Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G070350 Populus trichocarpa HOM05D013415 ORTHO05D012618 7.3e-53 210.3 107 100.0
Manes.08G156100 Manihot esculenta HOM05D013415 ORTHO05D012618 3.2e-24 115.2 107 58.9
Gohir.D08G238000 Gossypium hirsutum HOM05D013415 ORTHO05D012618 7.6e-18 94.0 111 49.5
Thecc.05G235400 Theobroma cacao HOM05D013415 ORTHO05D012618 3.2e-16 88.6 107 45.8
Gohir.A08G221400 Gossypium hirsutum HOM05D013415 ORTHO05D012618 6.0e-15 84.3 111 45.9
Gorai.004G253500 Gossypium raimondii HOM05D013415 ORTHO05D012618 2.6e-10 68.9 97 46.4
Nn1g02117 Nelumbo nucifera HOM05D013415 ORTHO05D012618 5.8e-10 67.8 104 43.3
Medtr8g010450 Medicago truncatula HOM05D014336 ORTHO05D012618 1.3e-09 66.6 110 38.2
Medtr8g010400 Medicago truncatula HOM05D014336 ORTHO05D012618 4.9e-09 64.7 110 38.2
QL04p053448 Quercus lobata HOM05D013415 ORTHO05D012618 4.9e-09 64.7 109 38.5
CsaV3_3G009880 Cucumis sativus L. HOM05D013415 ORTHO05D012618 6.5e-09 64.3 107 42.1
Prupe.2G107100 Prunus persica HOM05D013415 ORTHO05D012618 1.9e-08 62.8 110 41.8
TPR.G9779 Trifolium pratense HOM05D014336 ORTHO05D012618 7.1e-08 60.8 109 38.5
Glyma.03G094100 Glycine max HOM05D014336 ORTHO05D012618 1.8e-06 56.2 111 36.9
A03p48400 Brassica napus HOM05D020704 ORTHO05D021633 2.3e-06 55.8 105 38.1
BraA03t13947Z Brassica rapa HOM05D020704 ORTHO05D021633 2.3e-06 55.8 105 38.1
Carub.0005s1801 Capsella rubella HOM05D020704 ORTHO05D021633 5.1e-06 54.7 105 39.0
Glyma.16G080000 Glycine max HOM05D014336 ORTHO05D012618 5.1e-06 54.7 114 35.1
Manes.09G133800 Manihot esculenta HOM05D013415 ORTHO05D249674 6.7e-06 54.3 100 40.0
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 8.7e-06 53.9 93 37.6


User provided reference genes

Program Settings