Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G060332 Populus trichocarpa HOM05D000211 ORTHO05D002682 2.4e-116 422.2 208 100.0
Sabra13G0053500 Salix brachista HOM05D000211 ORTHO05D002682 3.7e-93 345.1 187 89.8
Duzib106G1428 Durio zibethinus HOM05D000211 ORTHO05D002682 8.0e-72 274.2 199 68.3
COL.COLO4_36028 Corchorus olitorius HOM05D000211 ORTHO05D002682 2.6e-70 269.2 188 70.2
Thecc.05G254600 Theobroma cacao HOM05D000211 ORTHO05D002682 3.4e-70 268.9 191 68.1
PSO339G3993 Papaver somniferum HOM05D000211 ORTHO05D002682 9.8e-70 267.3 188 68.6
GSVIVG01025503001 Vitis vinifera HOM05D000211 ORTHO05D002682 6.3e-69 264.6 188 66.5
Atru.chr3.2061 Acer truncatum HOM05D000211 ORTHO05D002682 8.3e-69 264.2 188 66.0
Aqoxy6G00336 Aquilegia oxysepala HOM05D000211 ORTHO05D002682 1.1e-68 263.8 188 67.0
Manes.16G035100 Manihot esculenta HOM05D000211 ORTHO05D002682 1.1e-68 263.8 188 66.5
PSO384G4567 Papaver somniferum HOM05D000211 ORTHO05D002682 1.8e-68 263.1 188 67.6
Gohir.A13G101215 Gossypium hirsutum HOM05D000211 ORTHO05D002682 5.4e-68 261.5 188 66.5
Dinv13488 Davidia involucrata HOM05D000211 ORTHO05D002682 7.0e-68 261.2 188 66.5
MBI13_g37424_MAGBIO Magnolia biondii HOM05D000211 ORTHO05D002682 1.2e-67 260.4 188 66.5
COL.COLO4_35073 Corchorus olitorius HOM05D000211 ORTHO05D002682 2.0e-67 259.6 188 65.4
TWI60G0518 Tripterygium wilfordii HOM05D000211 ORTHO05D002682 5.9e-67 258.1 188 64.9
Oeu060906.1 Olea europaea HOM05D000211 ORTHO05D002682 7.7e-67 257.7 188 65.4
AUR62022805 Chenopodium quinoa HOM05D000211 ORTHO05D002682 1.3e-66 256.9 188 66.5
Peaxi162Scf00745g00321 Petunia axillaris HOM05D000211 ORTHO05D002682 1.7e-66 256.5 188 63.8
Glyma.07G224600 Glycine max HOM05D000211 ORTHO05D002682 2.9e-66 255.8 188 63.8
Ah.16g102820 Amaranthus hybridus HOM05D000211 ORTHO05D002682 3.8e-66 255.4 188 66.0
Gohir.A08G014300 Gossypium hirsutum HOM05D000211 ORTHO05D002682 3.8e-66 255.4 188 64.4
THA.LOC104811714 Tarenaya hassleriana HOM05D000211 ORTHO05D002682 3.8e-66 255.4 188 64.4
Cfa009535 Carpinus fangiana HOM05D000211 ORTHO05D002682 5.0e-66 255.0 188 64.9
Phvul.002G101100 Phaseolus vulgaris HOM05D000211 ORTHO05D002682 5.0e-66 255.0 188 63.3
AUR62012168 Chenopodium quinoa HOM05D000211 ORTHO05D002682 6.6e-66 254.6 188 66.0
Ciclev10014526m.g Citrus clementina HOM05D000211 ORTHO05D002682 6.6e-66 254.6 188 64.4
PGR102G3379 Punica granatum HOM05D000211 ORTHO05D002682 6.6e-66 254.6 190 65.8
Hund16025 Selenicereus undatus HOM05D000211 ORTHO05D002682 6.6e-66 254.6 188 66.5
Gorai.004G020200 Gossypium raimondii HOM05D000211 ORTHO05D002682 8.6e-66 254.2 188 64.4
