Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G131900 Populus trichocarpa HOM05D005953 ORTHO05D004056 1.2e-24 115.9 71 100.0
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 9.2e-20 99.8 71 74.6
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 5.1e-18 94.0 71 70.4
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 8.1e-16 86.7 73 75.3
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 2.5e-09 65.1 77 66.2
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.3e-09 64.7 73 54.8
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 1.2e-08 62.8 73 52.1
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 1.6e-08 62.4 76 48.7
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 4.7e-08 60.8 71 49.3
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 4.7e-08 60.8 76 56.6
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 8.1e-08 60.1 71 49.3
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 8.1e-08 60.1 71 49.3
Phvul.011G114200 Phaseolus vulgaris HOM05D005953 ORTHO05D004056 8.1e-08 60.1 75 50.7
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 1.1e-07 59.7 71 50.7
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 1.8e-07 58.9 79 50.6
PGR042G2028 Punica granatum HOM05D005953 ORTHO05D004056 2.4e-07 58.5 90 44.4
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 2.4e-07 58.5 72 50.0
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 5.2e-07 57.4 75 48.0
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 5.2e-07 57.4 75 48.0
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 6.8e-07 57.0 78 44.9
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 1.2e-06 56.2 69 49.3
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 1.5e-06 55.8 76 60.5
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 1.5e-06 55.8 79 49.4
Glyma.06G293200 Glycine max HOM05D005953 ORTHO05D004056 2.0e-06 55.5 75 58.7
Cfa014612 Carpinus fangiana HOM05D005953 ORTHO05D004056 2.6e-06 55.1 73 58.9
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.4e-06 54.7 75 46.7
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 3.4e-06 54.7 69 47.8
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.4e-06 54.7 69 47.8
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.4e-06 54.7 69 47.8
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.4e-06 54.7 69 47.8
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 3.4e-06 54.7 75 54.7
arahy.Tifrunner.gnm1.ann1.4Y3SQC Arachis hypogaea HOM05D005953 ORTHO05D004056 4.4e-06 54.3 69 60.9
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 4.4e-06 54.3 75 48.0
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 4.4e-06 54.3 82 54.9
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 7.6e-06 53.5 75 46.7
ECA233G3589 Erigeron canadensis HOM05D000020 ORTHO05D000543 7.6e-06 53.5 64 48.4
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 7.6e-06 53.5 75 46.7
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 9.9e-06 53.1 72 47.2
Gorai.005G201700 Gossypium raimondii HOM05D025024 ORTHO05D004056 9.9e-06 53.1 69 46.4


User provided reference genes

Program Settings