Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G002000 Populus trichocarpa HOM05D002165 ORTHO05D001531 1.5e-43 179.1 92 100.0
Potri.013G001800 Populus trichocarpa HOM05D002165 ORTHO05D001531 1.1e-41 172.9 92 97.8
Potri.013G001900 Populus trichocarpa HOM05D002165 ORTHO05D001531 1.1e-41 172.9 92 97.8
Sabra05G0014100 Salix brachista HOM05D002165 ORTHO05D001531 1.1e-33 146.4 96 80.2
Potri.005G002500 Populus trichocarpa HOM05D002165 ORTHO05D001531 1.2e-32 142.9 96 81.2
Potri.005G002600 Populus trichocarpa HOM05D002165 ORTHO05D001531 1.2e-32 142.9 96 81.2
Sabra13G0001400 Salix brachista HOM05D002165 ORTHO05D001531 2.6e-30 135.2 92 78.3
Sabra13G0001300 Salix brachista HOM05D002165 ORTHO05D001531 6.3e-29 130.6 95 76.8
Sabra13G0005300 Salix brachista HOM05D002165 ORTHO05D001531 2.1e-24 115.5 95 69.5
Duzib128G1662 Durio zibethinus HOM05D002165 ORTHO05D001531 1.8e-12 75.9 84 50.0
COL.COLO4_05484 Corchorus olitorius HOM05D002165 ORTHO05D001531 3.5e-11 71.6 80 53.8
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 5.9e-11 70.9 92 48.9
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 5.9e-11 70.9 92 48.9
Thecc.09G084900 Theobroma cacao HOM05D002165 ORTHO05D001531 5.9e-11 70.9 90 53.3
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 1.7e-10 69.3 92 53.3
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 6.6e-10 67.4 84 51.2
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 6.6e-10 67.4 84 51.2
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 6.6e-10 67.4 84 51.2
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 6.6e-10 67.4 89 51.7
Carub.0003s0521 Capsella rubella HOM05D002165 ORTHO05D001531 8.6e-10 67.0 85 50.6
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.1e-09 66.6 81 48.1
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.5e-09 66.2 89 51.7
Gohir.D13G184400 Gossypium hirsutum HOM05D002165 ORTHO05D001531 1.5e-09 66.2 90 51.1
Gorai.013G210100 Gossypium raimondii HOM05D002165 ORTHO05D001531 1.5e-09 66.2 90 51.1
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 1.9e-09 65.9 84 51.2
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 1.9e-09 65.9 84 51.2
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 1.9e-09 65.9 84 51.2
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 1.9e-09 65.9 81 48.1
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 3.3e-09 65.1 81 50.6
Gohir.A13G177800 Gossypium hirsutum HOM05D002165 ORTHO05D001531 3.3e-09 65.1 90 51.1
A01p30200 Brassica napus HOM05D002165 ORTHO05D001531 4.3e-09 64.7 84 50.0
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 4.3e-09 64.7 85 49.4
BcaC09g47857 Brassica carinata HOM05D002165 ORTHO05D001531 7.3e-09 63.9 80 47.5
BolC1t05659H Brassica oleracea HOM05D002165 ORTHO05D001531 7.3e-09 63.9 80 47.5
BraA01t04469Z Brassica rapa HOM05D002165 ORTHO05D001531 7.3e-09 63.9 80 47.5
Manes.15G075800 Manihot esculenta HOM05D002165 ORTHO05D001531 7.3e-09 63.9 93 45.2
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 9.5e-09 63.5 81 46.9
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 9.5e-09 63.5 75 52.0
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 1.6e-08 62.8 82 43.9
Thecc.05G329700 Theobroma cacao HOM05D002165 ORTHO05D001531 1.6e-08 62.8 82 48.8
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 2.1e-08 62.4 85 49.4
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.1e-08 62.4 90 51.1
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.1e-08 62.4 82 53.7
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 2.8e-08 62.0 81 49.4
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 3.6e-08 61.6 82 50.0
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 3.6e-08 61.6 82 50.0
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 3.6e-08 61.6 82 50.0
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 3.6e-08 61.6 82 50.0
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 3.6e-08 61.6 82 50.0
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.6e-08 61.6 88 47.7
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.6e-08 61.6 88 47.7
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.7e-08 61.2 83 49.4
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.7e-08 61.2 83 50.6
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 6.1e-08 60.8 81 48.1
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 6.1e-08 60.8 81 48.1
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 6.1e-08 60.8 81 48.1
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 6.1e-08 60.8 81 48.1
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 6.1e-08 60.8 81 48.1
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 6.1e-08 60.8 81 48.1
Sp3g04720 Schrenkiella parvula HOM05D002165 ORTHO05D001531 6.1e-08 60.8 84 48.8
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 8.0e-08 60.5 78 48.7
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 8.0e-08 60.5 81 48.1
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 8.0e-08 60.5 81 48.1
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 8.0e-08 60.5 81 48.1
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 8.0e-08 60.5 83 45.8
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.0e-07 60.1 87 50.6
BcaC05g29776 Brassica carinata HOM05D002165 ORTHO05D001531 1.4e-07 59.7 72 50.0
C05p61420 Brassica napus HOM05D002165 ORTHO05D001531 1.4e-07 59.7 72 51.4
BolC5t34800H Brassica oleracea HOM05D002165 ORTHO05D001531 1.4e-07 59.7 72 51.4
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 1.8e-07 59.3 81 46.9
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 1.8e-07 59.3 81 46.9
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 1.8e-07 59.3 81 46.9
Thhalv10021847m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 1.8e-07 59.3 84 46.4
BcaC05g30083 Brassica carinata HOM05D002165 ORTHO05D001531 2.3e-07 58.9 72 50.0
A05p42200 Brassica napus HOM05D002165 ORTHO05D001531 2.3e-07 58.9 72 50.0
BraA05t22939Z Brassica rapa HOM05D002165 ORTHO05D001531 2.3e-07 58.9 72 50.0
Eucgr.H01332 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.0e-07 58.5 83 48.2
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 4.0e-07 58.2 82 48.8
Ciclev10010714m.g Citrus clementina HOM05D002165 ORTHO05D001531 5.2e-07 57.8 82 50.0
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.2e-07 57.8 82 47.6
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.8e-07 57.4 89 46.1
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 6.8e-07 57.4 80 47.5
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 8.9e-07 57.0 86 45.3
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 8.9e-07 57.0 81 45.7
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.9e-07 57.0 83 47.0
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 8.9e-07 57.0 78 46.2
Aa31LG11G9930 Aethionema arabicum HOM05D002165 ORTHO05D001531 2.0e-06 55.8 76 46.1
Glyma.13G117400 Glycine max HOM05D002165 ORTHO05D001531 2.0e-06 55.8 84 45.2
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.6e-06 55.5 82 48.8
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 3.4e-06 55.1 80 41.2
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.7e-06 54.3 82 47.6
DCAR_002558 Daucus carota HOM05D002165 ORTHO05D001531 7.5e-06 53.9 76 43.4
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 7.5e-06 53.9 70 47.1


User provided reference genes

Program Settings