Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G105634 Populus trichocarpa HOM05D003774 ORTHO05D009174 7.5e-155 550.4 269 100.0
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 1.5e-83 313.5 328 57.0
Potri.019G079000 Populus trichocarpa HOM05D003774 ORTHO05D009174 2.6e-67 259.6 326 51.2
Cfa012969 Carpinus fangiana HOM05D003774 ORTHO05D009174 1.4e-47 194.1 283 44.5
Manes.02G198600 Manihot esculenta HOM05D003774 ORTHO05D009174 1.1e-44 184.5 325 40.3
CiPaw.07G235700 Carya illinoinensis HOM05D003774 ORTHO05D009174 3.1e-44 183.0 278 41.4
QL02p014374 Quercus lobata HOM05D003774 ORTHO05D009174 4.5e-43 179.1 325 39.1
COL.COLO4_24651 Corchorus olitorius HOM05D003774 ORTHO05D009174 7.7e-43 178.3 325 38.5
RcHm_v2.0_Chr7g0227151 Rosa chinensis HOM05D003774 ORTHO05D009174 1.7e-42 177.2 269 43.1
Haze_21313 Corylus avellana HOM05D003774 ORTHO05D009174 6.5e-42 175.3 250 46.0
Phvul.005G000200 Phaseolus vulgaris HOM05D003774 ORTHO05D009174 1.5e-41 174.1 270 39.6
Thecc.08G192500 Theobroma cacao HOM05D003774 ORTHO05D009174 3.2e-41 172.9 325 38.8
FvH4_5g31620 Fragaria vesca HOM05D003774 ORTHO05D009174 1.2e-40 171.0 292 40.1
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 1.6e-40 170.6 269 41.6
Glyma.06G325100 Glycine max HOM05D003774 ORTHO05D009174 2.1e-40 170.2 285 38.6
VMungo1080G0925 Vigna mungo HOM05D003774 ORTHO05D009174 2.1e-40 170.2 278 39.6
Duzib211G0171 Durio zibethinus HOM05D003774 ORTHO05D009174 6.1e-40 168.7 299 40.1
TAR624G0812 Trochodendron aralioides HOM05D003774 ORTHO05D009174 8.0e-40 168.3 288 39.6
Gohir.D13G122800 Gossypium hirsutum HOM05D003774 ORTHO05D009174 1.4e-39 167.5 281 40.6
Atru.chr13.2367 Acer truncatum HOM05D003774 ORTHO05D009174 6.8e-39 165.2 272 40.1
GSVIVG01026084001 Vitis vinifera HOM05D003774 ORTHO05D009174 6.8e-39 165.2 323 35.3
TWI59G1355 Tripterygium wilfordii HOM05D003774 ORTHO05D009174 8.8e-39 164.9 286 39.9
Ciclev10001943m.g Citrus clementina HOM05D003774 ORTHO05D009174 1.5e-38 164.1 293 40.6
Gorai.013G137800 Gossypium raimondii HOM05D003774 ORTHO05D009174 1.5e-38 164.1 270 40.4
FAN22G1282 Fragaria x ananassa HOM05D003774 ORTHO05D009174 2.6e-38 163.3 269 40.9
Prupe.1G555600 Prunus persica HOM05D003774 ORTHO05D009174 4.4e-38 162.5 329 38.3
CANSAT25G3020 Cannabis sativa HOM05D003774 ORTHO05D009174 7.5e-38 161.8 280 38.2
MBI09_g10676_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D009174 1.3e-37 161.0 270 40.7
DCAR_003529 Daucus carota HOM05D003774 ORTHO05D009174 4.8e-37 159.1 255 38.4
Lj3g0005610 Lotus japonicus HOM05D003774 ORTHO05D009174 4.8e-37 159.1 290 35.5
Gohir.A13G119000 Gossypium hirsutum HOM05D003774 ORTHO05D009174 2.4e-36 156.8 270 40.0
Rhsim11G0052900 Rhododendron simsii HOM05D003774 ORTHO05D009174 9.1e-36 154.8 251 39.8
TPR.G25492 Trifolium pratense HOM05D003774 ORTHO05D009174 9.1e-36 154.8 270 35.6
Nn1g08406 Nelumbo nucifera HOM05D003774 ORTHO05D009174 2.0e-35 153.7 330 35.8