TWI34G0611 Tripterygium wilfordii HOM05D000211 ORTHO05D002682 8.6e-66 254.2 188 65.4
CiPaw.13G179000 Carya illinoinensis HOM05D000211 ORTHO05D002682 1.1e-65 253.8 188 62.8
Glyma.20G024500 Glycine max HOM05D000211 ORTHO05D002682 1.1e-65 253.8 188 63.3
CANSAT11G1344 Cannabis sativa HOM05D000211 ORTHO05D002682 1.5e-65 253.4 188 62.8
Gohir.D08G024800 Gossypium hirsutum HOM05D000211 ORTHO05D002682 1.5e-65 253.4 188 64.4
HPP92_014369 Vanilla planifolia HOM05D000211 ORTHO05D002682 1.9e-65 253.1 188 64.4
Lalb_Chr05g0219841 Lupinus albus HOM05D000211 ORTHO05D002682 2.5e-65 252.7 188 62.8
Thecc.09G197900 Theobroma cacao HOM05D000211 ORTHO05D002682 2.5e-65 252.7 188 63.8
MSTRG.12804 Avicennia marina HOM05D000211 ORTHO05D002682 4.2e-65 251.9 189 64.0
vmacro04275 Vaccinium macrocarpon HOM05D000211 ORTHO05D002682 4.2e-65 251.9 198 60.6
Potri.003G223000 Populus trichocarpa HOM05D000211 ORTHO05D002682 5.5e-65 251.5 188 63.8
QL01p007953 Quercus lobata HOM05D000211 ORTHO05D002682 5.5e-65 251.5 187 63.6
Gorai.013G245500 Gossypium raimondii HOM05D000211 ORTHO05D002682 7.2e-65 251.1 188 64.9
Os01g0276800 Oryza sativa ssp. japonica HOM05D000211 ORTHO05D002682 7.2e-65 251.1 188 63.8
arahy.Tifrunner.gnm1.ann1.NBIC4D Arachis hypogaea HOM05D000211 ORTHO05D002682 9.5e-65 250.8 191 61.3
CARHR269800 Cardamine hirsuta HOM05D000211 ORTHO05D002682 9.5e-65 250.8 189 62.4
Gohir.D13G215200 Gossypium hirsutum HOM05D000211 ORTHO05D002682 9.5e-65 250.8 188 64.4
Nn4g24948 Nelumbo nucifera HOM05D000211 ORTHO05D002682 9.5e-65 250.8 196 62.2
AL8G32010 Arabidopsis lyrata HOM05D000211 ORTHO05D002682 1.2e-64 250.4 189 61.9
Eucgr.B03587 Eucalyptus grandis HOM05D000211 ORTHO05D002682 1.2e-64 250.4 188 62.2
Lalb_Chr16g0385411 Lupinus albus HOM05D000211 ORTHO05D002682 1.2e-64 250.4 188 63.8
Sabra03G0165900 Salix brachista HOM05D000211 ORTHO05D002682 1.2e-64 250.4 188 63.3
SalBow3G3948 Salvia bowleyana HOM05D000211 ORTHO05D002682 1.2e-64 250.4 188 61.7
TPR.G34020 Trifolium pratense HOM05D000211 ORTHO05D002682 1.2e-64 250.4 188 61.7
arahy.Tifrunner.gnm1.ann1.GBZS02 Arachis hypogaea HOM05D000211 ORTHO05D002682 1.6e-64 250.0 191 61.3
Manes.17G052400 Manihot esculenta HOM05D000211 ORTHO05D002682 1.6e-64 250.0 188 64.4
BcaB01g04396 Brassica carinata HOM05D000211 ORTHO05D002682 2.1e-64 249.6 189 61.9
A10p13680 Brassica napus HOM05D000211 ORTHO05D002682 2.1e-64 249.6 189 62.4
BraA10t43467Z Brassica rapa HOM05D000211 ORTHO05D002682 2.1e-64 249.6 189 62.4
CDE04G2707 Ceratophyllum demersum HOM05D000211 ORTHO05D002682 2.8e-64 249.2 202 60.9
