Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G012100 Populus trichocarpa HOM05D004917 ORTHO05D005954 8.9e-159 563.5 280 100.0
Sabra14G0006700 Salix brachista HOM05D004917 ORTHO05D005954 3.4e-134 481.9 255 94.5
Atru.chr3.1060 Acer truncatum HOM05D004917 ORTHO05D005954 2.4e-103 379.4 266 72.2
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 4.5e-102 375.2 233 76.8
Thecc.01G076300 Theobroma cacao HOM05D004917 ORTHO05D005954 1.3e-101 373.6 260 72.3
Eucgr.H02332 Eucalyptus grandis HOM05D004917 ORTHO05D005954 2.9e-101 372.5 259 72.6
COL.COLO4_11615 Corchorus olitorius HOM05D004917 ORTHO05D005954 3.2e-100 369.0 261 71.3
Manes.13G109000 Manihot esculenta HOM05D004917 ORTHO05D005954 3.2e-100 369.0 261 71.6
Prupe.6G216800 Prunus persica HOM05D004917 ORTHO05D005954 2.1e-99 366.3 267 69.3
Ciclev10026314m.g Citrus clementina HOM05D004917 ORTHO05D005954 2.7e-99 365.9 260 69.6
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla HOM05D004917 ORTHO05D005954 6.1e-99 364.8 274 68.2
FvH4_1g18250 Fragaria vesca HOM05D004917 ORTHO05D005954 1.0e-98 364.0 263 70.3
Lj4g0024725 Lotus japonicus HOM05D004917 ORTHO05D005954 5.1e-98 361.7 231 75.8
Gorai.008G085700 Gossypium raimondii HOM05D004917 ORTHO05D005954 6.7e-98 361.3 249 71.5
TAR628G1580 Trochodendron aralioides HOM05D004917 ORTHO05D005954 1.1e-97 360.5 261 69.0
GSVIVG01004399001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.5e-97 360.1 265 67.9
PGSC0003DMG400003322 Solanum tuberosum HOM05D004917 ORTHO05D005954 1.9e-97 359.8 244 71.3
Actinidia16409 Actinidia chinensis HOM05D004917 ORTHO05D005954 1.6e-96 356.7 259 69.5
Ca_22095_v3 Cicer arietinum L. HOM05D004917 ORTHO05D005954 1.6e-96 356.7 225 76.4
Cc07_g07360 Coffea canephora HOM05D004917 ORTHO05D005954 4.8e-96 355.1 264 67.4
RcHm_v2.0_Chr2g0108761 Rosa chinensis HOM05D004917 ORTHO05D005954 4.8e-96 355.1 271 67.2
GSVIVG01007444001 Vitis vinifera HOM05D004917 ORTHO05D005954 4.8e-96 355.1 261 67.0
Sopen02g014680 Solanum pennellii HOM05D004917 ORTHO05D005954 6.3e-96 354.8 244 71.3
Psat4g080360 Pisum sativum HOM05D004917 ORTHO05D005954 8.2e-96 354.4 223 74.9
TWI74G1062 Tripterygium wilfordii HOM05D004917 ORTHO05D005954 8.2e-96 354.4 267 65.5
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 8.2e-96 354.4 193 82.9
Eucgr.H02333 Eucalyptus grandis HOM05D004917 ORTHO05D005954 1.1e-95 354.0 210 79.5
Duzib147G0189 Durio zibethinus HOM05D004917 ORTHO05D005954 1.4e-95 353.6 267 67.8
Glyma.17G158500 Glycine max HOM05D004917 ORTHO05D005954 2.4e-95 352.8 200 80.0
Phvul.003G232900 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 2.4e-95 352.8 197 81.2
Cfa004388 Carpinus fangiana HOM05D004917 ORTHO05D005954 5.3e-95 351.7 261 67.0
FAN26G0787 Fragaria x ananassa HOM05D004917 ORTHO05D005954 6.9e-95 351.3 269 66.9
Gohir.D12G076900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 9.0e-95 350.9 228 74.1
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 1.5e-94 350.1 249 68.7
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 2.0e-94 349.7 249 68.3
Sc07g0000430 Simmondsia chinensis HOM05D004917 ORTHO05D005954 2.0e-94 349.7 252 67.5
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 2.6e-94 349.4 258 66.7
