Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 6.5e-51 203.8 102 100.0
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 9.1e-45 183.3 103 91.3
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 2.9e-43 178.3 103 89.3
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 4.7e-41 171.0 97 88.7
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 2.0e-39 165.6 102 85.3
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 3.3e-39 164.9 103 83.5
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 3.7e-38 161.4 102 80.4
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 1.1e-37 159.8 100 83.0
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 3.1e-37 158.3 101 80.2
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 9.1e-37 156.8 101 79.2
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 4.5e-36 154.5 102 77.5
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 1.0e-35 153.3 102 76.5
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 6.5e-35 150.6 102 78.4
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 1.5e-34 149.4 102 78.4
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.5e-34 149.4 101 73.3
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 1.5e-34 149.4 102 74.5
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 2.5e-34 148.7 102 72.5
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 2.5e-34 148.7 102 75.5
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 3.2e-34 148.3 102 76.5
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 5.5e-34 147.5 101 77.2
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 5.5e-34 147.5 102 74.5
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 7.2e-34 147.1 102 74.5
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 7.2e-34 147.1 102 74.5
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 7.2e-34 147.1 102 74.5
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 1.2e-33 146.4 102 76.5
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 1.6e-33 146.0 101 75.2
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 2.1e-33 145.6 102 75.5
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 2.7e-33 145.2 102 74.5
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 4.7e-33 144.4 102 74.5
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 6.1e-33 144.1 103 74.8
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 1.0e-32 143.3 101 74.3
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 1.0e-32 143.3 102 73.5
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 1.4e-32 142.9 102 74.5
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 1.8e-32 142.5 102 74.5
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 2.3e-32 142.1 102 75.5
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 2.3e-32 142.1 102 72.5
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 3.0e-32 141.7 102 73.5
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 2.0e-31 139.0 99 72.7
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 3.4e-31 138.3 102 71.6
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 7.5e-31 137.1 99 71.7
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 9.8e-31 136.7 104 73.1
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 1.7e-30 136.0 102 72.5
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 1.7e-30 136.0 99 70.7
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 2.2e-30 135.6 103 71.8
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 2.8e-30 135.2 95 72.6
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 2.8e-30 135.2 104 69.2
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 3.7e-30 134.8 104 69.2
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 3.7e-30 134.8 102 72.5
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 4.8e-30 134.4 103 69.9
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 6.3e-30 134.0 104 69.2
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 8.3e-30 133.7 98 74.5
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 1.1e-29 133.3 102 71.6
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 1.8e-29 132.5 101 71.3
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 2.4e-29 132.1 103 68.9
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 2.4e-29 132.1 102 70.6
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 4.1e-29 131.3 101 73.3
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 4.1e-29 131.3 102 72.5
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 4.1e-29 131.3 98 71.4
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 4.1e-29 131.3 98 71.4
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 7.0e-29 130.6 102 70.6
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 7.0e-29 130.6 105 68.6
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 9.1e-29 130.2 102 70.6
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 1.2e-28 129.8 98 70.4
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 1.6e-28 129.4 95 71.6
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 1.6e-28 129.4 101 70.3
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 2.0e-28 129.0 95 71.6
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 2.0e-28 129.0 95 69.5
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 2.7e-28 128.6 93 72.0
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 3.5e-28 128.3 100 68.0
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 7.7e-28 127.1 92 72.8
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 7.7e-28 127.1 103 67.0
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 1.7e-27 125.9 95 69.5
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 2.3e-27 125.6 99 68.7
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 2.9e-27 125.2 99 68.7
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 2.9e-27 125.2 99 68.7
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 5.0e-27 124.4 95 69.5
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 1.5e-26 122.9 95 68.4
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 1.9e-26 122.5 99 67.7
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 4.2e-26 121.3 95 69.5
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 5.5e-26 120.9 102 64.7
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 2.1e-25 119.0 100 62.0
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 1.8e-24 115.9 98 67.3
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 1.8e-24 115.9 98 67.3
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 1.8e-24 115.9 98 67.3
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 1.8e-24 115.9 95 69.5
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 6.8e-24 114.0 98 66.3
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 2.6e-23 112.1 103 63.1
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 8.3e-22 107.1 95 57.9
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 1.2e-20 103.2 100 56.0
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 4.5e-20 101.3 84 63.1
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 1.0e-19 100.1 106 58.5
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 2.9e-19 98.6 91 64.8
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 8.6e-19 97.1 80 66.2
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 9.5e-18 93.6 64 78.1
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 6.1e-17 90.9 76 67.1
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 1.4e-16 89.7 93 57.0
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 3.0e-16 88.6 95 52.6
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 3.7e-14 81.6 88 53.4
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 1.6e-12 76.3 100 52.0
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.8e-08 62.8 61 57.4
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 3.4e-07 58.5 106 37.7


User provided reference genes

Program Settings