Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 1.3e-239 832.8 447 100.0
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 2.5e-211 738.8 447 90.4
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 3.4e-197 691.8 444 84.0
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 2.5e-195 685.6 447 83.0
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 1.0e-193 680.2 447 82.6
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 4.3e-147 525.4 447 68.7
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 4.6e-141 505.4 447 66.2
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 1.1e-126 457.6 469 59.7
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 4.6e-125 452.2 478 60.0
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 7.8e-125 451.4 469 59.3
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 5.1e-124 448.7 469 58.8
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 2.5e-123 446.4 472 60.6
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 3.4e-120 436.0 474 58.4
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 1.3e-119 434.1 470 59.8
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.3e-119 434.1 470 58.3
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 3.8e-119 432.6 474 58.2
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 6.4e-119 431.8 469 59.3
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.3e-116 424.1 468 56.6
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.3e-115 419.5 454 56.6
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 8.1e-114 414.8 461 58.6
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 5.8e-112 408.7 470 57.4
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 2.2e-111 406.8 462 56.5
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 1.9e-107 393.7 476 55.0
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 2.1e-106 390.2 467 54.6
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 4.0e-105 386.0 472 55.7
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 1.3e-103 380.9 478 54.4
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.8e-103 379.4 467 54.2
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 4.2e-102 375.9 472 54.0
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 7.1e-102 375.2 485 51.8
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 7.1e-102 375.2 467 53.3
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 2.5e-99 366.7 468 53.6
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.6e-98 364.0 468 53.4
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 8.2e-98 361.7 482 50.4
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 4.1e-97 359.4 498 52.0
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.2e-96 357.8 491 49.3
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 2.6e-96 356.7 494 50.6
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 3.4e-96 356.3 491 49.3
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 5.9e-96 355.5 479 53.4
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 5.9e-96 355.5 491 48.9
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 2.9e-95 353.2 471 51.8
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 6.5e-95 352.1 467 52.7
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 1.9e-94 350.5 469 50.5
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 5.5e-94 349.0 463 50.8
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 1.6e-93 347.4 503 49.5
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.0e-92 344.7 456 53.5
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 1.4e-92 344.4 489 51.7
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 1.8e-92 344.0 477 52.0
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.4e-89 334.3 494 49.8
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 3.1e-89 333.2 485 48.7
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 5.3e-89 332.4 482 49.2
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 2.6e-88 330.1 487 49.9
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 5.7e-83 312.4 435 50.6
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 3.1e-81 306.6 520 46.3
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 4.1e-81 306.2 468 46.4
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 4.5e-80 302.8 434 48.8
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 5.9e-80 302.4 491 47.9
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 2.2e-79 300.4 454 46.3
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 2.5e-78 297.0 481 46.8
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 4.2e-78 296.2 489 47.9
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 4.7e-77 292.7 311 59.2
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 4.7e-77 292.7 437 48.3
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 1.4e-76 291.2 471 46.3
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 1.5e-75 287.7 493 44.0
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.0e-75 287.3 424 46.9
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 4.4e-75 286.2 452 47.1
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 5.7e-75 285.8 493 44.0
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 2.8e-74 283.5 443 47.0
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 1.4e-73 281.2 475 44.6
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 1.8e-73 280.8 435 45.5
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 7.0e-73 278.9 343 55.4
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 1.0e-71 275.0 468 44.2
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 5.5e-70 269.2 421 46.6
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 4.7e-69 266.2 471 45.2
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 1.2e-67 261.5 454 45.4
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 5.7e-67 259.2 464 43.8
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 1.3e-66 258.1 465 42.2
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 2.0e-64 250.8 442 43.9
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 2.7e-64 250.4 441 45.4
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 2.1e-61 240.7 440 42.7
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 2.1e-61 240.7 484 41.3
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 1.2e-59 235.0 467 43.0
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 2.6e-59 233.8 482 40.7
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 4.8e-58 229.6 447 39.4
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 8.3e-58 228.8 516 39.1
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.1e-57 228.4 469 42.6
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 2.4e-57 227.3 440 41.1
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 3.1e-57 226.9 440 41.1
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 7.0e-57 225.7 467 41.5
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 1.7e-55 221.1 480 39.4
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 2.9e-55 220.3 442 41.2
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 1.1e-54 218.4 454 39.6
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 1.9e-54 217.6 470 39.8
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 1.1e-49 201.8 481 38.0
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 1.8e-49 201.1 382 42.1
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 6.1e-45 186.0 499 37.7
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 1.4e-44 184.9 447 37.8
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 4.4e-43 179.9 439 36.4
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 7.5e-43 179.1 371 37.7
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 9.8e-43 178.7 500 37.2
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 2.2e-42 177.6 441 36.5
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 2.4e-41 174.1 431 35.5
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 7.3e-38 162.5 480 35.2
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 5.2e-36 156.4 522 33.1
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 8.9e-36 155.6 97 78.4
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 4.4e-35 153.3 447 35.6
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 7.8e-32 142.5 469 34.3
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 6.0e-24 116.3 502 28.9
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 6.0e-24 116.3 161 50.3
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 1.7e-23 114.8 487 31.6
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 3.0e-23 114.0 438 33.8
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 3.9e-23 113.6 183 44.3
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 6.6e-23 112.8 178 45.5
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 1.6e-16 91.7 186 38.2
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.1e-14 85.5 433 28.4
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 4.4e-11 73.6 152 42.1
SGA_v2.0_scaffold51G18895 Striga asiatica HOM05D001803 ORTHO05D001686 1.7e-10 71.6 165 37.0
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 6.4e-10 69.7 456 26.3
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 3.2e-09 67.4 148 39.2
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 4.6e-08 63.5 148 40.5
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 6.6e-07 59.7 70 47.1


User provided reference genes

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