Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G142336 Populus trichocarpa HOM05D000388 ORTHO05D009843 8.4e-51 203.4 101 100.0
Sed0009296 Sechium edule HOM05D000388 ORTHO05D009843 5.1e-48 194.1 101 95.0
Sed0020360 Sechium edule HOM05D000388 ORTHO05D009843 5.1e-48 194.1 101 95.0
RcHm_v2.0_CPg0502271 Rosa chinensis HOM05D000388 ORTHO05D009843 6.7e-48 193.7 101 95.0
Migut.D01348 Erythranthe guttata HOM05D000388 ORTHO05D009843 8.7e-48 193.4 101 95.0
Migut.J01359 Erythranthe guttata HOM05D000388 ORTHO05D009843 8.7e-48 193.4 101 95.0
Hma1.2p1_0051F.1_g029490 Hydrangea macrophylla HOM05D000388 ORTHO05D009843 1.9e-47 192.2 101 95.0
RcHm_v2.0_Chr3g0491801 Rosa chinensis HOM05D000388 ORTHO05D009843 2.5e-47 191.8 101 93.1
CAN.G142.10 Capsicum annuum HOM05D000388 ORTHO05D009843 1.3e-46 189.5 101 94.1
CAN.G500.81 Capsicum annuum HOM05D000388 ORTHO05D009843 1.3e-46 189.5 101 94.1
CAN.G653.5 Capsicum annuum HOM05D000388 ORTHO05D009843 1.3e-46 189.5 101 94.1
Lalb_Chr23g0270511 Lupinus albus HOM05D000388 ORTHO05D009843 1.3e-46 189.5 101 94.1
Nn020s41509 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.3e-46 189.5 101 94.1
Nn055s41931 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.3e-46 189.5 101 94.1
Nn082s42681 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.3e-46 189.5 101 94.1
Nn287s46145 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.3e-46 189.5 101 94.1
BcaC04g20699 Brassica carinata HOM05D000388 ORTHO05D009843 2.8e-46 188.3 101 91.1
HanXRQChr00c0272g0573001 Helianthus annuus HOM05D000388 ORTHO05D009843 2.8e-46 188.3 101 93.1
HanXRQChr00c0439g0574751 Helianthus annuus HOM05D000388 ORTHO05D009843 2.8e-46 188.3 101 93.1
HanXRQChr02g0041691 Helianthus annuus HOM05D000388 ORTHO05D009843 2.8e-46 188.3 101 93.1
HanXRQChr04g0099341 Helianthus annuus HOM05D000388 ORTHO05D009843 2.8e-46 188.3 101 93.1
HanXRQChr05g0151391 Helianthus annuus HOM05D000388 ORTHO05D009843 2.8e-46 188.3 101 93.1
HanXRQChr07g0201051 Helianthus annuus HOM05D000388 ORTHO05D009843 2.8e-46 188.3 101 93.1
HanXRQChr08g0210251 Helianthus annuus HOM05D000388 ORTHO05D009843 2.8e-46 188.3 101 93.1
HanXRQChr10g0282451 Helianthus annuus HOM05D000388 ORTHO05D009843 2.8e-46 188.3 101 93.1
HanXRQChr11g0326691 Helianthus annuus HOM05D000388 ORTHO05D009843 2.8e-46 188.3 101 93.1
HanXRQCPg0579911 Helianthus annuus HOM05D000388 ORTHO05D009843 2.8e-46 188.3 101 93.1
Gohir.D08G129080 Gossypium hirsutum HOM05D000388 ORTHO05D009843 4.8e-46 187.6 101 92.1
CARHR281990 Cardamine hirsuta HOM05D000388 ORTHO05D009843 8.1e-46 186.8 101 90.1
PGR111G0009 Punica granatum HOM05D000388 ORTHO05D009843 1.4e-45 186.0 101 92.1
Solyc00g500055.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 1.4e-45 186.0 99 94.9
Solyc00g500137.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 1.4e-45 186.0 99 94.9
Solyc00g500207.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 1.4e-45 186.0 99 94.9
AL2G20790 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 2.4e-45 185.3 101 90.1
ATCG00330 Arabidopsis thaliana HOM05D000388 ORTHO05D009843 2.4e-45 185.3 101 90.1
LjContig00318g0006350 Lotus japonicus HOM05D000388 ORTHO05D009843 3.1e-45 184.9 101 91.1
