Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G098625 Populus trichocarpa HOM05D000001 ORTHO05D331460 3.0e-44 181.4 88 100.0
Ciclev10023981m.g Citrus clementina HOM05D000001 ORTHO05D000424 2.4e-09 65.5 92 46.7
HanXRQChr02g0039241 Helianthus annuus HOM05D000001 ORTHO05D000424 1.0e-07 60.1 94 45.7
Migut.C01388 Erythranthe guttata HOM05D000001 ORTHO05D000424 1.3e-07 59.7 32 81.2
HanXRQChr02g0039211 Helianthus annuus HOM05D000001 ORTHO05D000424 1.7e-07 59.3 94 45.7
PGR042G0930 Punica granatum HOM05D000001 ORTHO05D000424 2.2e-07 58.9 90 41.1
EL10Ac1g00647 Beta vulgaris HOM05D000001 ORTHO05D000424 2.9e-07 58.5 44 54.5
CAN.G14.51 Capsicum annuum HOM05D000001 ORTHO05D000424 2.9e-07 58.5 33 78.8
Cfa008062 Carpinus fangiana HOM05D000001 ORTHO05D000424 2.9e-07 58.5 32 78.1
Haze_13963 Corylus avellana HOM05D000001 ORTHO05D000424 2.9e-07 58.5 32 78.1
Nitab4.5_0001430g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000424 2.9e-07 58.5 32 81.2
Nitab4.5_0014837g0010 Nicotiana tabacum HOM05D000001 ORTHO05D000424 2.9e-07 58.5 32 81.2
Peaxi162Scf00078g00839 Petunia axillaris HOM05D000001 ORTHO05D000424 2.9e-07 58.5 32 81.2
FAN15G1750 Fragaria x ananassa HOM05D000001 ORTHO05D000424 3.8e-07 58.2 40 62.5
FAN20G1674 Fragaria x ananassa HOM05D000001 ORTHO05D000424 3.8e-07 58.2 40 62.5
FAN27G0420 Fragaria x ananassa HOM05D000001 ORTHO05D000424 3.8e-07 58.2 40 62.5
SHI16840 Sapria himalayana HOM05D000001 ORTHO05D000424 3.8e-07 58.2 39 69.2
GSVIVG01037212001 Vitis vinifera HOM05D000001 ORTHO05D000424 3.8e-07 58.2 32 81.2
Peaxi162Scf00818g00045 Petunia axillaris HOM05D000001 ORTHO05D000424 5.0e-07 57.8 32 81.2
PGR042G0075 Punica granatum HOM05D000001 ORTHO05D000424 5.0e-07 57.8 32 78.1
HanXRQChr09g0266831 Helianthus annuus HOM05D000001 ORTHO05D000424 6.5e-07 57.4 90 41.1
Oeu035046.1 Olea europaea HOM05D000001 ORTHO05D000424 6.5e-07 57.4 32 78.1
SalBow7G1874 Salvia bowleyana HOM05D000001 ORTHO05D000424 6.5e-07 57.4 32 78.1
SGA_v2.0_scaffold118G32623 Striga asiatica HOM05D000001 ORTHO05D000424 6.5e-07 57.4 32 78.1
GSVIVG01037214001 Vitis vinifera HOM05D000001 ORTHO05D000424 6.5e-07 57.4 32 75.0
HanXRQChr02g0039191 Helianthus annuus HOM05D000001 ORTHO05D000424 8.5e-07 57.0 99 41.4
Lj3g0009658 Lotus japonicus HOM05D000001 ORTHO05D000424 8.5e-07 57.0 33 72.7
Peaxi162Scf00818g00048 Petunia axillaris HOM05D000001 ORTHO05D000424 8.5e-07 57.0 32 75.0
QL09p001725 Quercus lobata HOM05D000001 ORTHO05D000424 8.5e-07 57.0 92 40.2
ATR1089G147 Amborella trichopoda HOM05D000001 ORTHO05D000424 1.1e-06 56.6 32 75.0