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 3.4e-94 349.0 263 67.3
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 4.5e-94 348.6 233 71.7
CAN.G775.1 Capsicum annuum HOM05D004917 ORTHO05D005954 5.9e-94 348.2 256 69.1
Cpa.g.sc673.2 Carica papaya HOM05D004917 ORTHO05D005954 7.7e-94 347.8 258 65.9
Nn5g30667 Nelumbo nucifera HOM05D004917 ORTHO05D005954 7.7e-94 347.8 264 66.3
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.0e-93 347.4 249 67.9
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 1.7e-93 346.7 260 68.8
FAN19G2004 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.2e-93 346.3 252 70.6
FAN23G1748 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.2e-93 346.3 263 67.7
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 3.8e-93 345.5 267 64.0
RcHm_v2.0_Chr2g0108751 Rosa chinensis HOM05D004917 ORTHO05D005954 6.5e-93 344.7 257 69.3
CiPaw.01G001900 Carya illinoinensis HOM05D004917 ORTHO05D005954 1.1e-92 344.0 227 72.2
Medtr4g097500 Medicago truncatula HOM05D004917 ORTHO05D005954 1.1e-92 344.0 229 72.1
Sed0017274 Sechium edule HOM05D004917 ORTHO05D005954 1.9e-92 343.2 225 73.8
Thecc.01G076400 Theobroma cacao HOM05D004917 ORTHO05D005954 2.5e-92 342.8 264 67.0
PSO017G2968 Papaver somniferum HOM05D004917 ORTHO05D005954 7.2e-92 341.3 262 66.8
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea HOM05D004917 ORTHO05D005954 1.2e-91 340.5 262 66.4
FvH4_1g18230 Fragaria vesca HOM05D004917 ORTHO05D005954 1.6e-91 340.1 261 67.4
FAN19G0182 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.6e-91 340.1 261 67.4
CsaV3_2G016370 Cucumis sativus L. HOM05D004917 ORTHO05D005954 2.1e-91 339.7 209 75.1
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 3.6e-91 339.0 231 70.1
Phvul.003G232800 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 3.6e-91 339.0 195 79.0
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 4.6e-91 338.6 264 66.3
MD02G1189600 Malus domestica HOM05D004917 ORTHO05D005954 2.3e-90 336.3 268 63.8
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea HOM05D004917 ORTHO05D005954 1.1e-89 334.0 262 65.6
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 1.1e-89 334.0 260 64.6
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 1.5e-89 333.6 264 62.9
Os03g0729200 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 2.0e-89 333.2 199 75.4
Zm00001eb215580 Zea mays HOM05D004917 ORTHO05D005954 5.7e-89 331.6 186 79.6
DCAR_014953 Daucus carota HOM05D004917 ORTHO05D005954 7.4e-89 331.3 225 71.1
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 9.7e-89 330.9 197 78.2
Lsat_1_v5_gn_4_160020 Lactuca sativa HOM05D004917 ORTHO05D005954 2.2e-88 329.7 230 71.3
PSO170G3850 Papaver somniferum HOM05D004917 ORTHO05D005954 2.8e-88 329.3 262 65.6
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 2.8e-88 329.3 197 75.1
Ah.03g140710 Amaranthus hybridus HOM05D004917 ORTHO05D005954 3.7e-88 328.9 243 68.3
Lalb_Chr11g0075991 Lupinus albus HOM05D004917 ORTHO05D005954 3.7e-88 328.9 231 69.3
FvH4_1g18251 Fragaria vesca HOM05D004917 ORTHO05D005954 4.8e-88 328.6 198 78.8
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 3.1e-87 325.9 197 74.1
AUR62007540 Chenopodium quinoa HOM05D004917 ORTHO05D005954 6.9e-87 324.7 192 77.6
