Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 5.8e-235 817.8 627 100.0
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 3.6e-176 622.5 627 79.3
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 2.9e-141 506.5 577 64.5
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 9.7e-105 385.2 627 56.8
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 2.0e-81 307.8 634 44.3
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 5.0e-77 293.1 639 43.2
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 2.6e-73 280.8 637 42.5
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 9.2e-71 272.3 641 39.5
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 1.5e-68 265.0 586 40.1
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 5.2e-66 256.5 636 44.5
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 4.6e-62 243.4 636 44.5
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 6.6e-53 213.0 655 34.8
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 2.8e-51 207.6 612 35.8
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 1.1e-50 205.7 630 34.3
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 2.6e-49 201.1 669 38.9
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 7.5e-49 199.5 671 38.7
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 4.1e-47 193.7 246 47.2
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 1.6e-46 191.8 668 37.9
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 1.3e-45 188.7 605 28.1
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 6.6e-45 186.4 638 39.5
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 1.1e-44 185.7 668 37.6
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 7.3e-44 183.0 639 36.2
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.8e-42 178.3 637 35.5
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 6.8e-42 176.4 657 27.4
Atru.chr2.532 Acer truncatum HOM05D004923 ORTHO05D005940 4.4e-41 173.7 632 41.1
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 9.9e-41 172.6 598 26.9
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 1.7e-40 171.8 522 33.3
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 2.9e-40 171.0 578 33.2
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 6.4e-40 169.9 605 27.3
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.4e-39 168.7 665 40.0
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 1.4e-39 168.7 635 32.6
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 4.1e-39 167.2 576 35.6
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 1.6e-38 165.2 635 35.0
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 1.6e-38 165.2 627 25.7
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 2.7e-38 164.5 603 28.2
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 2.3e-37 161.4 634 32.0
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 3.9e-37 160.6 235 46.0
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 5.1e-37 160.2 649 32.0
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 6.6e-37 159.8 637 27.0
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 6.6e-37 159.8 584 27.7
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 2.5e-36 157.9 635 42.2
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 3.3e-36 157.5 657 26.5
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 5.6e-36 156.8 650 32.5
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 1.2e-35 155.6 860 32.2
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 2.1e-35 154.8 751 31.3
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.1e-35 154.8 684 35.8
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 2.8e-35 154.5 677 37.2
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 4.7e-35 153.7 576 29.7
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 6.2e-35 153.3 209 45.9
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 1.4e-34 152.1 634 39.9
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 4.0e-34 150.6 245 40.8
Sed0008414 Sechium edule HOM05D004923 ORTHO05D005940 2.6e-33 147.9 636 26.3
Carub.0006s2521 Capsella rubella HOM05D004923 ORTHO05D005940 3.4e-33 147.5 636 34.7
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 3.4e-33 147.5 673 37.4
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 3.4e-33 147.5 631 33.6
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 5.8e-33 146.7 665 39.2
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 5.8e-33 146.7 634 30.3
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 4.9e-32 143.7 651 37.8
AT3G05130 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 8.4e-32 142.9 636 32.9
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 8.4e-32 142.9 629 25.6
MELO3C004316.2 Cucumis melo HOM05D004923 ORTHO05D005940 1.4e-31 142.1 630 24.8
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 2.4e-31 141.4 641 30.1
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 5.4e-31 140.2 643 36.5
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 7.1e-31 139.8 674 37.5
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.7e-30 137.9 673 37.3
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 1.0e-29 136.0 613 33.6
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 3.3e-28 131.0 241 37.8
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 3.6e-27 127.5 587 30.3
