Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G012900 Populus trichocarpa HOM05D005317 ORTHO05D005146 2.9e-88 328.6 170 100.0
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 4.7e-62 241.5 162 77.2
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 2.7e-17 92.8 152 44.1
Thecc.08G084600 Theobroma cacao HOM05D005317 ORTHO05D005146 7.8e-17 91.3 161 41.6
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 3.0e-16 89.4 159 38.4
Manes.05G183600 Manihot esculenta HOM05D005317 ORTHO05D005146 8.7e-16 87.8 142 42.3
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 1.6e-14 83.6 167 38.9
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 6.2e-14 81.6 151 45.0
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.1e-13 80.9 147 37.4
Gohir.D01G111432 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.4e-13 80.5 147 37.4
Gohir.D06G022800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.4e-13 80.5 156 39.7
Gorai.010G027400 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.4e-13 80.5 156 39.7
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.8e-13 80.1 146 37.7
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 3.1e-13 79.3 155 41.9
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 6.9e-13 78.2 159 37.7
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 2.0e-12 76.6 154 39.6
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 2.0e-12 76.6 173 36.4
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 5.8e-12 75.1 156 34.6
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 5.8e-12 75.1 159 38.4
Gohir.A06G025700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 7.6e-12 74.7 157 39.5
Atru.chr13.869 Acer truncatum HOM05D011270 ORTHO05D012905 9.9e-12 74.3 159 35.8
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.3e-11 73.9 149 36.9
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 2.2e-11 73.2 145 39.3
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 4.9e-11 72.0 154 33.8
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 4.9e-11 72.0 158 36.7
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 6.4e-11 71.6 118 41.5
Cfa013738 Carpinus fangiana HOM05D005317 ORTHO05D005146 8.4e-11 71.2 154 35.7
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 7.1e-10 68.2 100 40.0
Duzib187G1956 Durio zibethinus HOM05D005317 ORTHO05D005146 1.2e-09 67.4 154 34.4
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.1e-09 66.6 154 35.7
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.1e-09 66.6 154 35.7
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.5e-09 65.9 147 37.4
Gohir.D05G215433 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.5e-09 65.9 127 37.0
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 7.9e-09 64.7 168 35.1
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 7.9e-09 64.7 176 33.5
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 1.3e-08 63.9 152 34.2
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 3.0e-08 62.8 115 39.1
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.1e-08 62.0 149 34.2
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.1e-08 62.0 150 34.7
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 6.7e-08 61.6 128 36.7
Gohir.D05G215300 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.7e-08 61.6 143 32.2
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 6.7e-08 61.6 156 33.3
CiPaw.07G172000 Carya illinoinensis HOM05D005317 ORTHO05D005146 8.7e-08 61.2 151 35.8
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 1.1e-07 60.8 156 32.7
Phvul.009G074100 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 1.5e-07 60.5 144 29.9
Haze_22390 Corylus avellana HOM05D000071 ORTHO05D000029 1.9e-07 60.1 149 35.6
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 1.9e-07 60.1 146 33.6
CiPaw.07G172100 Carya illinoinensis HOM05D005317 ORTHO05D005146 2.5e-07 59.7 146 34.9
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 4.3e-07 58.9 103 40.8
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 4.3e-07 58.9 149 34.2
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 7.4e-07 58.2 150 35.3
Phvul.001G030900 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 9.6e-07 57.8 132 32.6
Actinidia16411 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.3e-06 57.4 153 35.3
Gohir.A05G212000 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.3e-06 57.4 144 32.6
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 1.3e-06 57.4 167 32.3
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.6e-06 57.0 164 32.3
Ciclev10027255m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.6e-06 57.0 116 37.9
MELO3C016839.2 Cucumis melo HOM05D028682 ORTHO05D028988 1.6e-06 57.0 145 31.7
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.1e-06 56.6 158 30.4
Migut.H00325 Erythranthe guttata HOM05D005317 ORTHO05D005146 2.8e-06 56.2 140 33.6
Glyma.17G232800 Glycine max HOM05D014755 ORTHO05D005146 3.7e-06 55.8 142 35.2
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 4.8e-06 55.5 168 31.5
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 6.2e-06 55.1 157 33.1
Glyma.14G089087 Glycine max HOM05D014755 ORTHO05D005146 6.2e-06 55.1 136 30.9
Gorai.002G136100 Gossypium raimondii HOM05D005317 ORTHO05D005146 6.2e-06 55.1 134 35.1
Lj5g0011909 Lotus japonicus HOM05D014755 ORTHO05D005146 6.2e-06 55.1 140 33.6
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 6.2e-06 55.1 149 35.6
Oeu021452.1 Olea europaea HOM05D005317 ORTHO05D005146 6.2e-06 55.1 146 33.6
CsaV3_4G035280 Cucumis sativus L. HOM05D028682 ORTHO05D028988 8.1e-06 54.7 143 32.2
Glyma.06G048800 Glycine max HOM05D014755 ORTHO05D005146 8.1e-06 54.7 150 31.3
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 8.1e-06 54.7 161 29.8


User provided reference genes

Program Settings