Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G102300 Populus trichocarpa HOM05D008742 ORTHO05D010377 3.8e-165 584.7 287 100.0
Sabra13G0088400 Salix brachista HOM05D008742 ORTHO05D010377 4.5e-134 481.5 344 74.7
Manes.18G121000 Manihot esculenta HOM05D008742 ORTHO05D010377 4.5e-73 278.9 294 54.1
TAR628G0950 Trochodendron aralioides HOM05D008742 ORTHO05D010377 3.0e-69 266.2 292 51.4
Cfa008115 Carpinus fangiana HOM05D008742 ORTHO05D010377 5.7e-68 261.9 279 54.8
QL10p026828 Quercus lobata HOM05D008742 ORTHO05D010377 2.2e-67 260.0 295 52.2
CiPaw.03G017300 Carya illinoinensis HOM05D008742 ORTHO05D010377 4.5e-65 252.3 288 50.3
CANSAT25G0509 Cannabis sativa HOM05D008742 ORTHO05D010377 3.0e-61 239.6 283 48.4
Gohir.D13G122200 Gossypium hirsutum HOM05D008742 ORTHO05D010377 3.9e-61 239.2 291 48.5
Ciclev10021221m.g Citrus clementina HOM05D008742 ORTHO05D010377 4.3e-60 235.7 328 46.0
Aqoxy6G00073 Aquilegia oxysepala HOM05D008742 ORTHO05D010377 9.7e-60 234.6 276 47.5
Gorai.013G136900 Gossypium raimondii HOM05D008742 ORTHO05D010377 1.4e-58 230.7 292 47.9
Gohir.A13G118401 Gossypium hirsutum HOM05D008742 ORTHO05D010377 1.0e-56 224.6 294 45.9
GSVIVG01025912001 Vitis vinifera HOM05D008742 ORTHO05D010377 1.0e-56 224.6 239 54.4
Solyc11g031970.2 Solanum lycopersicum HOM05D008742 ORTHO05D010377 2.3e-53 213.4 261 46.4
Thecc.08G171700 Theobroma cacao HOM05D008742 ORTHO05D010377 5.1e-53 212.2 292 45.5
Eucgr.F02959 Eucalyptus grandis HOM05D008742 ORTHO05D010377 1.5e-52 210.7 280 44.6
PGSC0003DMG400031182 Solanum tuberosum HOM05D008742 ORTHO05D010377 4.8e-51 205.7 262 46.6
PGR042G1068 Punica granatum HOM05D008742 ORTHO05D010377 1.1e-50 204.5 251 46.6
Nitab4.5_0001278g0110 Nicotiana tabacum HOM05D008742 ORTHO05D010377 1.4e-50 204.1 288 44.1
Nitab4.5_0001359g0010 Nicotiana tabacum HOM05D008742 ORTHO05D010377 2.4e-50 203.4 292 45.9
MSTRG.25490 Avicennia marina HOM05D008742 ORTHO05D010377 5.3e-50 202.2 244 48.0
Sopen11g014500 Solanum pennellii HOM05D008742 ORTHO05D010377 2.0e-49 200.3 262 45.0
MBI03_g14517_MAGBIO Magnolia biondii HOM05D008742 ORTHO05D010377 1.0e-45 188.0 292 41.4
PSO170G1705 Papaver somniferum HOM05D008742 ORTHO05D010377 2.6e-44 183.3 252 44.4
PSO782G1932 Papaver somniferum HOM05D008742 ORTHO05D010377 4.4e-44 182.6 250 45.2
Peaxi162Scf00688g00019 Petunia axillaris HOM05D008742 ORTHO05D010377 1.7e-43 180.6 289 40.8
SalBow7G3290 Salvia bowleyana HOM05D008742 ORTHO05D010377 5.3e-42 175.6 289 40.1
ClCG08G000630 Citrullus lanatus HOM05D008742 ORTHO05D010377 4.5e-41 172.6 247 42.9
MELO3C022199.2 Cucumis melo HOM05D008742 ORTHO05D010377 3.8e-40 169.5 292 39.0