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 1.2e-86 323.9 270 60.0
ECA232G4556 Erigeron canadensis HOM05D004917 ORTHO05D005954 2.6e-86 322.8 249 66.3
AUR62004032 Chenopodium quinoa HOM05D004917 ORTHO05D005954 4.5e-86 322.0 192 76.6
Migut.L00432 Erythranthe guttata HOM05D004917 ORTHO05D005954 4.5e-86 322.0 264 61.7
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 1.3e-85 320.5 269 59.5
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 2.2e-85 319.7 197 74.1
THA.LOC104827747 Tarenaya hassleriana HOM05D004917 ORTHO05D005954 6.5e-85 318.2 269 60.6
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 1.1e-84 317.4 275 59.3
HanXRQChr09g0262071 Helianthus annuus HOM05D004917 ORTHO05D005954 1.1e-84 317.4 241 65.1
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 2.5e-84 316.2 196 74.0
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 4.2e-84 315.5 220 65.0
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 4.2e-84 315.5 220 65.0
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 4.2e-84 315.5 219 65.3
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 4.2e-84 315.5 230 64.8
C09p10750 Brassica napus HOM05D004917 ORTHO05D005954 7.2e-84 314.7 211 67.8
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.2e-83 313.9 260 59.6
BcaC04g23243 Brassica carinata HOM05D004917 ORTHO05D005954 2.1e-83 313.2 190 71.6
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 2.1e-83 313.2 220 64.1
BolC9t53970H Brassica oleracea HOM05D004917 ORTHO05D005954 3.6e-83 312.4 190 71.6
SEGI_14750 Sequoiadendron giganteum HOM05D004917 ORTHO05D005954 4.7e-83 312.0 243 62.1
MELO3C020846.2 Cucumis melo HOM05D004917 ORTHO05D005954 2.3e-82 309.7 208 68.8
Lj4A165T49 Lonicera japonica HOM05D004917 ORTHO05D005954 2.3e-82 309.7 261 63.2
Oeu013341.1 Olea europaea HOM05D004917 ORTHO05D005954 3.0e-82 309.3 157 89.8
SGA_v2.0_scaffold79G25603 Striga asiatica HOM05D004917 ORTHO05D005954 3.9e-82 308.9 216 69.9
FAN28G2407 Fragaria x ananassa HOM05D004917 ORTHO05D005954 5.1e-82 308.5 228 70.2
GSVIVG01007168001 Vitis vinifera HOM05D004917 ORTHO05D005954 6.7e-82 308.1 160 86.2
ClCG02G012210 Citrullus lanatus HOM05D004917 ORTHO05D005954 1.1e-81 307.4 209 71.3
PSO170G4503 Papaver somniferum HOM05D004917 ORTHO05D005954 2.0e-81 306.6 204 73.0
ATR0739G130 Amborella trichopoda HOM05D004917 ORTHO05D005954 2.2e-80 303.1 197 72.1
PSO017G4293 Papaver somniferum HOM05D004917 ORTHO05D005954 2.8e-80 302.8 205 71.2
Haze_15025 Corylus avellana HOM05D004917 ORTHO05D005954 6.3e-80 301.6 275 57.1
DCAR_000455 Daucus carota HOM05D004917 ORTHO05D005954 3.1e-79 299.3 167 80.8
CSS0005558 Camellia sinensis var. sinensis HOM05D004917 ORTHO05D005954 1.2e-78 297.4 249 62.2
RcHm_v2.0_Chr2g0108771 Rosa chinensis HOM05D004917 ORTHO05D005954 1.5e-78 297.0 202 72.8
Nitab4.5_0000036g0150 Nicotiana tabacum HOM05D004917 ORTHO05D005954 2.6e-78 296.2 161 81.4
FAN26G1896 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.5e-76 289.7 263 59.7
Migut.L00430 Erythranthe guttata HOM05D004917 ORTHO05D005954 1.8e-74 283.5 190 69.5
CDE02G4371 Ceratophyllum demersum HOM05D004917 ORTHO05D005954 2.0e-73 280.0 196 64.8
Peaxi162Scf00449g00417 Petunia axillaris HOM05D004917 ORTHO05D005954 3.3e-73 279.3 244 61.9