Thhalv10012928m.g Eutrema salsugineum HOM05D000211 ORTHO05D002682 2.8e-64 249.2 189 61.4
Lj4g0015151 Lotus japonicus HOM05D000211 ORTHO05D002682 2.8e-64 249.2 188 61.2
Nn3g18641 Nelumbo nucifera HOM05D000211 ORTHO05D002682 2.8e-64 249.2 188 63.8
Sc06g0004170 Simmondsia chinensis HOM05D000211 ORTHO05D002682 3.6e-64 248.8 188 64.4
Aa31LG3G12270 Aethionema arabicum HOM05D000211 ORTHO05D002682 4.7e-64 248.4 189 62.4
A03p13510 Brassica napus HOM05D000211 ORTHO05D002682 4.7e-64 248.4 189 61.4
C09p47860 Brassica napus HOM05D000211 ORTHO05D002682 4.7e-64 248.4 189 61.9
BolC9t57624H Brassica oleracea HOM05D000211 ORTHO05D002682 4.7e-64 248.4 189 61.9
ClCG02G024450 Citrullus lanatus HOM05D000211 ORTHO05D002682 4.7e-64 248.4 188 60.6
Sp6g18190 Schrenkiella parvula HOM05D000211 ORTHO05D002682 4.7e-64 248.4 189 61.4
C03p15800 Brassica napus HOM05D000211 ORTHO05D002682 6.1e-64 248.1 189 61.4
Gohir.A13G211300 Gossypium hirsutum HOM05D000211 ORTHO05D002682 6.1e-64 248.1 188 64.4
MD03G1001800 Malus domestica HOM05D000211 ORTHO05D002682 8.0e-64 247.7 188 61.7
MD11G1001700 Malus domestica HOM05D000211 ORTHO05D002682 8.0e-64 247.7 188 62.2
BolC3t14011H Brassica oleracea HOM05D000211 ORTHO05D002682 1.0e-63 247.3 189 60.8
Cc01_g00300 Coffea canephora HOM05D000211 ORTHO05D002682 1.0e-63 247.3 193 62.7
Duzib150G0667 Durio zibethinus HOM05D000211 ORTHO05D002682 1.0e-63 247.3 188 63.8
RcHm_v2.0_Chr5g0084021 Rosa chinensis HOM05D000211 ORTHO05D002682 1.0e-63 247.3 188 61.2
SGA_v2.0_scaffold6G03328 Striga asiatica HOM05D000211 ORTHO05D002682 1.0e-63 247.3 188 62.8
Zm00001eb332690 Zea mays HOM05D000211 ORTHO05D002682 1.4e-63 246.9 188 62.2
MELO3C014731.2 Cucumis melo HOM05D000211 ORTHO05D002682 1.8e-63 246.5 188 61.2
PGR119G2498 Punica granatum HOM05D000211 ORTHO05D002682 2.3e-63 246.1 188 61.7
Sed0010489 Sechium edule HOM05D000211 ORTHO05D002682 2.3e-63 246.1 188 61.2
BraA03t10657Z Brassica rapa HOM05D000211 ORTHO05D002682 3.0e-63 245.7 189 60.8
Carub.0008s1671 Capsella rubella HOM05D000211 ORTHO05D002682 3.0e-63 245.7 189 61.4
Dinv03796 Davidia involucrata HOM05D000211 ORTHO05D002682 3.0e-63 245.7 188 63.3
AT5G56360 Arabidopsis thaliana HOM05D000211 ORTHO05D002682 4.0e-63 245.4 189 60.8
FAN16G2463 Fragaria x ananassa HOM05D000211 ORTHO05D002682 4.0e-63 245.4 188 59.6
FAN11G1410 Fragaria x ananassa HOM05D000211 ORTHO05D002682 5.2e-63 245.0 188 59.6
CsaV3_4G017580 Cucumis sativus L. HOM05D000211 ORTHO05D002682 6.8e-63 244.6 188 60.6
Oeu023969.1 Olea europaea HOM05D000211 ORTHO05D002682 8.9e-63 244.2 166 66.3