ATR1136G217 Amborella trichopoda HOM05D008742 ORTHO05D010377 1.9e-39 167.2 232 44.4
CsaV3_5G040230 Cucumis sativus L. HOM05D008742 ORTHO05D010377 4.2e-39 166.0 295 40.7
Cc10_g16420 Coffea canephora HOM05D008742 ORTHO05D010377 1.2e-38 164.5 255 44.3
Cpa.g.sc21.53 Carica papaya HOM05D008742 ORTHO05D010377 7.5e-36 155.2 248 40.7
Migut.C01345 Erythranthe guttata HOM05D008742 ORTHO05D010377 1.1e-34 151.4 277 41.9
Dinv41793 Davidia involucrata HOM05D008742 ORTHO05D010377 2.4e-34 150.2 166 54.2
TWI59G0981 Tripterygium wilfordii HOM05D008742 ORTHO05D010377 4.1e-34 149.4 159 49.7
Haze_13917 Corylus avellana HOM05D008742 ORTHO05D010377 2.2e-27 127.1 116 61.2
THA.LOC104815909 Tarenaya hassleriana HOM05D012304 ORTHO05D010377 1.1e-26 124.8 261 31.0
Sed0018339 Sechium edule HOM05D008742 ORTHO05D010377 1.4e-21 107.8 264 29.9
Sp6g07500 Schrenkiella parvula HOM05D012304 ORTHO05D010377 2.4e-18 97.1 270 29.6
AL6G43670 Arabidopsis lyrata HOM05D012304 ORTHO05D010377 4.1e-18 96.3 242 30.2
Thhalv10028904m.g Eutrema salsugineum HOM05D012304 ORTHO05D010377 5.4e-18 95.9 238 31.1
Carub.0006s2851 Capsella rubella HOM05D012304 ORTHO05D010377 2.7e-17 93.6 238 29.8
CDE07G1611 Ceratophyllum demersum HOM05D008742 ORTHO05D010377 1.3e-16 91.3 248 31.0
AT4G09970 Arabidopsis thaliana HOM05D012304 ORTHO05D010377 3.9e-16 89.7 240 30.0
Duzib177G0721 Durio zibethinus HOM05D008742 ORTHO05D010377 7.3e-15 85.5 86 51.2
Aa31LG9G12020 Aethionema arabicum HOM05D012304 ORTHO05D010377 3.6e-14 83.2 239 27.6
SMO236G0128 Selaginella moellendorffii HOM05D008742 ORTHO05D010377 5.2e-13 79.3 234 29.9
Mapoly0060s0075 Marchantia polymorpha HOM05D020309 ORTHO05D010377 2.6e-12 77.0 305 24.6
BcaB05g23938 Brassica carinata HOM05D012304 ORTHO05D010377 6.4e-11 72.4 270 26.3
Duzib177G0864 Durio zibethinus HOM05D008742 ORTHO05D010377 6.4e-11 72.4 53 66.0
A02p26830 Brassica napus HOM05D012304 ORTHO05D010377 1.6e-09 67.8 117 36.8
BraA02t07692Z Brassica rapa HOM05D012304 ORTHO05D010377 1.6e-09 67.8 117 36.8
BolSC33t60634H Brassica oleracea HOM05D012304 ORTHO05D010377 6.0e-09 65.9 117 36.8
AagrBONN_evm.TU.Sc2ySwM_368.552 Anthoceros agrestis HOM05D020309 ORTHO05D010377 3.0e-08 63.5 225 24.9
CARHR260950 Cardamine hirsuta HOM05D012304 ORTHO05D010377 2.5e-07 60.5 117 35.9
SGA_v2.0_scaffold24G10618 Striga asiatica HOM05D000065 ORTHO05D000162 2.5e-07 60.5 109 39.4
Pp3c3_11780 Physcomitrium patens HOM05D020309 ORTHO05D010377 3.3e-07 60.1 274 23.0
BcaC03g16452 Brassica carinata HOM05D012304 ORTHO05D010377 1.2e-06 58.2 117 35.0
C02p42700 Brassica napus HOM05D012304 ORTHO05D010377 1.2e-06 58.2 117 35.0


User provided reference genes

Program Settings