Dinv26959 Davidia involucrata HOM05D004917 ORTHO05D005954 1.7e-72 276.9 158 80.4
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 4.7e-67 258.8 214 57.9
Nitab4.5_0007379g0030 Nicotiana tabacum HOM05D004917 ORTHO05D005954 2.3e-66 256.5 254 53.9
MBI16_g06077_MAGBIO Magnolia biondii HOM05D004917 ORTHO05D005954 3.1e-63 246.1 266 51.9
Pp3c27_7100 Physcomitrium patens HOM05D004917 ORTHO05D005954 2.7e-62 243.0 237 47.7
Hund16417 Selenicereus undatus HOM05D004917 ORTHO05D005954 1.7e-61 240.4 148 77.0
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 4.5e-54 215.7 241 46.1
unitig_37.g11996 Utricularia gibba HOM05D004917 ORTHO05D005954 1.7e-53 213.8 196 57.1
Zm00001eb056030 Zea mays HOM05D004917 ORTHO05D005954 2.3e-53 213.4 130 72.3
FAN23G2689 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.4e-49 199.5 150 69.3
QL06p038908 Quercus lobata HOM05D004917 ORTHO05D005954 1.7e-48 197.2 102 87.3
GSVIVG01004400001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.9e-48 196.4 103 85.4
ATR0739G160 Amborella trichopoda HOM05D004917 ORTHO05D005954 6.4e-40 168.7 108 70.4
GSVIVG01007167001 Vitis vinifera HOM05D004917 ORTHO05D005954 9.5e-36 154.8 158 53.2
QL02p069743 Quercus lobata HOM05D004917 ORTHO05D005954 4.0e-34 149.4 94 74.5
QL06p038910 Quercus lobata HOM05D004917 ORTHO05D005954 1.5e-33 147.5 91 74.7
FAN28G0406 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.9e-31 140.6 101 67.3
FAN26G2723 Fragaria x ananassa HOM05D004917 ORTHO05D005954 5.4e-31 139.0 197 42.6
Sabra07G0005500 Salix brachista HOM05D004917 ORTHO05D005954 7.6e-25 118.6 151 50.3
Potri.007G007201 Populus trichocarpa HOM05D004917 ORTHO05D005954 6.4e-24 115.5 69 84.1
MCO14G127 Micromonas commoda HOM05D004917 ORTHO05D005954 1.1e-23 114.8 159 37.7
Carub.0004s1915 Capsella rubella HOM05D007024 ORTHO05D008865 2.4e-23 113.6 198 34.8
Lalb_Chr20g0112901 Lupinus albus HOM05D007024 ORTHO05D008865 3.5e-22 109.8 195 33.8
arahy.Tifrunner.gnm1.ann1.F27BB1 Arachis hypogaea HOM05D004917 ORTHO05D005954 4.4e-17 92.8 53 77.4
PRCOL_00004664 Prasinoderma coloniale HOM05D004917 ORTHO05D005954 8.4e-16 88.6 133 37.6
CDE04G0730 Ceratophyllum demersum HOM05D007024 ORTHO05D008865 3.2e-15 86.7 209 31.6
Gohir.A12G080465 Gossypium hirsutum HOM05D004917 ORTHO05D005954 3.2e-15 86.7 94 53.2
TAR633G0628 Trochodendron aralioides HOM05D007024 ORTHO05D008865 4.2e-15 86.3 165 31.5
AagrBONN_evm.TU.Sc2ySwM_344.3825 Anthoceros agrestis HOM05D007024 ORTHO05D008865 2.7e-14 83.6 120 35.0
Zm00001eb030360 Zea mays HOM05D004917 ORTHO05D005954 4.6e-14 82.8 158 37.3
MCO06G061 Micromonas commoda HOM05D004917 ORTHO05D005954 3.3e-12 76.6 131 33.6
Cre17.g697050 Chlamydomonas reinhardtii HOM05D004917 ORTHO05D005954 6.2e-11 72.4 136 36.0
Haze_02356 Corylus avellana HOM05D004917 ORTHO05D005954 4.4e-09 66.2 37 75.7
ATR0739G073 Amborella trichopoda HOM05D004917 ORTHO05D005954 1.3e-08 64.7 111 37.8
MCO07G374 Micromonas commoda HOM05D004917 ORTHO05D005954 2.9e-08 63.5 141 32.6
GSVIVG01007445001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.1e-06 57.4 115 39.1
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 3.5e-06 56.6 99 30.3


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