Psat1g003280 Pisum sativum HOM05D003774 ORTHO05D009174 2.7e-35 153.3 283 35.3
Medtr3g005060 Medicago truncatula HOM05D003774 ORTHO05D009174 3.5e-35 152.9 285 35.8
Oeu013896.2 Olea europaea HOM05D003774 ORTHO05D009174 2.9e-34 149.8 252 38.9
Cc10_g09600 Coffea canephora HOM05D003774 ORTHO05D009174 5.0e-34 149.1 330 35.2
Actinidia29410 Actinidia chinensis HOM05D003774 ORTHO05D009174 3.2e-33 146.4 276 37.3
PSO170G6059 Papaver somniferum HOM05D003774 ORTHO05D009174 5.5e-33 145.6 272 36.8
PGR042G3286 Punica granatum HOM05D003774 ORTHO05D009174 1.2e-32 144.4 299 38.5
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 6.1e-32 142.1 278 36.0
Lsat_1_v5_gn_1_25820 Lactuca sativa HOM05D003774 ORTHO05D009174 1.0e-31 141.4 281 36.3
Nitab4.5_0005616g0010 Nicotiana tabacum HOM05D003774 ORTHO05D009174 3.0e-31 139.8 249 38.2
PSO017G5271 Papaver somniferum HOM05D003774 ORTHO05D009174 3.0e-31 139.8 272 35.7
MD08G1217800 Malus domestica HOM05D003774 ORTHO05D009174 5.2e-31 139.0 254 39.4
PGSC0003DMG402025647 Solanum tuberosum HOM05D003774 ORTHO05D009174 8.8e-31 138.3 246 39.0
HanXRQChr02g0036581 Helianthus annuus HOM05D003774 ORTHO05D009174 1.2e-30 137.9 281 34.9
Nitab4.5_0001463g0050 Nicotiana tabacum HOM05D003774 ORTHO05D009174 1.2e-30 137.9 249 38.6
Sopen11g022610 Solanum pennellii HOM05D003774 ORTHO05D009174 2.0e-30 137.1 246 38.6
Aqoxy5G02648 Aquilegia oxysepala HOM05D003774 ORTHO05D009174 2.6e-30 136.7 268 35.4
EL10Ac1g00136 Beta vulgaris HOM05D003774 ORTHO05D009174 5.7e-30 135.6 249 38.6
CDE02G0175 Ceratophyllum demersum HOM05D003774 ORTHO05D009174 3.7e-29 132.9 243 38.3
HPP92_011935 Vanilla planifolia HOM05D003774 ORTHO05D009174 6.3e-29 132.1 244 35.7
HPP92_011955 Vanilla planifolia HOM05D003774 ORTHO05D009174 6.3e-29 132.1 244 35.7
MSTRG.22470 Avicennia marina HOM05D003774 ORTHO05D009174 8.3e-29 131.7 253 35.6
Zm00001eb348780 Zea mays HOM05D003774 ORTHO05D009174 1.1e-28 131.3 260 37.3
Solyc11g027840.2 Solanum lycopersicum HOM05D003774 ORTHO05D009174 1.4e-28 131.0 246 37.8
Eucgr.F02990 Eucalyptus grandis HOM05D003774 ORTHO05D009174 1.8e-28 130.6 266 36.1
Dinv19855 Davidia involucrata HOM05D003774 ORTHO05D009174 4.1e-28 129.4 208 42.3
ClCG08G000170 Citrullus lanatus HOM05D003774 ORTHO05D009174 5.4e-28 129.0 240 37.1
CDE08G0174 Ceratophyllum demersum HOM05D003774 ORTHO05D009174 7.0e-28 128.6 287 34.5
AUR62023544 Chenopodium quinoa HOM05D003774 ORTHO05D009174 1.2e-27 127.9 250 36.8
THA.LOC104816521 Tarenaya hassleriana HOM05D003774 ORTHO05D009174 4.5e-27 125.9 315 31.7
ATR0320G028 Amborella trichopoda HOM05D003774 ORTHO05D009174 5.9e-27 125.6 335 33.4
AUR62004600 Chenopodium quinoa HOM05D003774 ORTHO05D009174 1.0e-26 124.8 247 36.0
Ah.05g178580 Amaranthus hybridus HOM05D003774 ORTHO05D009174 1.3e-26 124.4 283 36.0
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 2.9e-26 123.2 300 33.0
Sp1g30140 Schrenkiella parvula HOM05D003774 ORTHO05D009174 3.8e-26 122.9 299 34.1
