Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G012800 Populus trichocarpa HOM05D010921 ORTHO05D013092 1.1e-90 336.7 173 100.0
Sabra13G0011600 Salix brachista HOM05D010921 ORTHO05D013092 6.2e-70 267.7 166 81.3
Potri.013G012733 Populus trichocarpa HOM05D010921 ORTHO05D013092 1.1e-69 266.9 173 79.8
Potri.013G012766 Populus trichocarpa HOM05D010921 ORTHO05D013092 2.0e-68 262.7 173 76.9
Sabra13G0011500 Salix brachista HOM05D010921 ORTHO05D013092 5.6e-63 244.6 173 71.1
Sabra13G0011400 Salix brachista HOM05D010921 ORTHO05D013092 2.7e-49 199.1 169 64.5
Potri.005G022200 Populus trichocarpa HOM05D010921 ORTHO05D013092 8.7e-48 194.1 174 60.3
Sabra05G0028300 Salix brachista HOM05D010921 ORTHO05D013092 1.1e-39 167.2 179 52.0
Potri.005G195200 Populus trichocarpa HOM05D010921 ORTHO05D013092 9.7e-39 164.1 183 50.8
Sabra05G0028500 Salix brachista HOM05D010921 ORTHO05D013092 2.4e-37 159.5 180 50.6
Sabra05G0148700 Salix brachista HOM05D010921 ORTHO05D013092 1.2e-36 157.1 183 49.7
Potri.005G022250 Populus trichocarpa HOM05D010921 ORTHO05D013092 3.8e-35 152.1 180 47.2
Potri.005G022300 Populus trichocarpa HOM05D010921 ORTHO05D013092 3.8e-35 152.1 180 47.2
Potri.005G022400 Populus trichocarpa HOM05D010921 ORTHO05D013092 6.5e-35 151.4 180 47.2
Sabra05G0027900 Salix brachista HOM05D010921 ORTHO05D013092 8.5e-35 151.0 135 59.3
Potri.001G073350 Populus trichocarpa HOM05D010921 ORTHO05D013092 5.3e-29 131.7 168 42.9
SHI09077 Sapria himalayana HOM05D010921 ORTHO05D013092 5.0e-27 125.2 146 45.9
Manes.18G093900 Manihot esculenta HOM05D010921 ORTHO05D013092 1.6e-25 120.2 181 38.7
Manes.02G182100 Manihot esculenta HOM05D010921 ORTHO05D013092 3.6e-25 119.0 181 38.1
Ciclev10003770m.g Citrus clementina HOM05D004894 ORTHO05D005689 1.3e-14 84.0 155 36.1
Cfa018299 Carpinus fangiana HOM05D004894 ORTHO05D005689 1.6e-12 77.0 184 34.8
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 5.9e-12 75.1 142 33.8
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 1.1e-10 70.9 166 33.1
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 1.5e-10 70.5 145 33.1
Manes.02G182301 Manihot esculenta HOM05D004894 ORTHO05D005689 2.5e-10 69.7 162 30.9
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 3.2e-10 69.3 144 32.6
QL02p037589 Quercus lobata HOM05D004894 ORTHO05D005689 9.4e-10 67.8 149 30.9
SHI09078 Sapria himalayana HOM05D004894 ORTHO05D005689 1.6e-09 67.0 157 31.8
Haze_17777 Corylus avellana HOM05D004894 ORTHO05D005689 1.8e-08 63.5 155 31.0
QL02p038558 Quercus lobata HOM05D004894 ORTHO05D005689 2.3e-08 63.2 142 31.0
Cfa018298 Carpinus fangiana HOM05D004894 ORTHO05D005689 5.2e-08 62.0 165 31.5
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 6.8e-08 61.6 152 28.9
QL02p037592 Quercus lobata HOM05D004894 ORTHO05D005689 2.0e-07 60.1 154 29.9
QL02p038562 Quercus lobata HOM05D004894 ORTHO05D005689 2.0e-07 60.1 154 29.9
RcHm_v2.0_Chr6g0274541 Rosa chinensis HOM05D004894 ORTHO05D009560 2.0e-07 60.1 148 30.4
CiPaw.15G014000 Carya illinoinensis HOM05D004894 ORTHO05D005689 4.4e-07 58.9 155 34.2
FAN24G0571 Fragaria x ananassa HOM05D004894 ORTHO05D005689 9.8e-07 57.8 107 34.6
ECA233G5340 Erigeron canadensis HOM05D020282 ORTHO05D010160 3.7e-06 55.8 111 28.8
Nitab4.5_0005440g0020 Nicotiana tabacum HOM05D003146 ORTHO05D001819 3.7e-06 55.8 169 27.2
Glyma.17G044900 Glycine max HOM05D001445 ORTHO05D003404 4.9e-06 55.5 145 29.0
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 6.3e-06 55.1 152 27.6
Carub.0006s3492 Capsella rubella HOM05D003556 ORTHO05D003404 6.3e-06 55.1 139 30.2


User provided reference genes

Program Settings