Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G158300 Populus trichocarpa HOM05D008739 ORTHO05D010871 1.1e-98 363.2 178 100.0
Manes.02G211000 Manihot esculenta HOM05D008739 ORTHO05D010871 4.2e-37 158.7 163 49.7
Manes.10G109500 Manihot esculenta HOM05D008739 ORTHO05D010871 5.5e-37 158.3 163 48.5
Hma1.2p1_0161F.1_g072120 Hydrangea macrophylla HOM05D008739 ORTHO05D010871 3.2e-29 132.5 159 45.3
MD11G1052300 Malus domestica HOM05D008739 ORTHO05D010871 1.2e-28 130.6 161 47.2
Ciclev10003504m.g Citrus clementina HOM05D008739 ORTHO05D010871 2.3e-27 126.3 166 44.6
Prupe.6G039900 Prunus persica HOM05D008739 ORTHO05D010871 1.1e-26 124.0 174 43.7
FvH4_3g40790 Fragaria vesca HOM05D008739 ORTHO05D010871 1.5e-26 123.6 158 48.1
FAN21G0244 Fragaria x ananassa HOM05D008739 ORTHO05D010871 1.5e-26 123.6 158 48.1
FAN16G3503 Fragaria x ananassa HOM05D008739 ORTHO05D010871 3.3e-26 122.5 138 50.7
FAN21G0180 Fragaria x ananassa HOM05D008739 ORTHO05D010871 4.3e-26 122.1 157 47.8
FAN11G3221 Fragaria x ananassa HOM05D008739 ORTHO05D010871 9.7e-26 120.9 138 50.0
RcHm_v2.0_Chr5g0073511 Rosa chinensis HOM05D008739 ORTHO05D010871 2.8e-25 119.4 163 46.6
TPR.G28594 Trifolium pratense HOM05D008739 ORTHO05D010871 3.1e-24 115.9 156 42.9
VMungo0647G0030 Vigna mungo HOM05D008739 ORTHO05D010871 3.1e-24 115.9 161 42.9
Cpa.g.sc2.284 Carica papaya HOM05D008739 ORTHO05D010871 4.1e-24 115.5 161 41.0
Thecc.10G185700 Theobroma cacao HOM05D008739 ORTHO05D010871 1.2e-23 114.0 125 48.0
Sopen06g002410 Solanum pennellii HOM05D008739 ORTHO05D010871 7.7e-23 111.3 105 50.5
CiPaw.13G062800 Carya illinoinensis HOM05D008739 ORTHO05D010871 2.2e-22 109.8 117 54.7
CiPaw.01G083500 Carya illinoinensis HOM05D008739 ORTHO05D010871 3.8e-22 109.0 109 52.3
ATR1127G131 Amborella trichopoda HOM05D008739 ORTHO05D010871 4.2e-21 105.5 152 40.1
Peaxi162Scf00131g00137 Petunia axillaris HOM05D008739 ORTHO05D010871 4.2e-21 105.5 128 46.1
Phvul.008G246200 Phaseolus vulgaris HOM05D008739 ORTHO05D010871 4.2e-21 105.5 159 40.9
arahy.Tifrunner.gnm1.ann1.E8Q4P5 Arachis hypogaea HOM05D008739 ORTHO05D010871 2.7e-20 102.8 168 38.7
COL.COLO4_19482 Corchorus olitorius HOM05D008739 ORTHO05D010871 4.7e-20 102.1 131 45.0
Migut.N00722 Erythranthe guttata HOM05D008739 ORTHO05D010871 6.1e-20 101.7 118 43.2
Medtr5g075520 Medicago truncatula HOM05D008739 ORTHO05D010871 1.4e-19 100.5 174 39.1
Thecc.09G364600 Theobroma cacao HOM05D008739 ORTHO05D010871 3.9e-19 99.0 160 37.5
LjContig00141g0007680 Lotus japonicus HOM05D008739 ORTHO05D010871 3.3e-18 95.9 123 47.2
DCAR_009469 Daucus carota HOM05D008739 ORTHO05D010871 4.4e-18 95.5 164 36.6
arahy.Tifrunner.gnm1.ann1.KWYB1L Arachis hypogaea HOM05D008739 ORTHO05D010871 5.7e-18 95.1 137 40.1
Actinidia31640 Actinidia chinensis HOM05D008739 ORTHO05D010871 7.4e-18 94.7 133 40.6
HanXRQChr08g0230271 Helianthus annuus HOM05D008739 ORTHO05D010871 9.7e-18 94.4 139 40.3
Actinidia23835 Actinidia chinensis HOM05D000032 ORTHO05D009914 2.4e-16 89.7 115 39.1
Lsat_1_v5_gn_9_13661 Lactuca sativa HOM05D008739 ORTHO05D010871 6.9e-16 88.2 138 37.0
SalBow2G3501 Salvia bowleyana HOM05D008739 ORTHO05D010871 2.0e-15 86.7 95 44.2
PGR044G0285 Punica granatum HOM05D008739 ORTHO05D010871 7.7e-15 84.7 101 43.6
QL01p024407 Quercus lobata HOM05D008739 ORTHO05D010871 4.2e-13 79.0 98 46.9
Duzib114G0462 Durio zibethinus HOM05D008739 ORTHO05D010871 9.4e-13 77.8 91 40.7
Haze_24478 Corylus avellana HOM05D000224 ORTHO05D002442 4.7e-12 75.5 132 40.2
COL.COLO4_11221 Corchorus olitorius HOM05D000224 ORTHO05D002442 1.4e-08 63.9 76 43.4
Glyma.14G205400 Glycine max HOM05D008739 ORTHO05D010871 4.1e-08 62.4 107 36.4
FAN25G3824 Fragaria x ananassa HOM05D008739 ORTHO05D010871 7.0e-08 61.6 137 35.8
MBI15_g46028_MAGBIO Magnolia biondii HOM05D008739 ORTHO05D010871 7.7e-07 58.2 71 40.8
MBI15_g32296_MAGBIO Magnolia biondii HOM05D008739 ORTHO05D010871 1.7e-06 57.0 89 37.1
unitig_748.g8711 Utricularia gibba HOM05D002444 ORTHO05D004748 1.7e-06 57.0 81 38.3


User provided reference genes

Program Settings