Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 6.8e-68 260.4 119 100.0
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 7.1e-41 170.6 119 66.4
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 1.9e-38 162.5 121 67.8
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 1.9e-38 162.5 120 66.7
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 7.4e-38 160.6 77 93.5
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 7.4e-38 160.6 77 93.5
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 2.8e-37 158.7 123 63.4
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 1.8e-36 156.0 126 64.3
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 2.4e-36 155.6 82 86.6
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 3.1e-36 155.2 85 81.2
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 1.2e-35 153.3 90 73.3
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 1.5e-35 152.9 81 82.7
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.5e-35 152.9 114 67.5
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 3.4e-35 151.8 95 75.8
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 5.8e-35 151.0 94 74.5
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 1.7e-34 149.4 76 86.8
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 2.2e-34 149.1 78 85.9
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 2.9e-34 148.7 81 79.0
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 2.9e-34 148.7 121 61.2
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 2.9e-34 148.7 83 81.9
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 2.9e-34 148.7 76 85.5
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 2.9e-34 148.7 82 82.9
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 3.8e-34 148.3 81 80.2
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 4.9e-34 147.9 90 75.6
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 6.5e-34 147.5 84 82.1
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 6.5e-34 147.5 84 82.1
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 6.5e-34 147.5 84 82.1
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 6.5e-34 147.5 76 84.2
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 8.4e-34 147.1 81 81.5
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 8.4e-34 147.1 76 84.2
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 1.1e-33 146.7 73 89.0
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 1.1e-33 146.7 81 79.0
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 1.9e-33 146.0 81 79.0
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 1.9e-33 146.0 83 74.7
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 3.2e-33 145.2 80 78.8
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 4.2e-33 144.8 81 77.8
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 9.3e-33 143.7 81 79.0
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 1.6e-32 142.9 81 76.5
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 2.1e-32 142.5 82 79.3
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 2.7e-32 142.1 85 71.8
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 6.0e-32 141.0 96 67.7
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 1.0e-31 140.2 92 73.9
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 6.7e-31 137.5 77 81.8
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 3.3e-30 135.2 81 79.0
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 2.8e-29 132.1 83 74.7
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 8.2e-29 130.6 61 90.2
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 8.2e-29 130.6 61 90.2
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 1.4e-28 129.8 123 56.1
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 1.8e-28 129.4 97 61.9
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 3.1e-28 128.6 67 82.1
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 3.1e-28 128.6 67 82.1
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 9.0e-28 127.1 73 76.7
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 9.0e-28 127.1 115 58.3
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 2.0e-27 125.9 123 55.3
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 2.0e-27 125.9 113 57.5
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 5.8e-27 124.4 96 64.6
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 7.6e-27 124.0 104 60.6
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 1.0e-26 123.6 73 75.3
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 2.5e-25 119.0 76 75.0
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 3.2e-25 118.6 86 65.1
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 9.3e-25 117.1 113 50.4
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 2.1e-24 115.9 117 52.1
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 3.9e-23 111.7 121 52.1
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.5e-22 109.8 85 62.4
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 4.3e-22 108.2 52 86.5
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 2.2e-21 105.9 114 49.1
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 2.2e-21 105.9 116 51.7
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 1.4e-20 103.2 61 75.4
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 1.5e-19 99.8 45 95.6
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 2.9e-18 95.5 85 54.1
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 6.5e-18 94.4 58 72.4
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 6.5e-18 94.4 46 89.1
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 2.7e-16 89.0 66 63.6
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 3.6e-16 88.6 76 60.5
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 7.9e-16 87.4 106 47.2
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 7.9e-16 87.4 54 77.8
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 1.0e-15 87.0 66 63.6
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 1.8e-15 86.3 76 59.2
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.3e-15 85.9 54 75.9
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 6.7e-15 84.3 62 62.9
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 3.8e-10 68.6 48 66.7
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 4.7e-08 61.6 30 83.3


User provided reference genes

Program Settings