Eucgr.F02943 Eucalyptus grandis HOM05D000001 ORTHO05D000424 1.1e-06 56.6 32 71.9
HanXRQChr09g0266841 Helianthus annuus HOM05D000001 ORTHO05D000424 1.1e-06 56.6 32 75.0
Lsat_1_v5_gn_0_36661 Lactuca sativa HOM05D000001 ORTHO05D000424 1.1e-06 56.6 33 72.7
Lsat_1_v5_gn_4_132521 Lactuca sativa HOM05D000001 ORTHO05D000424 1.1e-06 56.6 33 72.7
Lsat_1_v5_gn_4_132541 Lactuca sativa HOM05D000001 ORTHO05D000424 1.1e-06 56.6 33 72.7
Nitab4.5_0007725g0020 Nicotiana tabacum HOM05D000001 ORTHO05D000424 1.1e-06 56.6 32 78.1
Rhsim02G0172500 Rhododendron simsii HOM05D000001 ORTHO05D000424 1.1e-06 56.6 32 78.1
Actinidia29378 Actinidia chinensis HOM05D000001 ORTHO05D000424 1.4e-06 56.2 32 78.1
CAN.G14.52 Capsicum annuum HOM05D000001 ORTHO05D000424 1.4e-06 56.2 33 75.8
Cpa.g.sc21.96 Carica papaya HOM05D000001 ORTHO05D000424 1.4e-06 56.2 32 75.0
ClCG08G000790 Citrullus lanatus HOM05D000001 ORTHO05D000424 1.4e-06 56.2 32 78.1
Dinv22116 Davidia involucrata HOM05D000001 ORTHO05D000424 1.4e-06 56.2 32 75.0
FvH4_2g39510 Fragaria vesca HOM05D000001 ORTHO05D000424 1.4e-06 56.2 34 67.6
Glyma.09G224500 Glycine max HOM05D000001 ORTHO05D000424 1.4e-06 56.2 92 39.1
Lsat_1_v5_gn_4_132740 Lactuca sativa HOM05D000001 ORTHO05D000424 1.4e-06 56.2 32 78.1
PSO447G0336 Papaver somniferum HOM05D000001 ORTHO05D000424 1.4e-06 56.2 91 41.8
Phvul.002G033500 Phaseolus vulgaris HOM05D000001 ORTHO05D000424 1.4e-06 56.2 40 62.5
Solyc06g064520.4 Solanum lycopersicum HOM05D000001 ORTHO05D000424 1.4e-06 56.2 32 75.0
TAR628G0845 Trochodendron aralioides HOM05D000001 ORTHO05D000424 1.4e-06 56.2 32 75.0
GSVIVG01037213001 Vitis vinifera HOM05D000001 ORTHO05D000424 1.4e-06 56.2 88 43.2
CAN.G14.50 Capsicum annuum HOM05D000001 ORTHO05D000424 1.9e-06 55.8 33 75.8
Glyma.11G071300 Glycine max HOM05D000001 ORTHO05D000424 1.9e-06 55.8 44 54.5
Lalb_Chr09g0322181 Lupinus albus HOM05D000001 ORTHO05D000424 1.9e-06 55.8 40 62.5
Medtr3g112060 Medicago truncatula HOM05D000001 ORTHO05D000424 1.9e-06 55.8 33 69.7
Nitab4.5_0016366g0010 Nicotiana tabacum HOM05D000001 ORTHO05D000424 1.9e-06 55.8 32 71.9
Sopen06g022990 Solanum pennellii HOM05D000001 ORTHO05D000424 1.9e-06 55.8 32 71.9
arahy.Tifrunner.gnm1.ann1.E6ZLZ7 Arachis hypogaea HOM05D000001 ORTHO05D000424 2.5e-06 55.5 44 56.8
Lalb_Chr05g0212651 Lupinus albus HOM05D000001 ORTHO05D000424 2.5e-06 55.5 40 62.5
Nitab4.5_0003200g0100 Nicotiana tabacum HOM05D000001 ORTHO05D000424 2.5e-06 55.5 33 75.8
Potri.019G070200 Populus trichocarpa HOM05D000001 ORTHO05D000424 2.5e-06 55.5 32 81.2
