Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 3.0e-136 488.4 232 100.0
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 1.0e-123 446.8 235 91.5
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 1.4e-93 346.7 191 84.3
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 5.4e-93 344.7 227 71.8
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 7.0e-93 344.4 227 71.8
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 7.0e-93 344.4 227 73.1
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.2e-92 343.6 227 71.8
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.0e-92 342.8 227 71.8
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 2.7e-92 342.4 224 74.1
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 3.5e-92 342.0 205 82.9
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 1.7e-91 339.7 236 72.0
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 2.3e-91 339.3 223 74.0
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 3.8e-91 338.6 239 72.8
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 5.0e-91 338.2 217 75.1
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 6.6e-91 337.8 224 72.8
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 1.5e-90 336.7 234 70.5
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 2.5e-90 335.9 231 71.4
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 7.3e-90 334.3 228 70.6
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 1.2e-89 333.6 217 74.7
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 2.8e-89 332.4 179 86.0
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 3.6e-89 332.0 179 86.0
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 3.6e-89 332.0 229 71.6
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 3.6e-89 332.0 172 88.4
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 3.6e-89 332.0 180 87.8
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 1.4e-88 330.1 228 71.5
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 1.4e-88 330.1 221 73.3
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 8.9e-88 327.4 166 91.0
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 1.5e-87 326.6 232 70.3
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 2.0e-87 326.2 222 71.2
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 7.5e-87 324.3 166 90.4
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 9.8e-87 323.9 218 72.0
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 2.2e-86 322.8 229 69.4
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 1.1e-85 320.5 172 87.2
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 7.0e-85 317.8 178 82.0
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 9.2e-85 317.4 229 69.4
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 9.2e-85 317.4 168 86.3
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 1.2e-84 317.0 167 85.6
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 1.2e-84 317.0 174 82.2
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 1.2e-84 317.0 170 87.1
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 1.2e-84 317.0 182 81.9
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 1.2e-84 317.0 182 81.9
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 1.6e-84 316.6 171 84.8
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 2.0e-84 316.2 167 86.8
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 4.6e-84 315.1 182 83.0
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 4.6e-84 315.1 180 81.7
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 4.6e-84 315.1 170 85.9
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 7.8e-84 314.3 173 82.1
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 5.0e-83 311.6 166 86.7
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 5.0e-83 311.6 167 84.4
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 6.6e-83 311.2 239 65.7
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 8.6e-83 310.8 227 67.4
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 8.6e-83 310.8 166 86.7
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 1.1e-82 310.5 228 68.0
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 1.9e-82 309.7 172 82.0
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 2.5e-82 309.3 167 83.2
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 4.3e-82 308.5 166 84.9
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 4.3e-82 308.5 232 65.5
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 5.6e-82 308.1 192 74.5
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 1.2e-81 307.0 165 85.5
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 1.2e-81 307.0 165 85.5
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 2.1e-81 306.2 177 80.8
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 4.7e-81 305.1 166 83.1
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 4.7e-81 305.1 170 82.4
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 6.2e-81 304.7 177 78.5
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 6.2e-81 304.7 177 79.7
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 8.0e-81 304.3 165 84.8
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 1.1e-80 303.9 163 85.9
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 1.4e-80 303.5 166 82.5
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 2.3e-80 302.8 186 75.3
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 2.3e-80 302.8 180 78.9
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 2.3e-80 302.8 179 79.3
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 4.0e-80 302.0 182 76.4
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 4.0e-80 302.0 169 81.7
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 8.9e-80 300.8 170 84.1
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 8.9e-80 300.8 180 76.7
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 1.5e-79 300.1 206 70.9
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 1.5e-79 300.1 172 80.2
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 2.6e-79 299.3 177 80.2
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 7.5e-79 297.7 206 69.9
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 7.5e-79 297.7 206 69.9
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 7.5e-79 297.7 206 69.9
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 9.8e-79 297.4 159 86.8
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 1.3e-78 297.0 175 79.4
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 1.3e-78 297.0 175 79.4
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 1.3e-78 297.0 150 89.3
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 7.0e-77 291.2 158 81.6
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 9.2e-77 290.8 212 66.0
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 1.2e-76 290.4 218 65.6
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 1.2e-76 290.4 155 83.9
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 4.7e-73 278.5 151 85.4
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 8.1e-73 277.7 159 82.4
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 5.2e-72 275.0 149 85.2
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 7.8e-68 261.2 169 73.4
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 3.3e-66 255.8 181 64.6
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 4.0e-64 248.8 227 56.4
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 3.4e-63 245.7 169 68.6
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 4.4e-63 245.4 158 70.9
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 1.5e-58 230.3 122 86.1
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 1.6e-57 226.9 155 64.5
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 2.8e-57 226.1 187 62.6
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 1.8e-56 223.4 141 73.8
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 9.3e-53 211.1 113 86.7
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 9.3e-45 184.5 170 58.2
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 1.2e-44 184.1 123 65.9
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 9.6e-42 174.5 130 61.5
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 6.7e-35 151.8 227 42.7
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 3.1e-32 142.9 158 46.2
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 9.0e-32 141.4 97 69.1
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 3.4e-15 86.3 42 90.5
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 6.5e-14 82.0 46 76.1
A10p15960 Brassica napus HOM05D007102 ORTHO05D008950 7.7e-07 58.5 54 53.7


User provided reference genes

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