Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G109701 Populus trichocarpa HOM05D008040 ORTHO05D010075 3.0e-176 621.7 306 100.0
Potri.013G109900 Populus trichocarpa HOM05D008040 ORTHO05D010075 2.3e-120 436.0 226 92.0
Potri.013G110300 Populus trichocarpa HOM05D008040 ORTHO05D010075 2.4e-117 426.0 226 90.3
Sabra01G0123600 Salix brachista HOM05D008040 ORTHO05D010075 4.7e-28 129.4 250 37.6
TWI77G0815 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 4.4e-26 122.9 231 36.8
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 5.7e-26 122.5 218 35.8
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 8.3e-25 118.6 266 32.7
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.4e-24 117.9 206 34.0
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.4e-24 117.1 202 33.2
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 4.1e-24 116.3 266 32.0
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 3.5e-23 113.2 212 34.9
COL.COLO4_31567 Corchorus olitorius HOM05D008040 ORTHO05D010075 4.5e-23 112.8 213 31.5
TWI12G0410 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 4.5e-23 112.8 225 34.7
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 1.7e-22 110.9 226 35.0
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.1e-21 108.2 210 32.4
COL.COLO4_31563 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.1e-21 108.2 211 31.3
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.9e-21 107.5 211 33.2
PSO761G0098 Papaver somniferum HOM05D008040 ORTHO05D010075 1.9e-21 107.5 221 34.8
QL04p017640 Quercus lobata HOM05D008040 ORTHO05D010075 1.2e-20 104.8 209 36.4
QL04p017690 Quercus lobata HOM05D008040 ORTHO05D010075 1.6e-20 104.4 209 36.4
COL.COLO4_30844 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.4e-19 101.3 211 29.9
Manes.09G072126 Manihot esculenta HOM05D008040 ORTHO05D010075 5.2e-19 99.4 225 32.0
PSO339G3463 Papaver somniferum HOM05D008040 ORTHO05D010075 2.0e-18 97.4 187 34.8
Ciclev10022884m.g Citrus clementina HOM05D008040 ORTHO05D010075 6.3e-17 92.4 114 43.9
PSO017G2897 Papaver somniferum HOM05D008040 ORTHO05D010075 1.4e-16 91.3 177 35.0
Ah.06g196070 Amaranthus hybridus HOM05D008040 ORTHO05D010075 4.1e-16 89.7 212 30.7
DCAR_021781 Daucus carota HOM05D008040 ORTHO05D010075 7.0e-16 89.0 213 28.2
Aqoxy3G02433 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 9.1e-16 88.6 197 32.0
EL10Ac2g04156 Beta vulgaris HOM05D008040 ORTHO05D010075 2.7e-15 87.0 189 30.7
Ah.07g206250 Amaranthus hybridus HOM05D008040 ORTHO05D010075 4.5e-15 86.3 206 29.1
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 3.8e-14 83.2 188 31.9
AUR62035995 Chenopodium quinoa HOM05D008040 ORTHO05D010075 6.6e-14 82.4 215 29.3
Ah.02g122840 Amaranthus hybridus HOM05D008040 ORTHO05D010075 8.6e-14 82.0 171 30.4
MBI05_g20724_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 1.9e-13 80.9 241 27.8
RcHm_v2.0_Chr2g0102561 Rosa chinensis HOM05D008040 ORTHO05D010075 2.5e-13 80.5 202 31.7
FAN23G2403 Fragaria x ananassa HOM05D008040 ORTHO05D010075 3.3e-13 80.1 197 29.9
PSO675G8119 Papaver somniferum HOM05D008040 ORTHO05D010075 7.2e-13 79.0 164 35.4
AUR62017713 Chenopodium quinoa HOM05D008040 ORTHO05D010075 9.5e-13 78.6 210 27.6
vmacro17323 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 9.5e-13 78.6 143 39.2
Ciclev10026974m.g Citrus clementina HOM05D008040 ORTHO05D010075 1.6e-12 77.8 195 31.8
MBI01_g31985_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 1.6e-12 77.8 229 27.5
Oeu045297.1 Olea europaea HOM05D008040 ORTHO05D010075 1.6e-12 77.8 198 28.8
vmacro17325 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 2.8e-12 77.0 164 34.8
FAN26G0836 Fragaria x ananassa HOM05D008040 ORTHO05D010075 4.7e-12 76.3 215 28.8
Oeu009728.1 Olea europaea HOM05D008040 ORTHO05D010075 6.1e-12 75.9 190 30.0
FvH4_1g14071 Fragaria vesca HOM05D008040 ORTHO05D010075 8.0e-12 75.5 215 29.3
FAN19G2417 Fragaria x ananassa HOM05D008040 ORTHO05D010075 8.0e-12 75.5 215 29.3
Oeu009732.1 Olea europaea HOM05D001586 ORTHO05D001543 1.0e-11 75.1 202 28.7
Nitab4.5_0005142g0030 Nicotiana tabacum HOM05D008040 ORTHO05D010075 5.2e-11 72.8 226 27.9
Prupe.7G151200 Prunus persica HOM05D008040 ORTHO05D010075 8.9e-11 72.0 201 28.9
QL04p017704 Quercus lobata HOM05D008040 ORTHO05D010075 8.9e-11 72.0 140 35.7
SGA_v2.0_scaffold286G47115 Striga asiatica HOM05D008040 ORTHO05D010075 5.7e-10 69.3 194 24.7
RcHm_v2.0_Chr2g0102901 Rosa chinensis HOM05D008040 ORTHO05D010075 9.8e-10 68.6 201 29.9
SGA_v2.0_scaffold286G47111 Striga asiatica HOM05D008040 ORTHO05D010075 1.7e-09 67.8 154 28.6
FAN19G2662 Fragaria x ananassa HOM05D008040 ORTHO05D010075 4.9e-09 66.2 195 28.7
PSO170G5939 Papaver somniferum HOM05D008040 ORTHO05D010075 1.8e-08 64.3 126 34.1
Os05g0177400 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 2.0e-07 60.8 179 28.5
Sopen12g023120 Solanum pennellii HOM05D008706 ORTHO05D010440 3.9e-06 56.6 194 23.7
Sopen12g023140 Solanum pennellii HOM05D008706 ORTHO05D010440 5.0e-06 56.2 194 23.7
CAN.G546.3 Capsicum annuum HOM05D008706 ORTHO05D010440 8.6e-06 55.5 188 25.0


User provided reference genes

Program Settings