QL02p009119 Quercus lobata HOM05D000001 ORTHO05D000424 2.5e-06 55.5 33 69.7
TAR362G0478 Trochodendron aralioides HOM05D000001 ORTHO05D000424 2.5e-06 55.5 33 72.7
TAR376G1098 Trochodendron aralioides HOM05D000001 ORTHO05D000424 2.5e-06 55.5 92 41.3
VMungo1215G2728 Vigna mungo HOM05D000001 ORTHO05D000424 2.5e-06 55.5 40 62.5
Cc10_g16330 Coffea canephora HOM05D000001 ORTHO05D000424 3.2e-06 55.1 32 71.9
MELO3C022162.2 Cucumis melo HOM05D000001 ORTHO05D000424 3.2e-06 55.1 32 78.1
CsaV3_5G039820 Cucumis sativus L. HOM05D000001 ORTHO05D000424 3.2e-06 55.1 32 78.1
Glyma.01G171900 Glycine max HOM05D000001 ORTHO05D000424 3.2e-06 55.1 40 60.0
Lj7C418T4 Lonicera japonica HOM05D000001 ORTHO05D000424 3.2e-06 55.1 92 39.1
RcHm_v2.0_Chr6g0301441 Rosa chinensis HOM05D000001 ORTHO05D000424 3.2e-06 55.1 34 64.7
Hund13997 Selenicereus undatus HOM05D000001 ORTHO05D000424 3.2e-06 55.1 34 64.7
Solyc06g064537.1 Solanum lycopersicum HOM05D000001 ORTHO05D000424 3.2e-06 55.1 31 77.4
Solyc06g150126.1 Solanum lycopersicum HOM05D000001 ORTHO05D000424 3.2e-06 55.1 31 77.4
Sopen06g023000 Solanum pennellii HOM05D000001 ORTHO05D000424 3.2e-06 55.1 31 77.4
Sopen06g023020 Solanum pennellii HOM05D000001 ORTHO05D000424 3.2e-06 55.1 31 77.4
GSVIVG01037216001 Vitis vinifera HOM05D000001 ORTHO05D000424 3.2e-06 55.1 32 75.0
CiPaw.03G013600 Carya illinoinensis HOM05D000001 ORTHO05D000424 4.2e-06 54.7 32 75.0
Medtr1g085430 Medicago truncatula HOM05D000001 ORTHO05D000424 4.2e-06 54.7 33 69.7
Nitab4.5_0000428g0080 Nicotiana tabacum HOM05D000001 ORTHO05D000424 4.2e-06 54.7 38 65.8
SGA_v2.0_scaffold201G41396 Striga asiatica HOM05D000001 ORTHO05D000424 4.2e-06 54.7 40 65.0
TPR.G2367 Trifolium pratense HOM05D000001 ORTHO05D000424 4.2e-06 54.7 44 54.5
GSVIVG01037211001 Vitis vinifera HOM05D000001 ORTHO05D000424 4.2e-06 54.7 92 40.2
Atru.chr3.627 Acer truncatum HOM05D000001 ORTHO05D000424 5.5e-06 54.3 33 69.7
arahy.Tifrunner.gnm1.ann1.T9U53V Arachis hypogaea HOM05D000001 ORTHO05D000424 5.5e-06 54.3 44 54.5
CAN.G14.49 Capsicum annuum HOM05D000001 ORTHO05D000424 5.5e-06 54.3 32 68.8
Ciclev10025631m.g Citrus clementina HOM05D000001 ORTHO05D000424 5.5e-06 54.3 33 69.7
Cc10_g02600 Coffea canephora HOM05D000001 ORTHO05D000424 5.5e-06 54.3 33 72.7
GSVIVG01018923001 Vitis vinifera HOM05D000001 ORTHO05D000424 5.5e-06 54.3 40 57.5
GSVIVG01037215001 Vitis vinifera HOM05D000001 ORTHO05D000424 5.5e-06 54.3 32 75.0
Cpa.g.sc6.153 Carica papaya HOM05D000001 ORTHO05D000424 7.2e-06 53.9 34 61.8
Cfa004339 Carpinus fangiana HOM05D000001 ORTHO05D000424 7.2e-06 53.9 34 64.7
