Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G092100 Populus trichocarpa HOM05D003132 ORTHO05D003736 2.6e-77 292.0 147 100.0
Sabra19G0078500 Salix brachista HOM05D003132 ORTHO05D003736 5.7e-32 141.4 97 76.3
Potri.019G066200 Populus trichocarpa HOM05D003132 ORTHO05D003736 3.7e-31 138.7 97 76.3
TAR628G0652 Trochodendron aralioides HOM05D003132 ORTHO05D003736 2.2e-23 112.8 105 58.1
Manes.18G119900 Manihot esculenta HOM05D003132 ORTHO05D003736 1.8e-22 109.8 106 58.5
Duzib177G0974 Durio zibethinus HOM05D003132 ORTHO05D003736 5.4e-22 108.2 105 59.0
COL.COLO4_25069 Corchorus olitorius HOM05D003132 ORTHO05D003736 7.7e-21 104.4 114 56.1
QL09p001110 Quercus lobata HOM05D003132 ORTHO05D003736 1.0e-20 104.0 101 58.4
Cfa021494 Carpinus fangiana HOM05D003132 ORTHO05D003736 2.9e-20 102.4 144 45.8
Haze_14017 Corylus avellana HOM05D003132 ORTHO05D003736 6.6e-20 101.3 108 53.7
CiPaw.03G011700 Carya illinoinensis HOM05D003132 ORTHO05D003736 8.6e-20 100.9 99 56.6
Prupe.8G002200 Prunus persica HOM05D003132 ORTHO05D003736 8.6e-20 100.9 106 54.7
Gohir.A08G230900 Gossypium hirsutum HOM05D003132 ORTHO05D003736 1.5e-19 100.1 106 57.5
Gohir.D08G251300 Gossypium hirsutum HOM05D003132 ORTHO05D003736 2.5e-19 99.4 106 56.6
FAN19G2774 Fragaria x ananassa HOM05D003132 ORTHO05D003736 3.3e-19 99.0 106 56.6
Gorai.004G268000 Gossypium raimondii HOM05D003132 ORTHO05D003736 3.3e-19 99.0 106 57.5
MD10G1001000 Malus domestica HOM05D003132 ORTHO05D003736 3.3e-19 99.0 109 54.1
FvH4_2g00230 Fragaria vesca HOM05D003132 ORTHO05D003736 7.2e-19 97.8 106 55.7
FAN24G0668 Fragaria x ananassa HOM05D003132 ORTHO05D003736 7.2e-19 97.8 106 55.7
Eucgr.F04096 Eucalyptus grandis HOM05D003132 ORTHO05D003736 1.2e-18 97.1 106 52.8
RcHm_v2.0_Chr6g0249521 Rosa chinensis HOM05D003132 ORTHO05D003736 2.1e-18 96.3 106 55.7
TWI12G0091 Tripterygium wilfordii HOM05D003132 ORTHO05D003736 3.6e-18 95.5 102 53.9
Nn5g27185 Nelumbo nucifera HOM05D003132 ORTHO05D003736 1.4e-17 93.6 100 49.0
Dinv22067 Davidia involucrata HOM05D003132 ORTHO05D003736 3.0e-17 92.4 132 46.2
Phvul.005G006600 Phaseolus vulgaris HOM05D003132 ORTHO05D003736 2.0e-16 89.7 112 45.5
Glyma.04G116900 Glycine max HOM05D003132 ORTHO05D003736 2.2e-15 86.3 109 45.9
VMungo1080G0294 Vigna mungo HOM05D003132 ORTHO05D003736 2.8e-15 85.9 112 47.3
Rhsim12G0001000 Rhododendron simsii HOM05D003132 ORTHO05D003736 3.7e-15 85.5 132 40.2
vmacro00917 Vaccinium macrocarpon HOM05D003132 ORTHO05D003736 1.4e-14 83.6 131 38.2