Medtr4g083360 Medicago truncatula HOM05D000211 ORTHO05D002682 1.2e-62 243.8 188 60.6
unitig_52.g17523 Utricularia gibba HOM05D000211 ORTHO05D002682 1.2e-62 243.8 196 60.7
Zm00001eb128910 Zea mays HOM05D000211 ORTHO05D002682 1.2e-62 243.8 188 61.7
BcaC01g06420 Brassica carinata HOM05D000211 ORTHO05D002682 2.0e-62 243.0 189 60.3
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 2.0e-62 243.0 196 61.2
Psat7g133280 Pisum sativum HOM05D000211 ORTHO05D002682 4.4e-62 241.9 188 60.1
Solyc12g099660.2 Solanum lycopersicum HOM05D000211 ORTHO05D002682 5.7e-62 241.5 188 58.0
PGSC0003DMG400004640 Solanum tuberosum HOM05D000211 ORTHO05D002682 5.7e-62 241.5 188 58.5
Sopen12g034320 Solanum pennellii HOM05D000211 ORTHO05D002682 7.5e-62 241.1 188 58.0
SGA_v2.0_scaffold3G01698 Striga asiatica HOM05D000211 ORTHO05D002682 7.5e-62 241.1 201 60.2
CAN.G484.26 Capsicum annuum HOM05D000211 ORTHO05D002682 9.8e-62 240.7 188 58.0
FvH4_3g45911 Fragaria vesca HOM05D000211 ORTHO05D002682 2.2e-61 239.6 188 59.0
HanXRQChr07g0186541 Helianthus annuus HOM05D000211 ORTHO05D002682 3.7e-61 238.8 188 60.6
Haze_22924 Corylus avellana HOM05D000211 ORTHO05D002682 1.4e-60 236.9 215 55.8
Migut.N00534 Erythranthe guttata HOM05D000211 ORTHO05D002682 1.4e-60 236.9 183 62.3
Eucgr.J01751 Eucalyptus grandis HOM05D000211 ORTHO05D002682 1.8e-60 236.5 183 60.1
THA.LOC104813476 Tarenaya hassleriana HOM05D000211 ORTHO05D002682 5.4e-60 235.0 188 59.6
ECA238G0311 Erigeron canadensis HOM05D000211 ORTHO05D002682 2.0e-59 233.0 188 58.0
Prupe.6G001700 Prunus persica HOM05D000211 ORTHO05D002682 2.0e-59 233.0 166 66.9
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 1.0e-58 230.7 171 63.7
MBI19_g09314_MAGBIO Magnolia biondii HOM05D000211 ORTHO05D002682 1.7e-58 229.9 166 63.9
Nitab4.5_0004741g0050 Nicotiana tabacum HOM05D000211 ORTHO05D002682 5.0e-58 228.4 199 56.8
FAN25G3011 Fragaria x ananassa HOM05D000211 ORTHO05D002682 6.6e-58 228.0 166 60.8
ECA233G3904 Erigeron canadensis HOM05D000211 ORTHO05D002682 2.5e-57 226.1 170 62.9
TAR633G1501 Trochodendron aralioides HOM05D000211 ORTHO05D002682 2.1e-56 223.0 149 69.1
Nitab4.5_0000570g0080 Nicotiana tabacum HOM05D000211 ORTHO05D002682 2.0e-54 216.5 189 56.6
HanXRQChr14g0437141 Helianthus annuus HOM05D000211 ORTHO05D002682 2.6e-54 216.1 171 57.9
Peaxi162Scf00086g00328 Petunia axillaris HOM05D000211 ORTHO05D002682 7.5e-54 214.5 209 52.6
DCAR_023822 Daucus carota HOM05D000211 ORTHO05D002682 1.2e-51 207.2 188 56.9
SEGI_17374 Sequoiadendron giganteum HOM05D000211 ORTHO05D002682 6.0e-51 204.9 166 58.4
