Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G034600 Populus trichocarpa HOM05D049348 ORTHO05D036645 1.1e-78 296.6 157 100.0
Sabra13G0033400 Salix brachista HOM05D049348 ORTHO05D036645 6.7e-55 217.6 154 74.0
Manes.12G119300 Manihot esculenta HOM05D000203 ORTHO05D036645 4.0e-15 85.5 129 38.8
Duzib147G1623 Durio zibethinus HOM05D000203 ORTHO05D000135 8.3e-13 77.8 161 37.9
Nn8g40832 Nelumbo nucifera HOM05D000203 ORTHO05D000135 4.5e-11 72.0 143 32.9
Dinv12564 Davidia involucrata HOM05D000203 ORTHO05D000135 1.7e-10 70.1 133 33.8
Ciclev10027154m.g Citrus clementina HOM05D000203 ORTHO05D000135 6.6e-10 68.2 126 34.9
CSS0003670 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 3.3e-09 65.9 137 37.2
CSS0030150 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 3.3e-09 65.9 137 37.2
Ciclev10030387m.g Citrus clementina HOM05D000203 ORTHO05D000135 5.6e-09 65.1 91 40.7
CSS0049268 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 9.5e-09 64.3 166 30.7
Hma1.2p1_1051F.1_g252260 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 9.5e-09 64.3 116 34.5
Cc02_g20220 Coffea canephora HOM05D000203 ORTHO05D000135 1.6e-08 63.5 102 36.3
CSS0043673 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 2.8e-08 62.8 123 33.3
TWI36G0397 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 2.8e-08 62.8 84 38.1
CSS0011968 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 3.6e-08 62.4 136 35.3
TAR628G0844 Trochodendron aralioides HOM05D000203 ORTHO05D000135 6.1e-08 61.6 129 34.1
CSS0014520 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 1.0e-07 60.8 104 31.7
TAR628G1410 Trochodendron aralioides HOM05D000203 ORTHO05D000135 1.0e-07 60.8 111 35.1
GSVIVG01037031001 Vitis vinifera HOM05D000203 ORTHO05D000135 1.0e-07 60.8 143 28.7
MELO3C018030.2 Cucumis melo HOM05D000203 ORTHO05D000135 1.4e-07 60.5 130 31.5
TAR285G0001 Trochodendron aralioides HOM05D000203 ORTHO05D000135 1.4e-07 60.5 151 29.8
CSS0008388 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 1.8e-07 60.1 166 30.1
TWI75G1001 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 1.8e-07 60.1 81 37.0
Peaxi162Scf00249g00064 Petunia axillaris HOM05D000203 ORTHO05D000135 2.3e-07 59.7 123 33.3
Prupe.8G152000 Prunus persica HOM05D000203 ORTHO05D000135 2.3e-07 59.7 126 29.4
Actinidia00343 Actinidia chinensis HOM05D001079 ORTHO05D000135 3.0e-07 59.3 144 31.2
CiPaw.06G163000 Carya illinoinensis HOM05D000203 ORTHO05D000135 3.0e-07 59.3 79 40.5
Lj9C337T6 Lonicera japonica HOM05D000203 ORTHO05D000135 3.0e-07 59.3 163 30.1
Nitab4.5_0004004g0010 Nicotiana tabacum HOM05D000203 ORTHO05D000135 3.0e-07 59.3 118 33.9
PGR142G0376 Punica granatum HOM05D000203 ORTHO05D000135 3.0e-07 59.3 148 29.7
ClCG10G009960 Citrullus lanatus HOM05D000203 ORTHO05D000135 4.0e-07 58.9 138 29.7
CsaV3_4G000010 Cucumis sativus L. HOM05D000203 ORTHO05D000135 4.0e-07 58.9 142 28.9
CSS0044339 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 5.2e-07 58.5 166 29.5
Ciclev10030142m.g Citrus clementina HOM05D000203 ORTHO05D000135 5.2e-07 58.5 142 33.1
TAR285G0004 Trochodendron aralioides HOM05D000203 ORTHO05D000135 5.2e-07 58.5 151 27.8
CSS0029942 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 6.8e-07 58.2 137 37.2
Oeu017584.1 Olea europaea HOM05D000203 ORTHO05D000135 6.8e-07 58.2 152 28.9
CSS0021382 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 8.9e-07 57.8 137 37.2
Oeu025302.1 Olea europaea HOM05D000203 ORTHO05D000135 8.9e-07 57.8 137 29.2
Sed0009196 Sechium edule HOM05D000203 ORTHO05D000135 8.9e-07 57.8 122 31.1
TAR628G1329 Trochodendron aralioides HOM05D000894 ORTHO05D001833 8.9e-07 57.8 120 30.0
TAR628G1507 Trochodendron aralioides HOM05D000203 ORTHO05D000135 8.9e-07 57.8 106 34.9
CSS0006714 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 1.2e-06 57.4 166 29.5
CSS0035867 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 1.2e-06 57.4 125 36.0
Nitab4.5_0005046g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 1.2e-06 57.4 98 35.7
Atru.chr6.1457 Acer truncatum HOM05D000203 ORTHO05D000135 1.5e-06 57.0 141 31.9
Sabra09G0064900 Salix brachista HOM05D000203 ORTHO05D000135 2.0e-06 56.6 149 31.5
CSS0040451 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 2.6e-06 56.2 132 31.8
Gohir.A06G136800 Gossypium hirsutum HOM05D000203 ORTHO05D000135 4.4e-06 55.5 80 37.5
Cfa000969 Carpinus fangiana HOM05D000203 ORTHO05D000135 5.8e-06 55.1 108 31.5
DCAR_022542 Daucus carota HOM05D000203 ORTHO05D000135 5.8e-06 55.1 95 33.7
HanXRQChr14g0456481 Helianthus annuus HOM05D000203 ORTHO05D000135 5.8e-06 55.1 112 33.9
Potri.008G041500 Populus trichocarpa HOM05D000203 ORTHO05D000135 5.8e-06 55.1 92 35.9
QL06p038169 Quercus lobata HOM05D000203 ORTHO05D000135 5.8e-06 55.1 139 30.2
QL11p028631 Quercus lobata HOM05D000203 ORTHO05D000135 7.5e-06 54.7 77 37.7
Cpa.g.sc505.6 Carica papaya HOM05D000203 ORTHO05D000135 9.8e-06 54.3 112 35.7
Ciclev10023796m.g Citrus clementina HOM05D000203 ORTHO05D000135 9.8e-06 54.3 71 42.3
ECA238G3159 Erigeron canadensis HOM05D000203 ORTHO05D000135 9.8e-06 54.3 132 34.1
Gohir.A03G213500 Gossypium hirsutum HOM05D000203 ORTHO05D000135 9.8e-06 54.3 83 32.5
Oeu017586.1 Olea europaea HOM05D000203 ORTHO05D000135 9.8e-06 54.3 159 28.3
QL11p028754 Quercus lobata HOM05D000203 ORTHO05D000135 9.8e-06 54.3 77 37.7
GSVIVG01037024001 Vitis vinifera HOM05D000203 ORTHO05D000135 9.8e-06 54.3 137 26.3


User provided reference genes

Program Settings