Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 1.6e-155 552.7 286 100.0
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 3.7e-128 461.8 269 86.6
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 2.0e-126 456.1 309 80.9
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 9.5e-116 420.6 286 74.8
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 2.3e-114 416.0 286 72.0
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 3.1e-114 415.6 286 71.7
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 2.0e-113 412.9 287 72.8
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 1.1e-111 407.1 286 70.6
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 1.9e-111 406.4 288 73.3
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 1.6e-110 403.3 286 72.7
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 1.3e-109 400.2 286 72.0
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 1.7e-109 399.8 288 71.9
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 5.0e-109 398.3 286 71.0
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 5.0e-109 398.3 286 69.6
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 6.6e-109 397.9 288 70.8
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 6.6e-109 397.9 286 72.0
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 1.5e-108 396.7 286 69.9
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 1.5e-108 396.7 288 71.5
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 1.5e-108 396.7 288 70.8
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 4.3e-108 395.2 288 70.8
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 1.6e-107 393.3 286 69.9
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 3.6e-107 392.1 287 70.7
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 1.1e-106 390.6 287 69.0
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 1.1e-106 390.6 287 69.7
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 1.1e-106 390.6 286 69.6
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 1.8e-106 389.8 287 69.3
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 1.2e-105 387.1 287 69.0
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 2.0e-105 386.3 283 67.5
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 2.6e-105 386.0 286 68.2
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 2.2e-104 382.9 287 68.3
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 2.9e-104 382.5 288 68.8
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 4.9e-104 381.7 288 68.4
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 1.2e-102 377.1 291 67.7
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 1.2e-102 377.1 290 68.3
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.1e-102 376.3 287 67.6
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 2.1e-102 376.3 289 66.8
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 7.8e-102 374.4 286 64.7
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 2.3e-101 372.9 289 68.2
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 2.3e-101 372.9 239 78.2
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 3.9e-101 372.1 287 66.9
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 1.5e-100 370.2 288 66.0
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 3.3e-100 369.0 289 65.4
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 3.3e-100 369.0 282 66.3
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 5.6e-100 368.2 286 66.8
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 7.3e-100 367.9 257 73.5
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 7.3e-100 367.9 283 66.1
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.2e-99 367.1 286 66.8
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 1.2e-99 367.1 289 66.4
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 6.2e-99 364.8 287 65.9
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 1.8e-98 363.2 286 64.0
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 8.9e-98 360.9 267 68.9
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 1.2e-97 360.5 288 65.3
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 1.5e-97 360.1 290 66.2
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 2.0e-97 359.8 290 66.2
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 2.0e-97 359.8 299 64.2
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 4.4e-97 358.6 297 64.6
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 5.8e-97 358.2 290 65.5
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 9.9e-97 357.5 290 64.1
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 9.9e-97 357.5 290 64.1
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 1.3e-96 357.1 287 65.2
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 2.9e-96 355.9 254 71.7
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 3.7e-96 355.5 290 64.5
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 3.7e-96 355.5 296 61.5
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 4.9e-96 355.1 290 64.1
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 4.9e-96 355.1 286 61.2
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 1.1e-95 354.0 245 73.1
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 1.1e-95 354.0 288 64.2
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 1.9e-95 353.2 289 64.7
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 5.4e-95 351.7 296 62.5
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 7.1e-95 351.3 287 62.7
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 3.5e-94 349.0 292 61.6
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 1.3e-93 347.1 298 62.4
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.6e-93 344.7 266 66.2
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 6.6e-93 344.7 274 65.0
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 8.6e-93 344.4 287 63.4
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 8.6e-93 344.4 277 64.6
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 1.5e-92 343.6 274 65.0
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 1.9e-92 343.2 272 63.6
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 2.5e-92 342.8 224 74.6
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 4.3e-92 342.0 284 63.7
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 9.6e-92 340.9 279 65.2
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 1.2e-91 340.5 284 61.6
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 1.4e-90 337.0 280 61.8
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 1.8e-90 336.7 268 64.6
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 3.1e-90 335.9 268 64.9
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 3.1e-90 335.9 235 72.3
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 2.6e-89 332.8 277 63.9
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 2.6e-89 332.8 257 67.3
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 3.8e-88 328.9 274 62.4
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 4.2e-87 325.5 294 59.2
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 9.3e-87 324.3 284 61.6
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 5.1e-85 318.5 269 61.7
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 1.5e-84 317.0 248 65.7
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 7.3e-84 314.7 245 66.5
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 1.3e-80 303.9 287 55.7
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 7.1e-79 298.1 237 64.6
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 2.7e-78 296.2 243 65.4
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 1.3e-77 293.9 269 59.9
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 1.5e-76 290.4 236 59.7
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 5.5e-71 271.9 231 57.6
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 9.3e-71 271.2 183 71.0
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 5.1e-69 265.4 175 75.4
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 8.7e-69 264.6 222 59.0
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 1.5e-68 263.8 173 75.1
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 9.6e-68 261.2 330 46.7
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.5e-65 253.8 222 56.3
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 4.5e-65 252.3 269 50.9
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 6.0e-62 241.9 233 51.1
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 3.1e-58 229.6 251 48.2
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.2e-57 227.6 266 49.6
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 1.9e-55 220.3 253 47.8
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 2.7e-54 216.5 253 46.6
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 6.1e-54 215.3 186 57.0
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 3.0e-53 213.0 167 63.5
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 1.5e-52 210.7 237 52.7
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 1.5e-44 184.1 130 76.2
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 3.3e-44 183.0 112 76.8
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 4.8e-43 179.1 223 47.5
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 5.7e-36 155.6 123 62.6
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 1.1e-34 151.4 224 38.8
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 5.5e-31 139.0 133 56.4
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 7.2e-31 138.7 188 42.0
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 6.3e-27 125.6 81 71.6
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 6.3e-27 125.6 81 70.4
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 5.3e-26 122.5 81 70.4
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 5.3e-26 122.5 74 78.4
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 5.0e-24 115.9 82 69.5
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.2e-20 104.8 103 56.3
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.2e-20 104.8 103 56.3
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 1.5e-20 104.4 103 55.3
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 4.4e-20 102.8 103 55.3
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 5.7e-20 102.4 103 55.3
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 2.7e-17 93.6 196 32.1
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 1.0e-16 91.7 207 31.4
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 8.5e-16 88.6 80 60.0
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 8.0e-14 82.0 106 48.1
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 5.7e-12 75.9 60 66.7
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 1.3e-11 74.7 52 69.2
Phvul.005G084700 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 2.8e-11 73.6 131 38.2
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 4.9e-11 72.8 54 70.4
MCO09G447 Micromonas commoda HOM05D005617 ORTHO05D006847 2.4e-10 70.5 227 29.1
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 1.2e-09 68.2 68 50.0
Cre03.g171100 Chlamydomonas reinhardtii HOM05D005617 ORTHO05D006847 1.5e-07 61.2 214 27.1


User provided reference genes

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