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 4.8e-27 127.1 640 30.9
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 1.8e-26 125.2 234 37.6
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 2.4e-26 124.8 643 32.2
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 4.5e-25 120.6 634 26.7
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 4.5e-25 120.6 634 26.7
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 1.7e-24 118.6 646 29.1
THA.LOC104821702 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 1.7e-24 118.6 632 32.0
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 8.4e-24 116.3 243 33.3
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 1.4e-23 115.5 244 35.7
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 3.2e-23 114.4 212 36.3
AUR62000899 Chenopodium quinoa HOM05D004923 ORTHO05D005940 4.2e-23 114.0 601 23.6
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 4.2e-23 114.0 220 37.3
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 7.1e-23 113.2 581 24.8
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 9.3e-23 112.8 226 36.3
Lj5g0013750 Lotus japonicus HOM05D004923 ORTHO05D005940 1.6e-22 112.1 713 28.5
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 1.0e-21 109.4 647 24.4
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 1.8e-21 108.6 657 26.2
AUR62005075 Chenopodium quinoa HOM05D004923 ORTHO05D005940 5.1e-21 107.1 527 23.0
SalBow6G2889 Salvia bowleyana HOM05D004923 ORTHO05D005940 2.5e-20 104.8 637 24.2
BcaNung02477 Brassica carinata HOM05D004923 ORTHO05D005940 3.3e-20 104.4 576 29.9
Atru.chr5.1952 Acer truncatum HOM05D000107 ORTHO05D000062 4.8e-19 100.5 178 37.1
HanXRQChr15g0493471 Helianthus annuus HOM05D004923 ORTHO05D005940 1.4e-18 99.0 243 31.7
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 1.8e-18 98.6 630 34.9
CsaV3_2G004820 Cucumis sativus L. HOM05D004923 ORTHO05D005940 1.8e-18 98.6 659 22.9
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 2.4e-18 98.2 503 32.4
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 3.1e-18 97.8 240 33.3
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 4.0e-18 97.4 243 33.3
MD04G1212300 Malus domestica HOM05D004923 ORTHO05D005940 5.3e-18 97.1 644 28.4
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 1.5e-17 95.5 242 28.9
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 2.6e-17 94.7 577 23.2
ECA233G0604 Erigeron canadensis HOM05D004923 ORTHO05D005940 2.2e-16 91.7 212 33.0
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 2.9e-16 91.3 227 32.6
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 2.9e-16 91.3 227 32.6
Aa31LG11G9060 Aethionema arabicum HOM05D004923 ORTHO05D005940 3.8e-16 90.9 576 33.0
BraA06t26683Z Brassica rapa HOM05D004923 ORTHO05D005940 3.8e-16 90.9 137 43.8
DCAR_029454 Daucus carota HOM05D004923 ORTHO05D005940 1.1e-15 89.4 638 35.3
Aqoxy2G03170 Aquilegia oxysepala HOM05D004923 ORTHO05D005940 1.4e-15 89.0 246 30.5
Ah.04g159900 Amaranthus hybridus HOM05D004923 ORTHO05D005940 7.1e-15 86.7 249 27.3
BolC7t44596H Brassica oleracea HOM05D004923 ORTHO05D005940 7.1e-15 86.7 133 42.9
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 9.3e-15 86.3 242 30.2
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 1.2e-14 85.9 148 39.9
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 1.6e-14 85.5 128 41.4
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 1.0e-13 82.8 135 40.0
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 3.9e-13 80.9 137 40.9
TPR.G2744 Trifolium pratense HOM05D004923 ORTHO05D005940 3.9e-13 80.9 168 38.7
CAN.G65.101 Capsicum annuum HOM05D004923 ORTHO05D005940 6.7e-13 80.1 151 33.8
AL3G15330 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.5e-12 79.0 210 30.0
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 1.5e-12 79.0 107 46.7
Ah.04g159880 Amaranthus hybridus HOM05D004923 ORTHO05D005940 9.6e-12 76.3 622 24.9
Medtr1g082215 Medicago truncatula HOM05D004923 ORTHO05D005940 9.6e-12 76.3 707 28.1
PSO151G0084 Papaver somniferum HOM05D004923 ORTHO05D005940 1.3e-11 75.9 230 31.3
CDE09G0746 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 2.1e-11 75.1 257 28.8
Ca_10079_v3 Cicer arietinum L. HOM05D004923 ORTHO05D005940 2.4e-10 71.6 710 28.7
QL01p001837 Quercus lobata HOM05D004923 ORTHO05D005940 1.2e-09 69.3 98 44.9
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 1.5e-09 68.9 638 21.8
Psat6g148400 Pisum sativum HOM05D004923 ORTHO05D005940 2.0e-09 68.6 157 36.9
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 3.8e-08 64.3 637 28.4
SHI18226 Sapria himalayana HOM05D004923 ORTHO05D005940 4.9e-08 63.9 178 34.3
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 6.5e-08 63.5 108 40.7
BcaC05g29999 Brassica carinata HOM05D004923 ORTHO05D005940 1.4e-07 62.4 98 36.7
CDE02G2189 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 1.4e-07 62.4 161 29.8
unitig_8.g3020 Utricularia gibba HOM05D004923 ORTHO05D005940 1.4e-07 62.4 606 20.0
BcaC01g00704 Brassica carinata HOM05D004923 ORTHO05D032366 2.1e-06 58.5 175 29.1
BolC3t20618H Brassica oleracea HOM05D004923 ORTHO05D032366 2.1e-06 58.5 175 29.1
Peaxi162Scf00413g00516 Petunia axillaris HOM05D004923 ORTHO05D005940 3.5e-06 57.8 125 30.4


User provided reference genes

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