BNapus_Darmor_BZH_scaffold_253p00110 Brassica napus HOM05D000388 ORTHO05D009843 1.2e-44 183.0 101 89.1
BNapus_Darmor_BZH_scaffold_287p00030 Brassica napus HOM05D000388 ORTHO05D000473 1.2e-44 183.0 101 89.1
C09p40130 Brassica napus HOM05D000388 ORTHO05D009843 1.2e-44 183.0 101 89.1
BolC7t41727H Brassica oleracea HOM05D000388 ORTHO05D000473 1.2e-44 183.0 101 89.1
BolSC29t60455H Brassica oleracea HOM05D000388 ORTHO05D000473 1.2e-44 183.0 101 89.1
BolSC45t60943H Brassica oleracea HOM05D000388 ORTHO05D000473 1.2e-44 183.0 101 89.1
BolSC46t60990H Brassica oleracea HOM05D000388 ORTHO05D000473 1.2e-44 183.0 101 89.1
BraSC140t45581Z Brassica rapa HOM05D000388 ORTHO05D000473 1.2e-44 183.0 101 89.1
BraSC151t45706Z Brassica rapa HOM05D000388 ORTHO05D009843 1.2e-44 183.0 101 89.1
BraSC179t45796Z Brassica rapa HOM05D000388 ORTHO05D000473 1.2e-44 183.0 101 89.1
PSO548G0009 Papaver somniferum HOM05D000388 ORTHO05D009843 2.0e-44 182.2 101 90.1
Gohir.A03G019500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 4.5e-44 181.0 101 90.1
Thhalv10011029m.g Eutrema salsugineum HOM05D000388 ORTHO05D009843 1.0e-43 179.9 101 89.1
DCAR_032482 Daucus carota HOM05D000388 ORTHO05D009843 2.9e-43 178.3 101 89.1
Gohir.A05G086166 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.1e-42 176.4 101 88.1
TWI15G0535 Tripterygium wilfordii HOM05D000388 ORTHO05D009843 4.2e-42 174.5 101 87.1
arahy.Tifrunner.gnm1.ann1.6B1C4L Arachis hypogaea HOM05D000388 ORTHO05D009843 5.5e-42 174.1 98 89.8
AL2G21360 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 9.3e-42 173.3 99 86.9
CAN.G679.7 Capsicum annuum HOM05D000388 ORTHO05D009843 1.2e-41 172.9 101 87.1
Sed0021792 Sechium edule HOM05D000388 ORTHO05D009843 1.2e-41 172.9 101 86.1
A06p23300 Brassica napus HOM05D000388 ORTHO05D000473 6.0e-41 170.6 97 85.6
Gohir.A01G140300 Gossypium hirsutum HOM05D000388 ORTHO05D009843 6.0e-41 170.6 101 84.2
CiPaw.10G111400 Carya illinoinensis HOM05D000388 ORTHO05D009843 1.3e-40 169.5 88 93.2
BolC9t56909H Brassica oleracea HOM05D000388 ORTHO05D009843 2.3e-40 168.7 94 88.3
EL10Ac1g02280 Beta vulgaris HOM05D000388 ORTHO05D009843 3.0e-40 168.3 101 88.1
Gohir.D09G055500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.5e-39 166.0 101 82.2
Gohir.A01G164720 Gossypium hirsutum HOM05D000388 ORTHO05D009843 4.3e-39 164.5 100 85.0
Medtr3g035610 Medicago truncatula HOM05D000388 ORTHO05D009843 1.3e-38 162.9 101 83.2
Nitab4.5_0025922g0010 Nicotiana tabacum HOM05D000388 ORTHO05D009843 1.3e-38 162.9 84 97.6
TAR629G1277 Trochodendron aralioides HOM05D000388 ORTHO05D009843 1.3e-38 162.9 84 97.6
LjContig00489g0027265 Lotus japonicus HOM05D000388 ORTHO05D009843 2.1e-38 162.2 101 80.2
Nitab4.5_0007186g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009843 2.1e-38 162.2 91 90.1
Oeu062844.1 Olea europaea HOM05D000388 ORTHO05D009843 6.3e-38 160.6 99 82.8
Oeu017222.1 Olea europaea HOM05D000388 ORTHO05D009843 1.8e-37 159.1 101 81.2
SEGI_01256 Sequoiadendron giganteum HOM05D000388 ORTHO05D009843 2.5e-34 148.7 101 74.3
Eucgr.C02020 Eucalyptus grandis HOM05D000388 ORTHO05D009843 9.3e-34 146.7 93 80.6
CSS0013534 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D009843 1.6e-33 146.0 89 87.6
