Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 1.4e-170 602.8 307 100.0
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 6.5e-155 550.8 308 90.9
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 3.7e-126 455.3 312 76.3
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 3.2e-125 452.2 307 75.6
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 9.5e-122 440.7 309 73.8
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 2.3e-120 436.0 305 73.4
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 4.4e-119 431.8 307 74.3
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.7e-118 429.9 312 70.5
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 8.3e-118 427.6 306 70.9
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 9.2e-117 424.1 311 70.7
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 3.9e-115 418.7 311 71.4
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 3.9e-115 418.7 307 71.3
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 6.6e-115 417.9 305 71.1
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 1.5e-114 416.8 337 65.3
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 3.3e-114 415.6 274 76.6
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 4.0e-112 408.7 312 70.2
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 5.2e-112 408.3 312 67.6
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 4.4e-111 405.2 273 73.6
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 1.9e-109 399.8 260 77.3
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 2.4e-109 399.4 308 65.9
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 3.2e-109 399.1 313 69.0
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 7.1e-109 397.9 305 67.9
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 7.1e-109 397.9 319 67.7
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 9.2e-109 397.5 321 66.0
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 9.2e-109 397.5 306 70.6
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 2.1e-108 396.4 262 73.7
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 6.0e-108 394.8 266 73.3
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 1.3e-107 393.7 301 69.4
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 1.7e-107 393.3 257 77.0
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 3.9e-107 392.1 235 81.7
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 5.1e-107 391.7 302 68.5
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 1.1e-106 390.6 257 76.3
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.5e-106 390.2 259 73.4
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 1.9e-106 389.8 277 70.4
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 7.3e-106 387.9 277 70.0
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 9.6e-106 387.5 243 77.0
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 1.2e-105 387.1 257 74.3
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 2.1e-105 386.3 263 73.4
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 2.1e-105 386.3 260 75.8
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 3.6e-105 385.6 280 70.7
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 4.7e-105 385.2 266 70.7
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 6.2e-105 384.8 308 64.9
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.4e-104 383.6 272 69.5
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 2.4e-104 382.9 323 65.0
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 3.1e-104 382.5 309 65.4
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 4.0e-104 382.1 267 69.3
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 4.0e-104 382.1 302 67.5
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 5.2e-104 381.7 317 66.2
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 5.2e-104 381.7 304 68.4
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 6.8e-104 381.3 266 69.9
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 2.6e-103 379.4 232 78.9
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 3.4e-103 379.0 320 64.1
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 3.4e-103 379.0 266 69.9
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 5.8e-103 378.3 278 71.2
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 7.6e-103 377.9 273 68.1
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 1.3e-102 377.1 306 64.1
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 2.2e-102 376.3 276 68.1
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 1.4e-101 373.6 300 65.3
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 1.9e-101 373.2 248 74.6
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 1.9e-101 373.2 227 80.2
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 7.1e-101 371.3 285 66.3
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 9.3e-101 370.9 300 63.3
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 2.1e-100 369.8 251 75.3
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 6.0e-100 368.2 261 69.3
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 6.0e-100 368.2 277 68.2
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 1.0e-99 367.5 267 70.4
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 1.5e-98 363.6 315 63.2
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 1.9e-98 363.2 294 63.3
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 3.3e-98 362.5 302 63.9
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 1.4e-96 357.1 318 59.7
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 1.8e-96 356.7 269 68.0
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 1.8e-96 356.7 256 69.5
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 9.0e-96 354.4 266 66.2
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 9.0e-96 354.4 256 68.8
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 1.2e-95 354.0 253 69.6
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 1.5e-95 353.6 267 66.7
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 2.0e-95 353.2 224 75.4
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 5.8e-95 351.7 272 65.8
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 7.6e-95 351.3 310 62.6
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 9.9e-95 350.9 239 71.1
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 1.3e-94 350.5 315 63.2
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.2e-93 345.5 251 68.5
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 9.3e-93 344.4 246 69.5
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 9.3e-93 344.4 267 64.8
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 2.1e-92 343.2 256 66.0
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 2.7e-92 342.8 255 66.7
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 1.0e-91 340.9 255 65.9
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 1.0e-91 340.9 261 65.5
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 1.0e-91 340.9 255 65.9
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.7e-91 340.1 246 69.1
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 2.3e-91 339.7 256 65.2
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 4.8e-89 332.0 314 58.6
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 6.2e-89 331.6 304 59.2
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 6.9e-88 328.2 225 71.1
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 1.5e-87 327.0 304 61.8
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 7.6e-87 324.7 259 65.6
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 1.3e-83 313.9 244 64.8
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 8.1e-81 304.7 217 70.5
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 2.4e-80 303.1 290 57.9
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 2.0e-79 300.1 261 59.4
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 2.8e-73 279.6 249 55.0
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 2.6e-71 273.1 275 56.0
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 1.3e-70 270.8 229 61.6
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 2.2e-70 270.0 260 55.0
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 1.5e-66 257.3 253 52.6
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 4.2e-61 239.2 239 52.3
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 2.6e-58 229.9 280 46.1
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 4.4e-58 229.2 148 77.7
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 5.9e-55 218.8 196 57.1
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 2.2e-49 200.3 239 47.7
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 1.5e-26 124.4 221 37.1
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 6.3e-25 119.0 122 54.9
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 5.0e-22 109.4 135 47.4
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 1.5e-13 81.3 64 56.2
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 1.5e-13 81.3 64 56.2
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 4.3e-13 79.7 249 27.3
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 3.7e-09 66.6 230 28.7


User provided reference genes

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