Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G148300 Populus trichocarpa HOM05D007836 ORTHO05D009876 1.3e-39 166.0 85 100.0
Sabra19G0118200 Salix brachista HOM05D007836 ORTHO05D009876 3.7e-23 111.3 92 71.7
Potri.019G117800 Populus trichocarpa HOM05D007836 ORTHO05D009876 1.8e-22 109.0 92 70.7
Manes.13G152300 Manihot esculenta HOM05D007836 ORTHO05D009876 1.0e-20 103.2 87 66.7
COL.COLO4_13657 Corchorus olitorius HOM05D007836 ORTHO05D009876 1.6e-15 85.9 85 57.6
Thecc.02G170500 Theobroma cacao HOM05D007836 ORTHO05D009876 1.8e-14 82.4 83 56.6
QL08p037020 Quercus lobata HOM05D007836 ORTHO05D009876 3.4e-13 78.2 92 50.0
CiPaw.03G168400 Carya illinoinensis HOM05D007836 ORTHO05D009876 1.0e-12 76.6 95 46.3
Gohir.D13G064750 Gossypium hirsutum HOM05D007836 ORTHO05D009876 1.0e-12 76.6 70 60.0
Gorai.013G073500 Gossypium raimondii HOM05D007836 ORTHO05D009876 1.0e-12 76.6 70 60.0
Gohir.A13G057150 Gossypium hirsutum HOM05D007836 ORTHO05D009876 2.9e-12 75.1 70 58.6
Cfa014529 Carpinus fangiana HOM05D007836 ORTHO05D009876 3.8e-12 74.7 89 49.4
Sabra19G0135400 Salix brachista HOM05D007836 ORTHO05D009876 5.0e-12 74.3 66 69.7
Ciclev10018116m.g Citrus clementina HOM05D007836 ORTHO05D009876 1.1e-11 73.2 87 49.4
Manes.12G082200 Manihot esculenta HOM05D007836 ORTHO05D009876 2.7e-10 68.6 70 58.6
Nn1g03860 Nelumbo nucifera HOM05D007836 ORTHO05D009876 3.6e-10 68.2 88 51.1
Nn1g03862 Nelumbo nucifera HOM05D007836 ORTHO05D009876 3.6e-10 68.2 88 51.1
Medtr2g011690 Medicago truncatula HOM05D007836 ORTHO05D009876 1.8e-09 65.9 90 45.6
MBI18_g27690_MAGBIO Magnolia biondii HOM05D007836 ORTHO05D009876 3.0e-09 65.1 83 48.2
Atru.chr6.3083 Acer truncatum HOM05D007836 ORTHO05D009876 1.9e-08 62.4 102 46.1
Psat1g208960 Pisum sativum HOM05D007836 ORTHO05D009876 1.9e-08 62.4 90 43.3
Ca_00250_v3 Cicer arietinum L. HOM05D007836 ORTHO05D009876 9.7e-08 60.1 88 45.5
Ca_29769_v3 Cicer arietinum L. HOM05D007836 ORTHO05D009876 9.7e-08 60.1 88 45.5
Ca_29839_v3 Cicer arietinum L. HOM05D007836 ORTHO05D009876 9.7e-08 60.1 88 45.5
TWI38G1692 Tripterygium wilfordii HOM05D007836 ORTHO05D009876 9.7e-08 60.1 76 52.6
Potri.004G033300 Populus trichocarpa HOM05D007836 ORTHO05D009876 1.3e-07 59.7 92 44.6
Thecc.06G201100 Theobroma cacao HOM05D007836 ORTHO05D009876 1.3e-07 59.7 95 44.2
CiPaw.10G117600 Carya illinoinensis HOM05D007836 ORTHO05D009876 1.7e-07 59.3 88 46.6
Ciclev10017323m.g Citrus clementina HOM05D007836 ORTHO05D009876 2.2e-07 58.9 89 47.2
Prupe.4G035300 Prunus persica HOM05D007836 ORTHO05D009876 2.2e-07 58.9 85 44.7
TPR.G36842 Trifolium pratense HOM05D007836 ORTHO05D009876 2.8e-07 58.5 90 45.6
Cfa000343 Carpinus fangiana HOM05D007836 ORTHO05D009876 6.3e-07 57.4 76 48.7
Sabra04G0019100 Salix brachista HOM05D007836 ORTHO05D009876 6.3e-07 57.4 92 43.5
COL.COLO4_31599 Corchorus olitorius HOM05D007836 ORTHO05D009876 8.2e-07 57.0 91 46.2
Haze_06588 Corylus avellana HOM05D007836 ORTHO05D009876 8.2e-07 57.0 73 47.9
Aqoxy1G03904 Aquilegia oxysepala HOM05D007836 ORTHO05D009876 1.1e-06 56.6 85 44.7
Hma1.2p1_1182F.1_g264760 Hydrangea macrophylla HOM05D007836 ORTHO05D009876 1.1e-06 56.6 75 42.7
Glyma.13G247000 Glycine max HOM05D007836 ORTHO05D009876 1.4e-06 56.2 91 44.0
Rhsim02G0119100 Rhododendron simsii HOM05D007836 ORTHO05D009876 1.4e-06 56.2 73 46.6
Migut.M01222 Erythranthe guttata HOM05D007836 ORTHO05D009876 2.4e-06 55.5 81 45.7
QL05p081073 Quercus lobata HOM05D007836 ORTHO05D009876 2.4e-06 55.5 77 42.9
MELO3C018771.2 Cucumis melo HOM05D024319 ORTHO05D025083 3.1e-06 55.1 57 54.4
Nitab4.5_0000649g0060 Nicotiana tabacum HOM05D007836 ORTHO05D009876 4.1e-06 54.7 75 48.0
Gohir.A10G021700 Gossypium hirsutum HOM05D007836 ORTHO05D009876 5.3e-06 54.3 95 43.2
Rhsim06G0153000 Rhododendron simsii HOM05D007836 ORTHO05D009876 5.3e-06 54.3 40 60.0
Sabra11G0028600 Salix brachista HOM05D007836 ORTHO05D009876 6.9e-06 53.9 76 43.4
CANSAT11G1852 Cannabis sativa HOM05D000831 ORTHO05D000660 9.1e-06 53.5 28 82.1
Gorai.011G023600 Gossypium raimondii HOM05D007836 ORTHO05D009876 9.1e-06 53.5 97 42.3


User provided reference genes

Program Settings