119 431.4 270 79.6
Ciclev10001411m.g Citrus clementina HOM05D005471 ORTHO05D006170 1.0e-117 427.2 269 77.7
Manes.05G183100 Manihot esculenta HOM05D005471 ORTHO05D006170 3.4e-116 422.2 269 78.4
Nn5g30656 Nelumbo nucifera HOM05D005471 ORTHO05D006170 7.5e-116 421.0 270 77.0
Gohir.D06G022300 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.7e-115 419.9 273 76.9
Gorai.010G026900 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.7e-115 419.9 273 76.9
Glyma.06G048400 Glycine max HOM05D005471 ORTHO05D006170 6.3e-115 417.9 288 72.9
Thecc.08G085200 Theobroma cacao HOM05D005471 ORTHO05D006170 1.1e-114 417.2 273 76.2
Cfa013748 Carpinus fangiana HOM05D005471 ORTHO05D006170 2.4e-114 416.0 284 75.0
CsaV3_2G025960 Cucumis sativus L. HOM05D005471 ORTHO05D006170 3.1e-114 415.6 269 75.5
Lalb_Chr11g0063001 Lupinus albus HOM05D005471 ORTHO05D006170 3.1e-114 415.6 269 75.5
Medtr3g103350 Medicago truncatula HOM05D005471 ORTHO05D006170 3.1e-114 415.6 269 76.6
Gohir.A06G025200 Gossypium hirsutum HOM05D005471 ORTHO05D006170 5.4e-114 414.8 273 76.2
Sed0019663 Sechium edule HOM05D005471 ORTHO05D006170 5.4e-114 414.8 285 72.6
ClCG08G016670 Citrullus lanatus HOM05D005471 ORTHO05D006170 9.1e-114 414.1 269 75.5
TPR.G30210 Trifolium pratense HOM05D005471 ORTHO05D006170 1.2e-113 413.7 271 75.3
MELO3C010789.2 Cucumis melo HOM05D005471 ORTHO05D006170 2.0e-113 412.9 269 75.1
Eucgr.F02230 Eucalyptus grandis HOM05D005471 ORTHO05D006170 7.7e-113 411.0 269 74.7
MD15G1065900 Malus domestica HOM05D005471 ORTHO05D006170 1.0e-112 410.6 271 74.5
Prupe.1G419800 Prunus persica HOM05D005471 ORTHO05D006170 1.0e-112 410.6 269 75.8
COL.COLO4_28470 Corchorus olitorius HOM05D005471 ORTHO05D006170 2.2e-112 409.5 275 74.9
Lalb_Chr08g0245201 Lupinus albus HOM05D005471 ORTHO05D006170 2.2e-112 409.5 269 74.7
Lj1g0028245 Lotus japonicus HOM05D005471 ORTHO05D006170 3.8e-112 408.7 269 76.2
MD08G1078900 Malus domestica HOM05D005471 ORTHO05D006170 6.5e-112 407.9 271 73.8
FvH4_2g32730 Fragaria vesca HOM05D005471 ORTHO05D006170 1.1e-111 407.1 269 77.7
Phvul.009G073700 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 2.1e-110 402.9 269 74.0
FAN24G0217 Fragaria x ananassa HOM05D005471 ORTHO05D006170 2.7e-110 402.5 272 76.8
FAN20G2694 Fragaria x ananassa HOM05D005471 ORTHO05D006170 1.4e-109 400.2 272 76.8
Gohir.A05G211700 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.4e-109 400.2 285 72.3
Gorai.009G221700 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.4e-109 400.2 285 72.3
CSS0040686 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 1.8e-109 399.8 270 73.3
TWI12G0997 Tripterygium wilfordii HOM05D005471 ORTHO05D006170 2.3e-109 399.4 272 73.2
Thhalv10023553m.g Eutrema salsugineum HOM05D005471 ORTHO05D006170 4.0e-109 398.7 271 72.0