CARHR034180 Cardamine hirsuta HOM05D003774 ORTHO05D009174 5.0e-26 122.5 262 34.7
CSS0038880 Camellia sinensis var. sinensis HOM05D003774 ORTHO05D009174 1.5e-25 120.9 140 48.6
MELO3C022228.2 Cucumis melo HOM05D003774 ORTHO05D009174 5.6e-25 119.0 256 34.8
CsaV3_5G040550 Cucumis sativus L. HOM05D003774 ORTHO05D009174 7.3e-25 118.6 242 35.1
Migut.N03372 Erythranthe guttata HOM05D003774 ORTHO05D009174 7.3e-25 118.6 246 34.1
CSS0003364 Camellia sinensis var. sinensis HOM05D003774 ORTHO05D009174 9.5e-25 118.2 151 45.0
AT1G35420 Arabidopsis thaliana HOM05D003774 ORTHO05D009174 2.1e-24 117.1 244 33.2
SalBow6G0569 Salvia bowleyana HOM05D003774 ORTHO05D009174 2.1e-24 117.1 267 34.1
SalBow6G5656 Salvia bowleyana HOM05D003774 ORTHO05D009174 2.1e-24 117.1 267 34.1
AL1G50230 Arabidopsis lyrata HOM05D003774 ORTHO05D009174 6.8e-23 112.1 247 33.6
BcaB07g33408 Brassica carinata HOM05D003774 ORTHO05D009174 6.8e-23 112.1 253 32.4
Thhalv10001825m.g Eutrema salsugineum HOM05D003774 ORTHO05D009174 8.9e-23 111.7 270 31.9
BraA09t38720Z Brassica rapa HOM05D003774 ORTHO05D009174 2.6e-22 110.2 253 32.0
CSS0038100 Camellia sinensis var. sinensis HOM05D003774 ORTHO05D009174 5.7e-22 109.0 151 43.7
A09p31810 Brassica napus HOM05D003774 ORTHO05D009174 7.5e-22 108.6 310 31.0
Carub.0001s3302 Capsella rubella HOM05D003774 ORTHO05D009174 1.7e-21 107.5 268 31.0
BcaNung06721 Brassica carinata HOM05D003774 ORTHO05D009174 2.2e-21 107.1 248 32.3
SGA_v2.0_scaffold25G11034 Striga asiatica HOM05D003774 ORTHO05D009174 2.2e-21 107.1 234 34.2
BcaC08g43731 Brassica carinata HOM05D003774 ORTHO05D009174 8.3e-21 105.1 303 30.7
C06p11130 Brassica napus HOM05D003774 ORTHO05D009174 8.3e-21 105.1 303 30.7
BolC6t36236H Brassica oleracea HOM05D003774 ORTHO05D009174 8.3e-21 105.1 303 30.7
Sc09g0006790 Simmondsia chinensis HOM05D003774 ORTHO05D009174 1.4e-20 104.4 176 40.9
Glyma.04G256500 Glycine max HOM05D003774 ORTHO05D009174 5.6e-17 92.4 147 42.2
Cpa.g.sc66.2 Carica papaya HOM05D003774 ORTHO05D009174 1.6e-16 90.9 146 38.4
PGSC0003DMG401025647 Solanum tuberosum HOM05D003774 ORTHO05D009174 1.3e-13 81.3 158 33.5
Mapoly0002s0135 Marchantia polymorpha HOM05D003774 ORTHO05D009174 2.7e-11 73.6 233 24.9
SEGI_39255 Sequoiadendron giganteum HOM05D003774 ORTHO05D009174 2.7e-11 73.6 149 32.9
CDE08G1139 Ceratophyllum demersum HOM05D003774 ORTHO05D009174 4.6e-11 72.8 95 48.4
SEGI_30677 Sequoiadendron giganteum HOM05D003774 ORTHO05D009174 2.3e-10 70.5 69 55.1
SEGI_34335 Sequoiadendron giganteum HOM05D003774 ORTHO05D009174 2.3e-10 70.5 69 55.1
TAR636G2860 Trochodendron aralioides HOM05D003774 ORTHO05D009174 6.2e-08 62.4 33 75.8
FAN04G1660 Fragaria x ananassa HOM05D003774 ORTHO05D009174 1.4e-07 61.2 34 76.5
AagrBONN_evm.TU.Sc2ySwM_228.1693 Anthoceros agrestis HOM05D003774 ORTHO05D009174 1.8e-07 60.8 247 25.5


User provided reference genes

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