Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 9.5e-39 163.3 99 100.0
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 2.3e-32 142.1 80 96.2
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 8.6e-32 140.2 82 93.9
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 9.5e-31 136.7 92 79.3
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 9.5e-31 136.7 92 79.3
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 1.2e-30 136.3 92 79.3
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 1.6e-30 136.0 90 80.0
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 1.6e-30 136.0 90 80.0
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 1.6e-30 136.0 90 81.1
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 2.1e-30 135.6 92 79.3
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 2.1e-30 135.6 91 80.2
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 2.8e-30 135.2 92 78.3
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 2.8e-30 135.2 92 78.3
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 2.8e-30 135.2 92 78.3
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 4.7e-30 134.4 90 78.9
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 4.7e-30 134.4 90 78.9
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 4.7e-30 134.4 90 78.9
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 4.7e-30 134.4 90 78.9
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 4.7e-30 134.4 90 78.9
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 4.7e-30 134.4 90 78.9
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 6.1e-30 134.0 90 78.9
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 6.1e-30 134.0 92 77.2
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 6.1e-30 134.0 92 76.1
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 6.1e-30 134.0 92 77.2
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 6.1e-30 134.0 77 88.3
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 8.0e-30 133.7 90 78.9
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 8.0e-30 133.7 90 78.9
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 8.0e-30 133.7 92 77.2
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 8.0e-30 133.7 90 77.8
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 1.8e-29 132.5 96 75.0
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 1.8e-29 132.5 90 77.8
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 1.8e-29 132.5 90 77.8
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 1.8e-29 132.5 92 76.1
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 2.3e-29 132.1 92 76.1
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 3.0e-29 131.7 92 76.1
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 3.0e-29 131.7 92 76.1
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 3.0e-29 131.7 92 76.1
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 3.0e-29 131.7 90 77.8
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 3.0e-29 131.7 92 76.1
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 3.0e-29 131.7 92 76.1
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 4.0e-29 131.3 91 76.9
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 4.0e-29 131.3 91 76.9
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 4.0e-29 131.3 92 77.2
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 4.0e-29 131.3 92 76.1
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 4.0e-29 131.3 92 76.1
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 4.0e-29 131.3 92 76.1
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 4.0e-29 131.3 92 76.1
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 4.0e-29 131.3 92 76.1
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 4.0e-29 131.3 92 76.1
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 4.0e-29 131.3 92 76.1
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 5.2e-29 131.0 92 76.1
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 5.2e-29 131.0 91 78.0
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 6.8e-29 130.6 92 76.1
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 6.8e-29 130.6 92 75.0
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 8.9e-29 130.2 90 75.6
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 1.2e-28 129.8 92 75.0
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 1.2e-28 129.8 92 75.0
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 1.2e-28 129.8 78 84.6
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 1.2e-28 129.8 78 84.6
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 1.2e-28 129.8 90 75.6
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 1.5e-28 129.4 92 75.0
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 1.5e-28 129.4 91 74.7
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 2.6e-28 128.6 92 72.8
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 3.4e-28 128.3 92 73.9
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 4.4e-28 127.9 92 73.9
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 1.3e-27 126.3 92 73.9
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 1.7e-27 125.9 92 72.8
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 6.4e-27 124.0 79 79.7
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 2.7e-25 118.6 90 70.0
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 5.9e-25 117.5 92 70.7
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 5.9e-25 117.5 92 70.7
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 5.9e-25 117.5 75 77.3
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 1.0e-24 116.7 79 77.2
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 2.3e-24 115.5 79 77.2
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 5.0e-24 114.4 80 76.2
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 6.6e-24 114.0 81 76.5
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 5.6e-23 110.9 90 66.7
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 5.6e-23 110.9 90 66.7
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 5.6e-23 110.9 90 66.7
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 9.5e-23 110.2 91 65.9
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 9.5e-23 110.2 90 70.0
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 9.5e-23 110.2 90 66.7
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 1.6e-22 109.4 90 66.7
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 2.1e-22 109.0 80 73.8
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 6.2e-22 107.5 90 64.4
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 6.8e-21 104.0 99 60.6
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 6.8e-21 104.0 92 64.1
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 2.0e-17 92.4 72 63.9
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 2.0e-17 92.4 70 65.7
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 1.3e-16 89.7 76 56.6
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 4.7e-14 81.3 69 55.1
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 1.1e-13 80.1 90 54.4
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 3.1e-13 78.6 51 78.4
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 1.2e-12 76.6 38 92.1
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.6e-12 75.5 48 79.2
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.1e-10 70.1 38 84.2
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 2.4e-10 68.9 51 66.7
SEGI_40703 Sequoiadendron giganteum HOM05D007087 ORTHO05D008968 1.9e-07 59.3 64 40.6


User provided reference genes

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