Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 9.0e-84 313.5 158 100.0
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 4.5e-83 311.2 158 99.4
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 9.7e-78 293.5 158 93.0
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 2.9e-66 255.4 158 77.2
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 5.0e-66 254.6 158 77.8
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 5.0e-66 254.6 158 78.5
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 6.5e-66 254.2 158 77.8
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 2.5e-65 252.3 158 77.8
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 3.2e-65 251.9 158 79.1
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 2.7e-64 248.8 158 75.9
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 3.6e-64 248.4 153 78.4
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 6.1e-64 247.7 160 77.5
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 6.1e-64 247.7 153 78.4
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 7.9e-64 247.3 153 78.4
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 1.0e-63 246.9 155 77.4
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 1.8e-63 246.1 153 75.2
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 3.9e-63 245.0 153 77.1
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 5.1e-63 244.6 156 74.4
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 5.1e-63 244.6 158 72.8
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 1.5e-62 243.0 159 76.1
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 2.6e-62 242.3 156 75.0
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 2.6e-62 242.3 153 79.1
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 7.4e-62 240.7 158 75.3
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 7.4e-62 240.7 153 77.8
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 9.7e-62 240.4 153 77.8
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 1.3e-61 240.0 153 76.5
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 1.3e-61 240.0 153 76.5
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 1.7e-61 239.6 157 72.0
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 2.2e-61 239.2 153 75.8
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 3.7e-61 238.4 153 74.5
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 3.7e-61 238.4 153 75.2
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 6.3e-61 237.7 153 74.5
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 6.3e-61 237.7 153 77.1
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 8.2e-61 237.3 158 72.8
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 1.1e-60 236.9 159 74.2
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 1.8e-60 236.1 175 69.1
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 2.4e-60 235.7 153 73.9
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 4.1e-60 235.0 157 72.0
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 5.3e-60 234.6 154 74.7
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 9.1e-60 233.8 153 73.2
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 9.1e-60 233.8 153 73.9
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 1.2e-59 233.4 153 74.5
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 1.2e-59 233.4 154 76.6
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 1.2e-59 233.4 154 76.6
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 1.6e-59 233.0 153 73.2
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 2.6e-59 232.3 159 73.6
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 4.5e-59 231.5 156 75.6
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 5.9e-59 231.1 158 74.1
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 5.9e-59 231.1 153 71.9
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 1.3e-58 229.9 157 70.7
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.3e-58 229.9 159 73.0
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 1.7e-58 229.6 159 72.3
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 3.8e-58 228.4 158 70.9
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 5.0e-58 228.0 153 72.5
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 1.1e-57 226.9 154 74.0
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 1.5e-57 226.5 153 68.0
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 1.5e-57 226.5 156 73.1
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 4.2e-57 224.9 146 75.3
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 4.2e-57 224.9 158 73.4
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 4.2e-57 224.9 157 67.5
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 5.5e-57 224.6 148 73.0
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 5.5e-57 224.6 152 73.7
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 7.2e-57 224.2 158 72.8
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 7.2e-57 224.2 153 69.3
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 9.4e-57 223.8 148 72.3
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 9.4e-57 223.8 151 71.5
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 1.2e-56 223.4 158 72.8
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 2.7e-56 222.2 165 67.3
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 3.6e-56 221.9 148 71.6
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 4.7e-56 221.5 153 70.6
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 4.7e-56 221.5 158 71.5
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 8.0e-56 220.7 153 68.6
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 2.3e-55 219.2 158 71.5
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 4.0e-55 218.4 158 70.9
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 2.0e-54 216.1 134 77.6
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 2.6e-54 215.7 157 67.5
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 2.6e-54 215.7 157 67.5
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 4.4e-54 214.9 149 68.5
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 4.4e-54 214.9 153 70.6
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 5.7e-54 214.5 154 70.1
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 5.7e-54 214.5 154 69.5
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 2.2e-53 212.6 154 67.5
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 4.8e-53 211.5 154 67.5
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 6.3e-53 211.1 154 66.9
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 1.1e-52 210.3 157 67.5
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 1.4e-52 209.9 148 66.2
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 7.0e-52 207.6 158 67.7
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 5.0e-50 201.4 158 65.2
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 5.0e-50 201.4 156 60.9
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 9.4e-49 197.2 151 62.9
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 1.6e-48 196.4 182 59.3
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 4.7e-48 194.9 136 68.4
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 8.0e-48 194.1 151 62.9
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 8.0e-48 194.1 151 62.9
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 4.0e-47 191.8 156 62.8
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 6.8e-47 191.0 134 69.4
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 4.8e-45 184.9 154 58.4
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 6.1e-40 167.9 98 81.6
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 6.1e-40 167.9 164 52.4
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 3.7e-37 158.7 152 55.9
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 4.1e-36 155.2 81 93.8
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 4.1e-36 155.2 81 93.8
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 7.0e-36 154.5 108 70.4
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 2.0e-35 152.9 107 70.1
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 1.7e-34 149.8 93 76.3
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 3.3e-33 145.6 88 79.5
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 1.6e-32 143.3 81 88.9
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 4.4e-30 135.2 146 49.3
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 1.6e-27 126.7 78 74.4
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 4.6e-27 125.2 82 74.4
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 4.0e-23 112.1 78 70.5
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 7.5e-22 107.8 86 65.1
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 7.8e-19 97.8 67 70.1
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 4.3e-17 92.0 70 64.3
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 2.1e-16 89.7 97 49.5
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 4.1e-12 75.5 50 62.0
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 3.3e-09 65.9 78 46.2
Os01g0610400 Oryza sativa ssp. japonica HOM05D004398 ORTHO05D005268 3.4e-06 55.8 126 29.4


User provided reference genes

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