Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 9.1e-139 496.9 251 100.0
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 1.2e-125 453.4 251 92.4
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 8.4e-100 367.5 254 76.8
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 1.1e-99 367.1 255 75.3
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 7.1e-99 364.4 250 75.2
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.6e-98 363.2 253 74.7
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 4.6e-98 361.7 249 75.5
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 6.0e-98 361.3 250 75.6
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 1.0e-97 360.5 254 73.2
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 7.3e-96 354.4 254 72.4
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 9.6e-96 354.0 256 75.0
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.3e-95 353.6 251 72.5
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 2.1e-95 352.8 251 72.5
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 1.8e-94 349.7 252 72.2
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 4.0e-94 348.6 252 72.6
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 5.3e-94 348.2 256 72.7
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 1.2e-93 347.1 254 69.7
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 1.2e-93 347.1 253 73.9
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 3.4e-93 345.5 255 72.2
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 9.9e-93 344.0 252 71.8
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.4e-91 340.1 254 72.0
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 5.4e-91 338.2 255 70.6
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 5.4e-91 338.2 255 66.3
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 5.4e-91 338.2 251 68.9
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 7.1e-91 337.8 242 69.8
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 7.1e-91 337.8 251 70.5
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 7.1e-91 337.8 251 70.5
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.6e-90 335.1 267 67.4
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 7.9e-90 334.3 254 66.1
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 3.9e-89 332.0 252 67.9
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 5.1e-89 331.6 251 69.3
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 6.6e-89 331.3 254 69.7
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 8.7e-89 330.9 253 68.8
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.1e-88 330.5 252 67.9
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 1.5e-88 330.1 255 67.8
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.8e-87 325.9 252 66.7
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 2.8e-87 325.9 227 71.8
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 2.4e-86 322.8 264 66.3
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 3.1e-86 322.4 249 67.5
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.0e-86 322.0 292 62.3
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 1.5e-85 320.1 253 67.2
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 7.6e-85 317.8 253 67.6
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 1.7e-84 316.6 255 68.6
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 2.2e-84 316.2 257 65.4
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 4.9e-84 315.1 253 67.2
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 8.4e-84 314.3 239 69.0
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 3.2e-83 312.4 251 64.9
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 7.1e-83 311.2 251 64.1
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 7.1e-83 311.2 235 67.2
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 3.5e-82 308.9 253 62.1
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 3.5e-82 308.9 262 62.2
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.6e-82 308.5 259 66.0
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 1.0e-81 307.4 251 65.7
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 1.3e-81 307.0 233 68.2
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 1.8e-81 306.6 253 64.8
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 1.8e-81 306.6 233 68.2
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 1.8e-81 306.6 251 62.5
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 1.8e-81 306.6 215 70.2
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 1.8e-81 306.6 251 63.3
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 3.9e-81 305.4 249 62.7
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 5.1e-81 305.1 238 65.5
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 1.1e-80 303.9 252 64.7
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 2.5e-80 302.8 252 62.7
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 4.3e-80 302.0 249 63.1
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 9.6e-80 300.8 245 65.3
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 1.6e-79 300.1 255 62.4
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 2.1e-79 299.7 239 65.3
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 2.1e-79 299.7 243 64.6
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 2.1e-79 299.7 180 79.4
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 3.7e-79 298.9 252 62.3
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 1.4e-78 297.0 252 61.5
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 6.9e-78 294.7 212 69.8
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 3.4e-77 292.4 248 63.3
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 5.8e-77 291.6 241 64.3
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 1.0e-76 290.8 215 67.9
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 1.3e-76 290.4 259 60.2
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 1.3e-76 290.4 232 65.5
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 1.3e-76 290.4 234 66.2
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 1.7e-76 290.0 214 67.3
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 2.2e-76 289.7 252 63.1
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 2.2e-76 289.7 232 65.5
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 1.9e-75 286.6 258 60.9
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 3.2e-75 285.8 261 59.0
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 3.2e-75 285.8 261 59.0
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 5.5e-75 285.0 214 66.4
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 9.3e-75 284.3 222 67.1
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 6.0e-74 281.6 235 62.6
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 1.0e-73 280.8 162 80.9
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 2.1e-71 273.1 218 62.8
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 8.2e-71 271.2 255 57.6
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 3.1e-70 269.2 261 53.3
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 6.9e-70 268.1 252 57.5
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 9.0e-70 267.7 248 58.1
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 1.0e-68 264.2 216 63.4
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 2.9e-68 262.7 265 53.2
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 3.8e-68 262.3 282 55.3
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 1.8e-65 253.4 232 57.8
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 8.7e-65 251.1 238 57.1
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 8.7e-65 251.1 145 86.2
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 2.5e-64 249.6 221 61.5
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 1.3e-63 247.3 145 82.1
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 3.7e-63 245.7 232 53.9
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 2.0e-56 223.4 212 59.9
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 5.7e-56 221.9 179 68.2
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.9e-53 211.8 239 54.4
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 1.0e-49 201.1 134 71.6
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 1.5e-48 197.2 160 61.9
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 2.8e-47 193.0 165 64.8
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 1.8e-46 190.3 189 49.2
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 6.7e-41 171.8 161 49.1
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 7.5e-40 168.3 187 45.5
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 3.7e-39 166.0 95 82.1
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 3.7e-39 166.0 226 42.0
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 6.3e-39 165.2 144 65.3
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.2e-36 156.8 137 65.0
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 1.8e-33 147.1 164 52.4
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 6.5e-28 128.6 96 64.6
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 1.2e-24 117.9 68 79.4
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 9.2e-14 81.6 180 28.3
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 1.3e-12 77.8 132 33.3
PRCOL_00002748 Prasinoderma coloniale HOM05D006710 ORTHO05D008353 3.1e-09 66.6 139 33.1
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 5.2e-09 65.9 139 30.2
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 1.7e-07 60.8 62 53.2


User provided reference genes

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