Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 3.7e-100 368.2 187 100.0
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 2.3e-78 295.8 185 83.2
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 8.8e-78 293.9 187 81.3
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 1.3e-60 236.9 183 67.2
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 2.2e-57 226.1 188 63.8
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 4.2e-56 221.9 112 92.9
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 7.2e-56 221.1 183 61.7
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 9.4e-56 220.7 188 64.4
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 8.8e-54 214.2 189 63.0
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 2.0e-53 213.0 190 64.2
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 3.4e-53 212.2 187 62.6
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 4.4e-53 211.8 191 59.7
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 5.7e-53 211.5 181 62.4
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 8.3e-52 207.6 181 59.7
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 3.1e-51 205.7 175 62.3
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.9e-49 199.1 188 56.9
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 6.5e-49 198.0 181 60.2
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 1.5e-48 196.8 173 60.1
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 5.5e-48 194.9 184 59.8
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 5.5e-48 194.9 175 59.4
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 9.4e-48 194.1 194 58.8
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 9.4e-48 194.1 176 56.8
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.2e-47 193.7 188 56.9
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 1.6e-47 193.4 184 59.8
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 2.7e-47 192.6 188 56.9
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 8.0e-47 191.0 179 57.0
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 1.4e-46 190.3 205 55.6
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 1.4e-46 190.3 183 56.8
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 3.0e-46 189.1 195 56.4
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 8.8e-46 187.6 179 57.0
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 1.3e-44 183.7 178 56.7
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 1.7e-44 183.3 171 57.9
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.7e-44 183.3 158 61.4
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 1.7e-44 183.3 184 56.5
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.2e-44 183.0 158 61.4
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 3.7e-44 182.2 184 56.0
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 6.3e-44 181.4 190 54.2
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.1e-43 180.6 178 58.4
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 1.4e-43 180.3 184 57.1
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 7.0e-43 177.9 116 72.4
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 1.6e-42 176.8 174 54.0
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 2.0e-42 176.4 188 55.9
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 3.5e-42 175.6 184 53.8
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 4.5e-42 175.3 189 51.9
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 7.7e-42 174.5 179 53.6
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 1.7e-41 173.3 184 53.3
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 2.3e-41 172.9 184 52.2
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.9e-41 172.6 153 58.8
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 2.9e-41 172.6 182 56.0
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 5.0e-41 171.8 115 73.0
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 5.6e-40 168.3 104 76.0
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.1e-39 166.4 189 51.9
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 6.1e-39 164.9 188 50.0
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 1.0e-38 164.1 104 73.1
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 1.4e-38 163.7 170 51.8
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 1.8e-38 163.3 175 52.0
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 2.3e-38 162.9 171 53.2
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 6.8e-38 161.4 171 52.6
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 2.6e-37 159.5 184 50.0
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 3.4e-37 159.1 177 52.0
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 3.4e-37 159.1 173 54.3
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 5.7e-37 158.3 110 70.0
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 9.8e-37 157.5 190 47.9
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 8.3e-36 154.5 200 46.0
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 1.2e-34 150.6 123 62.6
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 1.2e-34 150.6 111 64.0
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 2.0e-34 149.8 171 50.9
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 2.0e-34 149.8 119 63.9
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 1.3e-33 147.1 172 50.0
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.7e-33 146.7 123 63.4
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 1.7e-33 146.7 117 64.1
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 3.0e-33 146.0 246 39.4
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 5.0e-33 145.2 108 64.8
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 1.1e-32 144.1 104 66.3
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 1.5e-32 143.7 115 62.6
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 2.5e-32 142.9 206 43.7
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 4.3e-32 142.1 97 70.1
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 9.5e-32 141.0 117 59.8
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.2e-31 140.6 194 46.9
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 1.6e-31 140.2 196 45.9
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 2.8e-31 139.4 194 44.8
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 4.7e-31 138.7 119 59.7
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 4.7e-31 138.7 119 59.7
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 6.2e-31 138.3 111 63.1
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 8.9e-30 134.4 90 70.0
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 8.9e-30 134.4 104 61.5
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 8.9e-30 134.4 104 65.4
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 1.2e-29 134.0 121 58.7
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 3.4e-29 132.5 200 44.0
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 4.4e-29 132.1 197 47.2
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 5.8e-29 131.7 169 49.1
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 1.3e-28 130.6 206 42.7
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.3e-28 130.6 203 43.3
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 2.2e-28 129.8 197 44.2
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 4.9e-28 128.6 186 42.5
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 4.9e-28 128.6 202 44.6
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 8.3e-28 127.9 202 42.1
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 8.3e-28 127.9 204 44.1
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 1.1e-27 127.5 197 46.2
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 1.9e-27 126.7 204 43.6
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 3.2e-27 125.9 197 45.7
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 4.1e-27 125.6 161 47.8
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 4.1e-27 125.6 203 44.8
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 4.1e-27 125.6 202 43.1
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 7.0e-27 124.8 199 43.2
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 9.2e-27 124.4 203 42.9
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 1.2e-26 124.0 203 41.9
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 1.3e-25 120.6 199 44.2
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 8.6e-25 117.9 128 50.0
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 1.4e-22 110.5 202 38.6
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 1.4e-22 110.5 86 60.5
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 8.9e-22 107.8 116 48.3
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 2.0e-21 106.7 84 63.1
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 5.8e-21 105.1 213 34.3
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 1.7e-20 103.6 179 38.5
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 4.9e-20 102.1 63 73.0
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 6.4e-20 101.7 182 36.3
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 3.2e-19 99.4 186 34.4
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 7.1e-19 98.2 182 35.2
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 2.1e-18 96.7 185 33.0
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 2.7e-18 96.3 68 64.7
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 3.5e-18 95.9 185 34.6
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 1.3e-17 94.0 57 73.7
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 1.7e-17 93.6 134 41.0
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 3.3e-16 89.4 67 56.7
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 8.1e-15 84.7 117 40.2
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 1.4e-14 84.0 67 55.2
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 1.4e-14 84.0 67 55.2
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 1.4e-14 84.0 67 55.2
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 1.4e-14 84.0 67 55.2
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 7.6e-13 78.2 176 30.7
CARHR123780 Cardamine hirsuta HOM05D005957 ORTHO05D007318 8.6e-09 64.7 166 37.3
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 9.6e-08 61.2 60 43.3


User provided reference genes

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