Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G006850 Populus trichocarpa HOM05D008250 ORTHO05D010361 4.5e-21 103.6 50 100.0
Potri.007G006700 Populus trichocarpa HOM05D008250 ORTHO05D010361 4.8e-15 83.6 47 85.1
ClCG02G012200 Citrullus lanatus HOM05D008250 ORTHO05D010361 9.1e-14 79.3 47 80.9
Gohir.A12G078200 Gossypium hirsutum HOM05D008250 ORTHO05D010361 1.2e-13 79.0 47 78.7
GSVIVG01002948001 Vitis vinifera HOM05D008250 ORTHO05D010361 1.2e-13 79.0 47 83.0
GSVIVG01004436001 Vitis vinifera HOM05D008250 ORTHO05D010361 1.2e-13 79.0 47 83.0
Gohir.D12G076400 Gossypium hirsutum HOM05D008250 ORTHO05D010361 1.5e-13 78.6 47 76.6
Gorai.008G085000 Gossypium raimondii HOM05D008250 ORTHO05D010361 1.5e-13 78.6 47 76.6
Manes.12G117000 Manihot esculenta HOM05D008250 ORTHO05D010361 1.5e-13 78.6 47 76.6
Thecc.01G075500 Theobroma cacao HOM05D008250 ORTHO05D010361 1.5e-13 78.6 47 78.7
COL.COLO4_11607 Corchorus olitorius HOM05D008250 ORTHO05D010361 2.0e-13 78.2 47 76.6
Atru.chr3.1053 Acer truncatum HOM05D008250 ORTHO05D010361 3.4e-13 77.4 47 80.9
Ciclev10026916m.g Citrus clementina HOM05D008250 ORTHO05D010361 3.4e-13 77.4 47 76.6
Thhalv10005252m.g Eutrema salsugineum HOM05D008250 ORTHO05D010361 4.5e-13 77.0 47 80.9
HanXRQChr09g0255361 Helianthus annuus HOM05D008250 ORTHO05D010361 5.9e-13 76.6 48 75.0
Hma1.2p1_1760F.1_g301220 Hydrangea macrophylla HOM05D008250 ORTHO05D010361 1.0e-12 75.9 47 78.7
CiPaw.01G002500 Carya illinoinensis HOM05D008250 ORTHO05D010361 1.7e-12 75.1 45 80.0
Actinidia16414 Actinidia chinensis HOM05D008250 ORTHO05D010361 2.9e-12 74.3 47 74.5
Nn6g34516 Nelumbo nucifera HOM05D008250 ORTHO05D010361 2.9e-12 74.3 47 76.6
Aqoxy6G02462 Aquilegia oxysepala HOM05D008250 ORTHO05D010361 3.8e-12 73.9 45 80.0
MD02G1189100 Malus domestica HOM05D008250 ORTHO05D010361 5.0e-12 73.6 45 77.8
Lsat_1_v5_gn_4_159680 Lactuca sativa HOM05D008250 ORTHO05D010361 1.1e-11 72.4 47 72.3
Sed0009961 Sechium edule HOM05D008250 ORTHO05D010361 1.4e-11 72.0 47 72.3
Sc03g0002500 Simmondsia chinensis HOM05D008250 ORTHO05D010361 1.9e-11 71.6 47 70.2
TWI74G1530 Tripterygium wilfordii HOM05D008250 ORTHO05D010361 1.9e-11 71.6 47 72.3
BcaB02g09904 Brassica carinata HOM05D008250 ORTHO05D010361 2.5e-11 71.2 47 72.3
BcaC01g02825 Brassica carinata HOM05D008250 ORTHO05D010361 2.5e-11 71.2 47 72.3
BraA06t26203Z Brassica rapa HOM05D008250 ORTHO05D010361 2.5e-11 71.2 47 72.3
CARHR279880 Cardamine hirsuta HOM05D008250 ORTHO05D010361 2.5e-11 71.2 49 73.5
Migut.H00327 Erythranthe guttata HOM05D008250 ORTHO05D010361 2.5e-11 71.2 45 77.8
Phvul.003G233500 Phaseolus vulgaris HOM05D008250 ORTHO05D010361 2.5e-11 71.2 45 75.6
Solyc02g092130.2 Solanum lycopersicum HOM05D008250 ORTHO05D010361 3.2e-11 70.9 45 75.6
RcHm_v2.0_Chr2g0108561 Rosa chinensis HOM05D008250 ORTHO05D010361 7.2e-11 69.7 47 70.2
PGSC0003DMG400021408 Solanum tuberosum HOM05D008250 ORTHO05D010361 9.4e-11 69.3 45 73.3
Prupe.6G217600 Prunus persica HOM05D008250 ORTHO05D010361 1.2e-10 68.9 38 86.8
C03p59760 Brassica napus HOM05D008250 ORTHO05D010361 1.6e-10 68.6 47 70.2
C03p59770 Brassica napus HOM05D008250 ORTHO05D010361 1.6e-10 68.6 47 70.2
BolC3t18239H Brassica oleracea HOM05D008250 ORTHO05D010361 1.6e-10 68.6 47 70.2
BolC3t18240H Brassica oleracea HOM05D008250 ORTHO05D010361 1.6e-10 68.6 47 70.2
AT5G65880 Arabidopsis thaliana HOM05D008250 ORTHO05D010361 2.1e-10 68.2 43 76.7
arahy.Tifrunner.gnm1.ann1.IKZ63P Arachis hypogaea HOM05D008250 ORTHO05D010361 2.7e-10 67.8 35 88.6
arahy.Tifrunner.gnm1.ann1.L5XXFX Arachis hypogaea HOM05D008250 ORTHO05D010361 2.7e-10 67.8 35 88.6
AL8G43594 Arabidopsis lyrata HOM05D008250 ORTHO05D010361 3.6e-10 67.4 43 76.7
Carub.0008s2677 Capsella rubella HOM05D008250 ORTHO05D010361 4.7e-10 67.0 43 74.4
Glyma.05G107700 Glycine max HOM05D008250 ORTHO05D010361 6.1e-10 66.6 38 81.6
Lalb_Chr05g0230301 Lupinus albus HOM05D008250 ORTHO05D010361 6.1e-10 66.6 39 82.1
Lj4g0012638 Lotus japonicus HOM05D008250 ORTHO05D010361 1.0e-09 65.9 37 83.8
Glyma.17G159100 Glycine max HOM05D008250 ORTHO05D010361 2.3e-09 64.7 37 81.1
SEGI_25339 Sequoiadendron giganteum HOM05D008250 ORTHO05D010361 2.3e-09 64.7 46 63.0
TPR.G3717 Trifolium pratense HOM05D008250 ORTHO05D010361 5.1e-09 63.5 37 78.4
Medtr4g097410 Medicago truncatula HOM05D008250 ORTHO05D010361 6.7e-09 63.2 36 80.6
CDE02G1785 Ceratophyllum demersum HOM05D008250 ORTHO05D010361 8.8e-09 62.8 49 63.3
Psat4g080920 Pisum sativum HOM05D008250 ORTHO05D010361 2.0e-08 61.6 36 77.8
CsaV3_2G016360 Cucumis sativus L. HOM05D008250 ORTHO05D010361 5.7e-08 60.1 36 75.0


User provided reference genes

Program Settings