CiPaw.07G172600 Carya illinoinensis HOM05D005471 ORTHO05D006170 5.2e-109 398.3 284 72.5
Gohir.D05G215000 Gossypium hirsutum HOM05D005471 ORTHO05D006170 6.8e-109 397.9 285 71.9
FAN15G0642 Fragaria x ananassa HOM05D005471 ORTHO05D006170 8.8e-109 397.5 272 76.1
Aqoxy6G02473 Aquilegia oxysepala HOM05D005471 ORTHO05D006170 1.2e-108 397.1 271 73.1
HanXRQChr09g0254061 Helianthus annuus HOM05D005471 ORTHO05D006170 2.2e-107 392.9 269 71.0
Psat5g045040 Pisum sativum HOM05D005471 ORTHO05D006170 2.8e-107 392.5 269 72.5
Carub.0002s0591 Capsella rubella HOM05D005471 ORTHO05D006170 3.7e-107 392.1 270 71.5
CARHR283850 Cardamine hirsuta HOM05D005471 ORTHO05D006170 3.7e-107 392.1 270 71.1
Sc02g0008090 Simmondsia chinensis HOM05D005471 ORTHO05D006170 3.7e-107 392.1 269 69.9
arahy.Tifrunner.gnm1.ann1.F72CPE Arachis hypogaea HOM05D005471 ORTHO05D006170 1.1e-106 390.6 270 73.0
ECA232G3342 Erigeron canadensis HOM05D005471 ORTHO05D006170 1.1e-106 390.6 270 72.2
EL10Ac1g02354 Beta vulgaris HOM05D005471 ORTHO05D006170 2.4e-106 389.4 270 69.3
CSS0038926 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 2.4e-106 389.4 298 66.4
AT1G59520 Arabidopsis thaliana HOM05D005471 ORTHO05D006170 3.1e-106 389.0 270 70.4
MBI16_g27035_MAGBIO Magnolia biondii HOM05D005471 ORTHO05D006170 4.1e-106 388.7 285 69.1
FAN27G0342 Fragaria x ananassa HOM05D005471 ORTHO05D006170 5.4e-106 388.3 286 72.4
arahy.Tifrunner.gnm1.ann1.P8GEK4 Arachis hypogaea HOM05D005471 ORTHO05D006170 9.2e-106 387.5 296 66.9
PGSC0003DMG400004915 Solanum tuberosum HOM05D005471 ORTHO05D006170 9.2e-106 387.5 269 71.0
Solyc04g077560.3 Solanum lycopersicum HOM05D005471 ORTHO05D006170 5.9e-105 384.8 269 70.3
Sopen04g031200 Solanum pennellii HOM05D005471 ORTHO05D006170 5.9e-105 384.8 269 70.3
A01p28660 Brassica napus HOM05D005471 ORTHO05D006170 1.3e-104 383.6 271 69.7
Cpa.g.sc142.57 Carica papaya HOM05D005471 ORTHO05D006170 1.7e-104 383.3 313 64.9
Dinv39207 Davidia involucrata HOM05D005471 ORTHO05D006170 1.7e-104 383.3 269 70.6
Sp2g05030 Schrenkiella parvula HOM05D005471 ORTHO05D006170 1.7e-104 383.3 271 70.1
HanXRQChr15g0493081 Helianthus annuus HOM05D005471 ORTHO05D006170 2.3e-104 382.9 269 68.4
RcHm_v2.0_Chr6g0309951 Rosa chinensis HOM05D005471 ORTHO05D006170 6.6e-104 381.3 270 73.0
BcaC09g49476 Brassica carinata HOM05D005471 ORTHO05D006170 8.6e-104 380.9 271 69.0
C01p36310 Brassica napus HOM05D005471 ORTHO05D006170 8.6e-104 380.9 271 69.0
ATR0739G016 Amborella trichopoda HOM05D005471 ORTHO05D006170 3.3e-103 379.0 265 70.9
BraA01t03038Z Brassica rapa HOM05D005471 ORTHO05D006170 3.3e-103 379.0 278 68.3
CSS0014765 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 4.3e-103 378.6 269 71.7
QL12p038448 Quercus lobata HOM05D005471 ORTHO05D006170 4.3e-103 378.6 303 64.4
