Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 2.7e-258 894.8 452 100.0
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 9.4e-227 790.0 453 87.4
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 2.9e-183 645.6 457 73.3
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 9.2e-174 614.0 457 71.1
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 1.1e-171 607.1 460 66.7
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 9.6e-171 604.0 456 68.4
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 4.7e-170 601.7 453 69.3
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 6.9e-169 597.8 453 68.9
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 9.0e-169 597.4 454 68.5
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 5.8e-168 594.7 452 69.0
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 3.8e-167 592.0 414 72.9
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 4.9e-167 591.7 467 68.3
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.4e-166 590.1 455 66.4
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 1.4e-166 590.1 467 68.3
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 2.4e-166 589.3 453 66.9
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 4.2e-166 588.6 456 67.8
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.1e-165 586.3 455 66.4
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.7e-164 583.2 455 65.5
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 1.6e-162 576.6 457 66.1
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 1.8e-161 573.2 450 66.2
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 2.2e-159 566.2 393 72.5
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.9e-159 565.8 387 71.6
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 1.4e-158 563.5 436 66.3
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 5.4e-158 561.6 436 66.1
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 4.6e-157 558.5 453 64.9
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 6.0e-157 558.1 455 64.2
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 6.0e-157 558.1 449 64.4
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 7.9e-157 557.8 436 65.8
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 1.3e-156 557.0 450 64.2
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 5.6e-155 551.6 456 65.1
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 9.0e-153 544.3 411 67.6
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 3.2e-150 535.8 449 61.2
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 5.5e-150 535.0 441 64.9
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 7.1e-150 534.6 468 60.3
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 9.3e-150 534.3 458 62.0
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 6.0e-149 531.6 398 67.6
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 3.9e-148 528.9 418 65.1
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 1.1e-147 527.3 411 67.4
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 3.3e-147 525.8 411 66.2
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 2.9e-143 512.7 406 66.3
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 8.4e-143 511.1 429 62.2
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 1.4e-142 510.4 454 60.1
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 2.5e-142 509.6 391 66.0
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 1.6e-141 506.9 459 59.0
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 3.5e-141 505.8 460 60.7
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 1.5e-139 500.4 455 59.6
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 1.9e-139 500.0 457 59.3
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 9.7e-139 497.7 453 60.3
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.2e-138 496.5 453 60.3
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 4.8e-138 495.4 402 62.9
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 6.3e-138 495.0 464 59.1
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 8.2e-138 494.6 455 60.7
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 1.8e-137 493.4 458 60.3
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 2.4e-137 493.0 458 59.8
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 3.1e-137 492.7 438 58.2
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 6.9e-137 491.5 438 58.2
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 1.2e-136 490.7 458 59.8
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 1.2e-136 490.7 458 59.8
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 1.2e-136 490.7 459 59.9
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.2e-136 490.7 422 61.8
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 2.6e-136 489.6 457 59.1
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 3.4e-136 489.2 458 59.0
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 1.3e-135 487.3 459 58.8
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.2e-133 480.7 460 58.0
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 3.6e-133 479.2 405 62.0
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 4.6e-133 478.8 328 70.4
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 1.0e-132 477.6 456 56.6
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 1.0e-132 477.6 465 55.3
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 1.0e-132 477.6 395 61.0
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 1.8e-132 476.9 446 57.4
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 1.8e-132 476.9 421 60.6
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 3.0e-132 476.1 440 59.5
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 5.1e-132 475.3 408 61.5
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 5.1e-132 475.3 470 55.1
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 6.7e-132 474.9 409 61.9
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 3.3e-131 472.6 408 61.3
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 7.4e-131 471.5 460 56.7
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 1.3e-130 470.7 451 56.8
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 2.2e-130 469.9 402 61.9
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 1.1e-129 467.6 436 57.6
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 1.1e-129 467.6 405 60.7
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 1.4e-129 467.2 462 55.8
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 4.1e-129 465.7 462 56.1
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 5.0e-127 458.8 422 59.2
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 5.0e-127 458.8 422 59.2
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 1.9e-126 456.8 401 60.6
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 2.5e-126 456.4 470 53.6
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 5.5e-126 455.3 454 56.4
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.1e-121 441.0 431 57.1
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 1.0e-119 434.5 406 55.2
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 1.0e-119 434.5 342 62.3
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 1.0e-119 434.5 456 54.8
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 2.2e-119 433.3 383 57.4
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.9e-118 430.3 383 57.2
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 9.4e-118 427.9 446 52.0
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 2.3e-116 423.3 466 52.4
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 6.3e-114 415.2 379 56.7
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 5.3e-113 412.1 430 54.4
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 1.6e-112 410.6 334 67.7
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 5.0e-111 405.6 347 63.1
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 8.0e-109 398.3 429 53.1
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 1.2e-107 394.4 452 50.4
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 5.7e-107 392.1 438 51.4
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 1.1e-105 387.9 346 56.1
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 2.2e-98 363.6 338 60.7
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 5.9e-96 355.5 419 49.4
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 8.0e-93 345.1 255 69.4
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 1.1e-89 334.7 371 53.9
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 3.1e-89 333.2 227 70.9
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.6e-85 320.9 349 53.9
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 1.0e-84 318.2 415 45.3
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 4.3e-78 296.2 416 43.8
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 8.9e-76 288.5 441 43.1
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 2.2e-74 283.9 460 43.7
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 3.2e-73 280.0 253 62.8
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 3.4e-67 260.0 166 72.9
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 1.6e-64 251.1 236 56.4
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 6.8e-60 235.7 398 40.2
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 5.8e-59 232.6 395 38.7
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 5.4e-57 226.1 399 37.8
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 8.4e-50 202.2 406 36.7
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 3.8e-26 123.6 108 59.3
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 2.3e-23 114.4 420 28.3
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 8.7e-23 112.5 250 34.4
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 2.4e-20 104.4 81 63.0
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 6.9e-20 102.8 166 38.6
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 6.1e-16 89.7 350 26.6
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 3.0e-15 87.4 206 32.5
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 4.3e-14 83.6 157 36.9
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 5.9e-11 73.2 411 25.5
TAR362G0073 Trochodendron aralioides HOM05D001652 ORTHO05D001768 3.2e-09 67.4 78 51.3


User provided reference genes

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