Actinidia01536 Actinidia chinensis HOM05D003132 ORTHO05D003736 2.4e-14 82.8 137 42.3
Hma1.2p1_0378F.1_g139670 Hydrangea macrophylla HOM05D003132 ORTHO05D003736 2.4e-14 82.8 123 48.0
PGR102G0292 Punica granatum HOM05D003132 ORTHO05D003736 2.4e-14 82.8 122 45.1
arahy.Tifrunner.gnm1.ann1.F59MVU Arachis hypogaea HOM05D003132 ORTHO05D003736 4.1e-14 82.0 103 48.5
arahy.Tifrunner.gnm1.ann1.M3HMN7 Arachis hypogaea HOM05D003132 ORTHO05D003736 7.0e-14 81.3 103 48.5
Lj3g0025144 Lotus japonicus HOM05D003132 ORTHO05D003736 7.0e-14 81.3 109 45.9
Medtr3g009180 Medicago truncatula HOM05D003132 ORTHO05D003736 1.0e-12 77.4 111 42.3
Atru.chr13.2600 Acer truncatum HOM05D003132 ORTHO05D003736 2.3e-12 76.3 64 64.1
Lj9C693G4 Lonicera japonica HOM05D003132 ORTHO05D003736 2.3e-12 76.3 138 39.9
Ca_14120_v3 Cicer arietinum L. HOM05D003132 ORTHO05D003736 2.9e-12 75.9 107 43.9
Ciclev10020271m.g Citrus clementina HOM05D003132 ORTHO05D003736 6.6e-12 74.7 142 35.9
ATR1089G070 Amborella trichopoda HOM05D003132 ORTHO05D003736 1.1e-11 73.9 100 50.0
Cpa.g.sc249.17 Carica papaya HOM05D003132 ORTHO05D003736 1.5e-11 73.6 129 38.0
TPR.G16695 Trifolium pratense HOM05D003132 ORTHO05D003736 3.3e-11 72.4 111 39.6
MBI03_g39997_MAGBIO Magnolia biondii HOM05D003132 ORTHO05D003736 4.3e-11 72.0 100 45.0
GSVIVG01037119001 Vitis vinifera HOM05D003132 ORTHO05D003736 6.8e-09 64.7 79 48.1
CSS0047902 Camellia sinensis var. sinensis HOM05D003132 ORTHO05D003736 1.5e-08 63.5 170 34.1
ECA246G0273 Erigeron canadensis HOM05D003132 ORTHO05D003736 9.8e-08 60.8 118 31.4
Psat5g230840 Pisum sativum HOM05D003132 ORTHO05D003736 9.8e-08 60.8 47 61.7
CARHR204070 Cardamine hirsuta HOM05D003132 ORTHO05D003736 1.3e-07 60.5 119 36.1
Zm00001eb064020 Zea mays HOM05D003132 ORTHO05D003736 2.9e-07 59.3 96 37.5
AL3G33220 Arabidopsis lyrata HOM05D003132 ORTHO05D003736 3.7e-07 58.9 63 50.8
AT3G19770 Arabidopsis thaliana HOM05D003132 ORTHO05D003736 3.7e-07 58.9 63 49.2
Thhalv10020497m.g Eutrema salsugineum HOM05D003132 ORTHO05D003736 3.7e-07 58.9 63 49.2
SGA_v2.0_scaffold118G32441 Striga asiatica HOM05D003132 ORTHO05D003736 6.4e-07 58.2 108 33.3
Lj7C306G6 Lonicera japonica HOM05D000316 ORTHO05D000374 8.3e-07 57.8 141 28.4
Carub.0003s1964 Capsella rubella HOM05D003132 ORTHO05D003736 3.2e-06 55.8 63 46.0
RcHm_v2.0_Chr7g0240821 Rosa chinensis HOM05D003132 ORTHO05D003736 3.2e-06 55.8 127 33.1
Gohir.D06G041500 Gossypium hirsutum HOM05D003132 ORTHO05D003736 7.0e-06 54.7 153 30.1


User provided reference genes

Program Settings