CiPaw.08G051800 Carya illinoinensis HOM05D005471 ORTHO05D006170 7.3e-103 377.9 300 67.7
BolC1t03588H Brassica oleracea HOM05D005471 ORTHO05D006170 9.5e-103 377.5 278 68.0
CDE02G4131 Ceratophyllum demersum HOM05D005471 ORTHO05D006170 1.2e-102 377.1 265 70.6
Migut.C00408 Erythranthe guttata HOM05D005471 ORTHO05D006170 2.1e-102 376.3 270 68.5
Ah.05g166980 Amaranthus hybridus HOM05D005471 ORTHO05D006170 6.1e-102 374.8 276 67.4
Cc10_g07570 Coffea canephora HOM05D005471 ORTHO05D006170 8.0e-102 374.4 270 69.3
PSO675G5405 Papaver somniferum HOM05D005471 ORTHO05D006170 3.0e-101 372.5 269 69.5
PSO541G0412 Papaver somniferum HOM05D005471 ORTHO05D006170 4.0e-101 372.1 269 69.9
THA.LOC104819922 Tarenaya hassleriana HOM05D005471 ORTHO05D006170 4.0e-101 372.1 270 67.8
PSO017G6379 Papaver somniferum HOM05D005471 ORTHO05D006170 6.8e-101 371.3 269 68.0
BcaC09g49477 Brassica carinata HOM05D005471 ORTHO05D006170 1.2e-100 370.5 255 71.0
Duzib093G1789 Durio zibethinus HOM05D005471 ORTHO05D006170 5.7e-100 368.2 260 70.8
MSTRG.25028 Avicennia marina HOM05D005471 ORTHO05D006170 9.8e-100 367.5 270 68.1
Rhsim06G0064300 Rhododendron simsii HOM05D005471 ORTHO05D006170 8.3e-99 364.4 269 67.3
SGA_v2.0_scaffold74G24542 Striga asiatica HOM05D005471 ORTHO05D006170 8.3e-99 364.4 272 66.5
PSO170G6612 Papaver somniferum HOM05D005471 ORTHO05D006170 7.0e-98 361.3 269 66.2
VMungo1309G2773 Vigna mungo HOM05D005471 ORTHO05D006170 9.5e-95 350.9 270 67.0
Gohir.D06G026900 Gossypium hirsutum HOM05D005471 ORTHO05D006170 8.0e-94 347.8 234 74.8
unitig_37.g13113 Utricularia gibba HOM05D005471 ORTHO05D006170 4.0e-93 345.5 278 63.3
Lsat_1_v5_gn_1_56140 Lactuca sativa HOM05D001400 ORTHO05D001795 7.5e-92 341.3 280 62.9
DCAR_019346 Daucus carota HOM05D005471 ORTHO05D006170 3.2e-90 335.9 283 60.1
HPP92_007709 Vanilla planifolia HOM05D005471 ORTHO05D006170 7.8e-89 331.3 270 61.5
Ca_15890_v3 Cicer arietinum L. HOM05D005471 ORTHO05D006170 1.0e-88 330.9 271 64.6
Os07g0248800 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 2.5e-87 326.2 263 62.4
Os10g0102900 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 7.3e-87 324.7 263 62.4
Nitab4.5_0001426g0050 Nicotiana tabacum HOM05D005471 ORTHO05D006170 4.7e-86 322.0 304 56.9
PGR031G3068 Punica granatum HOM05D005471 ORTHO05D006170 2.0e-84 316.6 269 61.0
Aa31LG2G10610 Aethionema arabicum HOM05D005471 ORTHO05D006170 4.4e-84 315.5 286 58.7
Zm00001eb025640 Zea mays HOM05D005471 ORTHO05D006170 4.4e-84 315.5 289 57.4
Glyma.04G047500 Glycine max HOM05D005471 ORTHO05D006170 7.5e-84 314.7 275 61.5
Os04g0183100 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 7.5e-84 314.7 266 59.4
vmacro21421 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 3.7e-83 312.4 294 56.5