Peaxi162Scf00575g00006 Petunia axillaris HOM05D000388 ORTHO05D009843 1.8e-32 142.5 70 94.3
CAN.G386.18 Capsicum annuum HOM05D000388 ORTHO05D000473 2.3e-32 142.1 74 90.5
Peaxi162Scf00455g00046 Petunia axillaris HOM05D000388 ORTHO05D009843 3.9e-32 141.4 76 93.4
BolSC44t60854H Brassica oleracea HOM05D000388 ORTHO05D009843 3.3e-31 138.3 94 72.3
Hund28396 Selenicereus undatus HOM05D000388 ORTHO05D009843 7.4e-31 137.1 74 90.5
arahy.Tifrunner.gnm1.ann1.FC7Y3W Arachis hypogaea HOM05D000388 ORTHO05D009843 5.9e-28 127.5 97 70.1
SMO086G0040 Selaginella moellendorffii HOM05D000388 ORTHO05D009843 5.9e-28 127.5 99 62.6
Gohir.A07G155821 Gossypium hirsutum HOM05D000388 ORTHO05D009843 5.0e-27 124.4 72 87.5
HanXRQChr00c0345g0573851 Helianthus annuus HOM05D000388 ORTHO05D009843 2.3e-24 115.5 56 94.6
EL10As15g24141 Beta vulgaris HOM05D000388 ORTHO05D009843 5.1e-24 114.4 65 92.3
Nitab4.5_0002607g0050 Nicotiana tabacum HOM05D000388 ORTHO05D009843 9.7e-23 110.2 66 89.4
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 7.7e-20 100.5 72 70.8
HanXRQChr16g0506261 Helianthus annuus HOM05D000388 ORTHO05D009843 1.3e-19 99.8 57 91.2
Phvul.010G068900 Phaseolus vulgaris HOM05D000388 ORTHO05D009843 1.2e-17 93.2 48 87.5
CsaV3_6G032160 Cucumis sativus L. HOM05D000388 ORTHO05D009843 4.7e-17 91.3 91 61.5
Medtr5g063380 Medicago truncatula HOM05D000388 ORTHO05D009843 2.0e-15 85.9 48 85.4
Hund29903 Selenicereus undatus HOM05D000388 ORTHO05D009843 3.7e-14 81.6 51 88.2
Medtr8g079770 Medicago truncatula HOM05D000388 ORTHO05D009843 1.2e-12 76.6 51 80.4
arahy.Tifrunner.gnm1.ann1.A3NG1I Arachis hypogaea HOM05D000388 ORTHO05D009843 2.2e-11 72.4 95 48.4
arahy.Tifrunner.gnm1.ann1.90KAHV Arachis hypogaea HOM05D000388 ORTHO05D009843 1.1e-10 70.1 97 50.5
Sopen10g013070 Solanum pennellii HOM05D000388 ORTHO05D009843 5.5e-10 67.8 36 80.6
BolC9t56932H Brassica oleracea HOM05D000388 ORTHO05D009843 1.1e-07 60.1 27 96.3
arahy.Tifrunner.gnm1.ann1.EPB7VR Arachis hypogaea HOM05D000176 ORTHO05D000106 9.7e-07 57.0 25 96.0
EL10Ac3g05283 Beta vulgaris HOM05D007099 ORTHO05D009081 9.7e-07 57.0 92 43.5
HanXRQChr00c0586g0576301 Helianthus annuus HOM05D000388 ORTHO05D009843 2.8e-06 55.5 83 48.2
Sed0026927 Sechium edule HOM05D007099 ORTHO05D009081 2.8e-06 55.5 91 42.9
Aqoxy12s037 Aquilegia oxysepala HOM05D007099 ORTHO05D009081 4.8e-06 54.7 95 44.2
FvH4_7g06080 Fragaria vesca HOM05D007099 ORTHO05D009081 4.8e-06 54.7 103 36.9
Hund03588 Selenicereus undatus HOM05D007099 ORTHO05D009081 4.8e-06 54.7 92 42.4
Hund07474 Selenicereus undatus HOM05D007099 ORTHO05D009081 4.8e-06 54.7 92 42.4
CAN.G371.64 Capsicum annuum HOM05D007099 ORTHO05D009081 6.3e-06 54.3 94 37.2
ClCG08G008070 Citrullus lanatus HOM05D007099 ORTHO05D009081 6.3e-06 54.3 90 40.0
Potri.001G424950 Populus trichocarpa HOM05D007099 ORTHO05D009081 8.2e-06 53.9 95 37.9
Solyc04g079380.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 8.2e-06 53.9 94 37.2
Sopen04g032990 Solanum pennellii HOM05D007099 ORTHO05D009081 8.2e-06 53.9 94 37.2
PGSC0003DMG400007997 Solanum tuberosum HOM05D007099 ORTHO05D009081 8.2e-06 53.9 94 37.2


User provided reference genes

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