Ciclev10001262m.g Citrus clementina HOM05D000001 ORTHO05D000424 7.2e-06 53.9 33 66.7
Cc01_g03410 Coffea canephora HOM05D000001 ORTHO05D000424 7.2e-06 53.9 33 72.7
Cc07_g09850 Coffea canephora HOM05D000001 ORTHO05D000424 7.2e-06 53.9 34 61.8
DCAR_013833 Daucus carota HOM05D000001 ORTHO05D000424 7.2e-06 53.9 32 71.9
Migut.C01387 Erythranthe guttata HOM05D000001 ORTHO05D000424 7.2e-06 53.9 32 71.9
MBI03_g29108_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000424 7.2e-06 53.9 32 75.0
MD02G1143700 Malus domestica HOM05D000001 ORTHO05D000424 7.2e-06 53.9 33 69.7
Medtr1g085320 Medicago truncatula HOM05D000001 ORTHO05D000424 7.2e-06 53.9 39 61.5
Medtr5g020890 Medicago truncatula HOM05D000001 ORTHO05D000424 7.2e-06 53.9 40 60.0
Nn1g04924 Nelumbo nucifera HOM05D000001 ORTHO05D000424 7.2e-06 53.9 33 66.7
Prupe.7G158000 Prunus persica HOM05D000001 ORTHO05D000424 7.2e-06 53.9 33 69.7
QL06p047114 Quercus lobata HOM05D000001 ORTHO05D000424 7.2e-06 53.9 34 64.7
Sed0015781 Sechium edule HOM05D000001 ORTHO05D000424 7.2e-06 53.9 34 64.7
THA.LOC104821301 Tarenaya hassleriana HOM05D000001 ORTHO05D000424 7.2e-06 53.9 33 69.7
TAR376G1121 Trochodendron aralioides HOM05D000001 ORTHO05D000424 7.2e-06 53.9 33 69.7
vmacro17812 Vaccinium macrocarpon HOM05D000001 ORTHO05D000424 7.2e-06 53.9 33 66.7
Actinidia15349 Actinidia chinensis HOM05D000001 ORTHO05D000424 9.4e-06 53.5 34 64.7
COL.COLO4_26274 Corchorus olitorius HOM05D000001 ORTHO05D000424 9.4e-06 53.5 34 61.8
DCAR_009969 Daucus carota HOM05D000001 ORTHO05D000424 9.4e-06 53.5 32 75.0
Dinv39441 Davidia involucrata HOM05D000001 ORTHO05D000424 9.4e-06 53.5 33 69.7
Glyma.12G012500 Glycine max HOM05D000001 ORTHO05D000424 9.4e-06 53.5 92 37.0
Lsat_1_v5_gn_5_157381 Lactuca sativa HOM05D000001 ORTHO05D000424 9.4e-06 53.5 40 62.5
Manes.18G019525 Manihot esculenta HOM05D000001 ORTHO05D000424 9.4e-06 53.5 34 61.8
Medtr4g043760 Medicago truncatula HOM05D000001 ORTHO05D000424 9.4e-06 53.5 91 37.4
Nn5g29668 Nelumbo nucifera HOM05D000001 ORTHO05D000424 9.4e-06 53.5 33 66.7
Oeu063613.2 Olea europaea HOM05D000001 ORTHO05D000424 9.4e-06 53.5 33 69.7
Peaxi162Scf00268g01015 Petunia axillaris HOM05D000001 ORTHO05D000424 9.4e-06 53.5 39 61.5
Rhsim06G0030300 Rhododendron simsii HOM05D000001 ORTHO05D000424 9.4e-06 53.5 34 64.7
TAR628G0186 Trochodendron aralioides HOM05D000001 ORTHO05D000424 9.4e-06 53.5 33 66.7
Zm00001eb157610 Zea mays HOM05D000001 ORTHO05D000424 9.4e-06 53.5 34 64.7


User provided reference genes

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