Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G162500 Populus trichocarpa HOM05D008601 ORTHO05D010814 4.9e-12 73.2 38 100.0
AL2G21540 Arabidopsis lyrata HOM05D008601 ORTHO05D010814 3.5e-10 67.0 38 89.5
ATCG00510 Arabidopsis thaliana HOM05D008601 ORTHO05D010814 3.5e-10 67.0 38 89.5
C09p29590 Brassica napus HOM05D008601 ORTHO05D010814 6.0e-10 66.2 38 86.8
BolSC29t60466H Brassica oleracea HOM05D008601 ORTHO05D010814 6.0e-10 66.2 38 86.8
BolSC29t60588H Brassica oleracea HOM05D008601 ORTHO05D010814 6.0e-10 66.2 38 86.8
BolSC35t60751H Brassica oleracea HOM05D008601 ORTHO05D010814 6.0e-10 66.2 38 86.8
BolSC47t61098H Brassica oleracea HOM05D008601 ORTHO05D010814 6.0e-10 66.2 38 86.8
BraSC25t45847Z Brassica rapa HOM05D008601 ORTHO05D010814 6.0e-10 66.2 38 86.8
BraSC25t45867Z Brassica rapa HOM05D008601 ORTHO05D010814 6.0e-10 66.2 38 86.8
BraSC58t46421Z Brassica rapa HOM05D008601 ORTHO05D010814 6.0e-10 66.2 38 86.8
BraSC59t46592Z Brassica rapa HOM05D008601 ORTHO05D010814 6.0e-10 66.2 38 86.8
BolSC35t60645H Brassica oleracea HOM05D008601 ORTHO05D010814 7.9e-10 65.9 37 86.5
Potri.016G094033 Populus trichocarpa HOM05D008601 ORTHO05D010814 3.0e-09 63.9 37 89.2
BolC9t55820H Brassica oleracea HOM05D008601 ORTHO05D010814 5.1e-09 63.2 37 83.8
BolC9t58297H Brassica oleracea HOM05D008601 ORTHO05D010814 6.7e-09 62.8 38 84.2
C09p54220 Brassica napus HOM05D008601 ORTHO05D010814 1.9e-08 61.2 38 81.6
C09p54260 Brassica napus HOM05D008601 ORTHO05D010814 1.9e-08 61.2 38 81.6
BolSC49t61184H Brassica oleracea HOM05D008601 ORTHO05D010814 2.5e-08 60.8 37 81.1
PGR111G0070 Punica granatum HOM05D008601 ORTHO05D010814 3.3e-08 60.5 33 90.9
GSVIVG01030618001 Vitis vinifera HOM05D008601 ORTHO05D010814 4.3e-08 60.1 33 93.9
BolSC46t60999H Brassica oleracea HOM05D008601 ORTHO05D010814 5.7e-08 59.7 37 78.4
BolSC46t61036H Brassica oleracea HOM05D008601 ORTHO05D010814 5.7e-08 59.7 37 78.4
Gohir.1Z050366 Gossypium hirsutum HOM05D008601 ORTHO05D010814 5.7e-08 59.7 38 81.6
Gohir.A07G163663 Gossypium hirsutum HOM05D008601 ORTHO05D010814 5.7e-08 59.7 38 81.6
Lalb_Chr22g0360781 Lupinus albus HOM05D008601 ORTHO05D010814 5.7e-08 59.7 32 93.8
Glyma.15G003800 Glycine max HOM05D008601 ORTHO05D010814 9.6e-08 58.9 33 87.9
PSO548G0030 Papaver somniferum HOM05D008601 ORTHO05D010814 2.1e-07 57.8 31 93.5
A06p23210 Brassica napus HOM05D008601 ORTHO05D010814 2.8e-07 57.4 33 84.8
CAN.G1569.13 Capsicum annuum HOM05D008601 ORTHO05D010814 4.8e-07 56.6 31 87.1
Gohir.D06G120350 Gossypium hirsutum HOM05D008601 ORTHO05D010814 4.8e-07 56.6 33 87.9
Solyc07g024040.2 Solanum lycopersicum HOM05D008601 ORTHO05D010814 4.8e-07 56.6 31 93.5
C09p54280 Brassica napus HOM05D008601 ORTHO05D010814 6.2e-07 56.2 37 75.7
Glyma.10G208900 Glycine max HOM05D008601 ORTHO05D010814 6.2e-07 56.2 33 84.8
BolSC45t60952H Brassica oleracea HOM05D008601 ORTHO05D010814 8.2e-07 55.8 33 81.8
Nn3g19077 Nelumbo nucifera HOM05D008601 ORTHO05D010814 1.1e-06 55.5 31 87.1
Gohir.D06G105100 Gossypium hirsutum HOM05D008601 ORTHO05D010814 1.4e-06 55.1 38 78.9
Nitab4.5_0001170g0140 Nicotiana tabacum HOM05D008601 ORTHO05D010814 1.4e-06 55.1 31 90.3
CAN.G212.8 Capsicum annuum HOM05D008601 ORTHO05D010814 1.8e-06 54.7 31 87.1
BraA10t43927Z Brassica rapa HOM05D008601 ORTHO05D010814 2.4e-06 54.3 34 82.4
Gorai.004G118500 Gossypium raimondii HOM05D008601 ORTHO05D010814 3.1e-06 53.9 38 76.3
Gorai.012G112500 Gossypium raimondii HOM05D008601 ORTHO05D010814 4.0e-06 53.5 38 73.7
Glyma.17G173700 Glycine max HOM05D008601 ORTHO05D010814 5.3e-06 53.1 33 84.8
Gorai.004G112900 Gossypium raimondii HOM05D008601 ORTHO05D010814 6.9e-06 52.8 37 73.0


User provided reference genes

Program Settings