Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 8.1e-194 680.2 350 100.0
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 5.0e-175 617.8 350 90.6
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 1.5e-134 483.4 354 72.9
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 1.4e-116 423.7 348 67.8
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.5e-115 420.2 292 72.9
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 2.9e-114 416.0 359 65.2
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 4.1e-113 412.1 354 65.0
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 7.8e-112 407.9 302 70.5
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 1.3e-111 407.1 363 62.3
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 5.0e-111 405.2 358 64.2
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 8.6e-111 404.4 340 65.3
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 2.5e-110 402.9 360 63.6
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 9.5e-110 401.0 363 61.2
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 2.8e-109 399.4 359 62.7
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 8.1e-109 397.9 344 64.8
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 1.1e-108 397.5 303 69.6
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 6.8e-108 394.8 344 64.0
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 2.0e-107 393.3 367 60.8
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 5.8e-107 391.7 303 69.0
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 1.7e-106 390.2 352 61.9
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 6.4e-106 388.3 358 62.0
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.1e-105 387.5 360 59.4
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 5.4e-105 385.2 355 61.1
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 9.2e-105 384.4 360 58.1
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 3.5e-104 382.5 359 58.5
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 3.5e-104 382.5 258 70.9
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 7.8e-104 381.3 291 66.3
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 1.9e-102 376.7 278 68.0
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 4.3e-102 375.6 258 72.1
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 5.6e-102 375.2 289 66.4
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 7.3e-102 374.8 294 66.3
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 9.5e-102 374.4 308 65.9
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 3.6e-101 372.5 353 58.1
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 1.4e-100 370.5 287 64.8
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 2.4e-100 369.8 351 59.8
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 5.2e-100 368.6 291 65.3
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.2e-99 367.5 291 65.3
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 1.2e-99 367.5 352 58.0
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.6e-99 366.3 360 58.6
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.3e-98 364.0 361 58.4
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 3.8e-98 362.5 308 62.3
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 6.4e-98 361.7 325 60.0
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 8.4e-98 361.3 337 57.3
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.1e-97 360.9 357 58.3
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.4e-97 360.5 344 57.0
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 4.2e-97 359.0 364 56.3
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 4.2e-97 359.0 282 64.5
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 2.7e-96 356.3 324 58.6
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 3.5e-96 355.9 343 55.7
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 4.6e-96 355.5 280 63.9
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 7.8e-96 354.8 258 68.2
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 1.0e-95 354.4 293 63.1
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 1.3e-95 354.0 292 64.4
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.7e-95 353.6 346 57.2
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 3.0e-95 352.8 292 64.4
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 3.9e-95 352.4 289 63.3
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 5.1e-95 352.1 340 57.1
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 5.1e-95 352.1 355 54.6
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 6.6e-95 351.7 352 57.1
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 8.7e-95 351.3 345 57.1
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 1.1e-94 350.9 287 60.3
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 1.1e-94 350.9 306 61.4
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 3.3e-94 349.4 290 61.7
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 5.6e-94 348.6 350 55.1
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 5.6e-94 348.6 295 63.1
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 7.3e-94 348.2 277 63.5
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 7.3e-94 348.2 266 65.0
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 9.6e-94 347.8 355 54.9
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 1.2e-93 347.4 353 57.2
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 1.6e-93 347.1 260 65.4
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 2.1e-93 346.7 337 55.5
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 3.6e-93 345.9 278 64.4
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 6.2e-93 345.1 289 60.9
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 1.4e-92 344.0 358 56.4
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 2.4e-92 343.2 290 59.7
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 3.1e-92 342.8 288 60.8
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 5.3e-92 342.0 292 59.6
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 1.5e-91 340.5 292 59.2
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 2.6e-91 339.7 265 64.2
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 3.4e-91 339.3 329 55.0
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 4.4e-91 339.0 284 62.0
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 9.9e-91 337.8 342 55.6
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 2.2e-90 336.7 380 51.1
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 7.1e-89 331.6 403 48.4
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 1.6e-88 330.5 267 62.9
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 6.0e-88 328.6 291 59.1
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 7.8e-88 328.2 296 57.8
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 3.9e-87 325.9 263 63.1
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 1.1e-86 324.3 334 53.3
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 2.5e-86 323.2 357 51.5
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 4.3e-86 322.4 284 58.5
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 9.6e-86 321.2 289 57.4
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 1.4e-84 317.4 340 53.5
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 9.0e-84 314.7 263 61.6
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 3.4e-83 312.8 341 50.1
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 4.9e-82 308.9 284 57.0
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 1.1e-78 297.7 222 68.0
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 2.8e-77 293.1 237 61.6
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 1.1e-76 291.2 290 51.4
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 4.5e-75 285.8 263 58.2
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 9.9e-75 284.6 234 62.4
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 1.7e-74 283.9 289 54.7
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 8.4e-74 281.6 206 67.0
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 6.9e-60 235.3 232 53.4
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 3.4e-51 206.5 162 64.2
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 2.5e-49 200.3 227 52.0
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 3.0e-39 166.8 140 61.4
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 5.7e-30 136.0 298 33.9
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 5.7e-22 109.4 281 29.2
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 2.7e-19 100.5 211 36.0
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 2.5e-17 94.0 78 61.5
Pp3c7_25590 Physcomitrium patens HOM05D037891 ORTHO05D008297 3.5e-11 73.6 300 29.0
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 6.6e-10 69.3 93 49.5
SMO300G0012 Selaginella moellendorffii HOM05D006917 ORTHO05D008297 1.2e-08 65.1 259 26.6
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 1.6e-08 64.7 67 47.8
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 6.1e-08 62.8 55 56.4
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 8.9e-07 58.9 59 54.2


User provided reference genes

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