Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 1.1e-156 556.6 273 100.0
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 1.6e-128 463.0 274 84.3
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 5.5e-121 438.0 278 79.9
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 1.1e-110 403.7 281 72.6
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 6.3e-109 397.9 285 73.0
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 2.0e-107 392.9 285 71.9
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 1.0e-106 390.6 283 72.8
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 3.8e-106 388.7 297 70.0
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 1.4e-105 386.7 285 70.2
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 8.0e-104 380.9 285 70.5
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.0e-103 380.6 285 70.5
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.3e-103 379.4 283 69.3
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 8.8e-103 377.5 285 68.8
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 8.8e-103 377.5 283 70.3
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 4.4e-102 375.2 279 69.5
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 5.7e-102 374.8 285 69.1
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.4e-100 370.2 285 68.8
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 2.6e-99 365.9 283 66.4
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 5.9e-99 364.8 293 65.2
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 1.0e-98 364.0 282 69.5
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 1.7e-98 363.2 281 68.7
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 2.9e-98 362.5 275 68.7
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 3.8e-98 362.1 280 67.9
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 1.1e-97 360.5 289 64.7
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 1.1e-97 360.5 291 64.6
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 1.9e-97 359.8 277 67.5
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 1.9e-97 359.8 283 65.7
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 2.5e-97 359.4 276 67.8
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 4.2e-97 358.6 187 90.9
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 1.2e-96 357.1 276 67.4
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 1.2e-96 357.1 292 64.0
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 2.1e-96 356.3 284 65.8
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 2.7e-96 355.9 290 64.5
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 4.7e-96 355.1 302 61.6
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 8.0e-96 354.4 317 60.3
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 8.0e-96 354.4 270 70.4
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 1.0e-95 354.0 288 65.6
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 1.8e-95 353.2 295 63.7
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 2.3e-95 352.8 288 63.9
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 3.0e-95 352.4 282 65.6
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 1.5e-94 350.1 294 63.3
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 4.4e-94 348.6 290 63.8
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 4.4e-94 348.6 277 64.6
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 5.7e-94 348.2 288 64.6
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 7.5e-94 347.8 287 63.1
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 7.5e-94 347.8 275 65.8
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 1.3e-93 347.1 290 62.1
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 3.7e-93 345.5 284 65.1
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 2.4e-92 342.8 288 62.2
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 9.1e-92 340.9 197 84.3
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 3.5e-91 339.0 193 81.9
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 7.7e-91 337.8 220 74.5
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 7.7e-91 337.8 220 74.5
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 7.7e-91 337.8 220 74.5
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 1.3e-90 337.0 272 63.6
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 2.2e-90 336.3 279 65.9
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 3.8e-90 335.5 272 62.5
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 1.1e-89 334.0 288 62.5
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 1.5e-89 333.6 292 62.7
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 1.5e-89 333.6 297 61.6
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 3.2e-89 332.4 280 64.3
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 5.5e-89 331.6 289 63.7
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 1.6e-88 330.1 292 60.3
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 1.6e-88 330.1 287 61.3
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 2.1e-88 329.7 287 61.0
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 2.7e-88 329.3 189 83.6
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 4.7e-88 328.6 231 69.3
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 1.4e-87 327.0 286 60.5
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 3.0e-87 325.9 195 81.0
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 4.0e-87 325.5 305 59.0
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 5.2e-87 325.1 241 67.2
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 8.8e-87 324.3 283 62.5
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 4.4e-86 322.0 192 79.7
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 5.7e-86 321.6 285 62.5
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 1.3e-85 320.5 187 79.7
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 5.4e-84 315.1 161 95.7
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 7.7e-83 311.2 184 77.7
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 2.9e-82 309.3 171 85.4
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 3.6e-80 302.4 273 61.5
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 1.0e-79 300.8 210 72.9
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 1.8e-79 300.1 286 57.0
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 7.5e-78 294.7 156 89.7
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 4.9e-77 292.0 191 72.3
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 1.8e-76 290.0 235 64.7
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 3.2e-76 289.3 165 83.6
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 4.1e-76 288.9 283 59.0
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 2.7e-75 286.2 166 79.5
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 3.9e-74 282.3 332 48.2
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 4.4e-70 268.9 156 83.3
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 5.8e-70 268.5 244 59.4
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 4.1e-68 262.3 274 54.7
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.0e-66 257.7 172 69.2
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 2.3e-63 246.5 243 58.4
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 8.9e-63 244.6 148 77.7
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 2.4e-60 236.5 290 50.0
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 1.6e-59 233.8 228 60.1
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 8.6e-58 228.0 166 65.1
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 1.4e-55 220.7 251 45.4
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.2e-54 217.6 200 52.5
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 4.4e-54 215.7 197 53.8
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 1.7e-53 213.8 201 52.2
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.6e-51 207.2 285 47.4
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 4.3e-49 199.1 235 51.1
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 1.2e-48 197.6 272 45.2
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 4.4e-46 189.1 187 47.1
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 3.2e-44 183.0 200 51.5
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 6.6e-42 175.3 206 47.6
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 6.2e-40 168.7 114 72.8
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 1.4e-39 167.5 330 34.8
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 1.6e-35 154.1 112 67.0
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 1.0e-34 151.4 196 42.9
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 4.0e-31 139.4 176 41.5
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 1.3e-21 107.8 107 53.3
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 1.3e-10 71.2 45 71.1
Nitab4.5_0000001g0050 Nicotiana tabacum HOM05D006942 ORTHO05D008737 1.8e-07 60.8 130 40.8
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 4.5e-06 56.2 50 52.0
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 1.0e-05 55.1 64 37.5


User provided reference genes

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