Nitab4.5_0004438g0080 Nicotiana tabacum HOM05D000211 ORTHO05D002682 1.3e-50 203.8 150 61.3
BcaC04g20099 Brassica carinata HOM05D000211 ORTHO05D002682 3.9e-50 202.2 189 53.4
Pp3c22_18260 Physcomitrium patens HOM05D000211 ORTHO05D002682 6.6e-50 201.4 171 55.6
Lsat_1_v5_gn_6_56060 Lactuca sativa HOM05D000211 ORTHO05D002682 1.6e-48 196.8 153 57.5
Mapoly0057s0106 Marchantia polymorpha HOM05D000211 ORTHO05D002682 4.7e-48 195.3 171 52.0
SMO133G0027 Selaginella moellendorffii HOM05D000211 ORTHO05D002682 3.1e-47 192.6 166 53.0
TAR636G1134 Trochodendron aralioides HOM05D000211 ORTHO05D002682 3.1e-47 192.6 129 69.0
AagrBONN_evm.TU.Sc2ySwM_344.2520 Anthoceros agrestis HOM05D000211 ORTHO05D002682 2.6e-46 189.5 188 48.9
Rhsim13G0234500 Rhododendron simsii HOM05D000211 ORTHO05D002682 9.8e-46 187.6 245 42.9
CSS0039902 Camellia sinensis var. sinensis HOM05D000211 ORTHO05D002682 6.4e-45 184.9 188 52.1
CDE02G3536 Ceratophyllum demersum HOM05D000211 ORTHO05D002682 8.3e-45 184.5 202 49.5
FAN21G3711 Fragaria x ananassa HOM05D000211 ORTHO05D002682 5.1e-42 175.3 188 47.3
Lsat_1_v5_gn_2_50861 Lactuca sativa HOM05D000211 ORTHO05D002682 1.2e-38 164.1 127 60.6
Cpa.g.sc119.26 Carica papaya HOM05D000211 ORTHO05D002682 6.4e-37 158.3 122 62.3
Ca_18790_v3 Cicer arietinum L. HOM05D000211 ORTHO05D002682 9.5e-33 144.4 188 43.6
Gorai.013G117500 Gossypium raimondii HOM05D000211 ORTHO05D002682 2.9e-29 132.9 99 60.6
Gohir.D13G104718 Gossypium hirsutum HOM05D000211 ORTHO05D002682 3.2e-28 129.4 99 59.6
Nitab4.5_0002741g0040 Nicotiana tabacum HOM05D000211 ORTHO05D002682 2.1e-27 126.7 188 38.8
Peaxi162Scf00004g02724 Petunia axillaris HOM05D000211 ORTHO05D002682 8.7e-26 121.3 190 38.9
Lsat_1_v5_gn_4_29281 Lactuca sativa HOM05D000211 ORTHO05D002682 6.9e-23 111.7 73 69.9
CBR_g20370 Chara braunii HOM05D000019 ORTHO05D000353 9.0e-23 111.3 180 35.6
MCO06G050 Micromonas commoda HOM05D000211 ORTHO05D002682 4.4e-22 109.0 173 37.0
Cre17.g725350 Chlamydomonas reinhardtii HOM05D000211 ORTHO05D002682 3.0e-18 96.3 164 35.4
Lj6A294G9 Lonicera japonica HOM05D000211 ORTHO05D002682 3.9e-18 95.9 77 55.8
Potri.001G001700 Populus trichocarpa HOM05D000211 ORTHO05D002682 1.5e-17 94.0 77 54.5
Hund13814 Selenicereus undatus HOM05D000211 ORTHO05D002682 5.8e-14 82.0 83 51.8
PRCOL_00005414 Prasinoderma coloniale HOM05D000211 ORTHO05D002682 2.2e-13 80.1 129 36.4
SMO081G0002 Selaginella moellendorffii HOM05D000211 ORTHO05D002682 2.1e-11 73.6 43 69.8
Cfa026088 Carpinus fangiana HOM05D000211 ORTHO05D002682 1.9e-09 67.0 159 28.3


User provided reference genes

Program Settings