Nitab4.5_0002796g0080 Nicotiana tabacum HOM05D005471 ORTHO05D006170 3.3e-79 299.3 286 55.6
Lj4A753G30 Lonicera japonica HOM05D005471 ORTHO05D006170 1.6e-78 297.0 253 62.1
DCAR_020058 Daucus carota HOM05D005471 ORTHO05D006170 8.4e-75 284.6 236 58.5
Lsat_1_v5_gn_2_90520 Lactuca sativa HOM05D005471 ORTHO05D006170 1.6e-73 280.4 269 56.9
BcaB04g20211 Brassica carinata HOM05D005471 ORTHO05D006170 6.0e-73 278.5 271 54.2
Peaxi162Scf00340g00069 Petunia axillaris HOM05D005471 ORTHO05D006170 3.1e-69 266.2 299 50.8
TAR625G0189 Trochodendron aralioides HOM05D005471 ORTHO05D006170 6.9e-69 265.0 179 73.2
Mapoly0067s0099 Marchantia polymorpha HOM05D005471 ORTHO05D006170 3.8e-67 259.2 272 51.8
AUR62035006 Chenopodium quinoa HOM05D005471 ORTHO05D006170 1.2e-65 254.2 281 49.8
AagrBONN_evm.TU.Sc2ySwM_368.1412 Anthoceros agrestis HOM05D005471 ORTHO05D006170 6.6e-64 248.4 271 48.0
Pp3c17_20680 Physcomitrium patens HOM05D005471 ORTHO05D006170 6.6e-64 248.4 269 48.7
Nitab4.5_0006888g0020 Nicotiana tabacum HOM05D005471 ORTHO05D006170 5.3e-61 238.8 265 50.6
Psat5g037200 Pisum sativum HOM05D005471 ORTHO05D006170 2.2e-59 233.4 155 72.3
AUR62037460 Chenopodium quinoa HOM05D005471 ORTHO05D006170 4.9e-59 232.3 243 49.8
CBR_g49495 Chara braunii HOM05D005471 ORTHO05D006170 7.1e-58 228.4 277 45.1
SMO117G0302 Selaginella moellendorffii HOM05D005471 ORTHO05D006170 2.3e-56 223.4 264 45.5
Haze_22399 Corylus avellana HOM05D005471 ORTHO05D006170 2.8e-46 189.9 240 48.3
Haze_22407 Corylus avellana HOM05D005471 ORTHO05D006170 2.2e-43 180.3 254 45.7
SHI08425 Sapria himalayana HOM05D005471 ORTHO05D006170 1.3e-30 137.9 126 58.7
Hund05280 Selenicereus undatus HOM05D005471 ORTHO05D006170 3.8e-27 126.3 99 61.6
Phvul.009G072300 Phaseolus vulgaris HOM05D005471 ORTHO05D000997 4.1e-21 106.3 79 65.8
Gohir.D12G192766 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.3e-19 101.3 73 69.9
Gohir.D04G027975 Gossypium hirsutum HOM05D005471 ORTHO05D006170 2.9e-19 100.1 73 69.9
Gorai.012G030800 Gossypium raimondii HOM05D005471 ORTHO05D006170 8.5e-19 98.6 73 68.5
Gohir.A12G016250 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.1e-18 98.2 73 68.5
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 6.1e-17 92.4 60 73.3
SEGI_08278 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 7.0e-13 79.0 106 41.5
CAN.G213.23 Capsicum annuum HOM05D005471 ORTHO05D006170 1.7e-11 74.3 104 42.3
Cre07.g320250 Chlamydomonas reinhardtii HOM05D005471 ORTHO05D006170 2.0e-07 60.8 151 29.1
Phvul.009G072333 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 3.3e-07 60.1 62 51.6
Peaxi162Scf00448g00027 Petunia axillaris HOM05D005471 ORTHO05D006170 1.3e-06 58.2 58 51.7


User provided reference genes

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