Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 2.7e-163 578.6 288 100.0
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 3.7e-128 461.8 252 92.1
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 3.5e-126 455.3 252 90.1
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 2.9e-104 382.5 262 74.4
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 3.1e-98 362.5 236 75.4
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 6.9e-98 361.3 252 70.6
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 7.6e-97 357.8 253 70.8
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 1.7e-96 356.7 253 70.0
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.2e-96 356.3 253 71.5
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 2.2e-96 356.3 235 74.9
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 1.1e-95 354.0 253 70.8
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 1.4e-95 353.6 254 71.3
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 3.2e-95 352.4 261 68.2
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 4.2e-95 352.1 252 70.2
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 4.2e-95 352.1 253 68.8
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 7.1e-95 351.3 252 69.4
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 9.3e-95 350.9 253 68.8
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.1e-94 349.7 254 69.3
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 6.0e-94 348.2 253 68.4
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 7.9e-94 347.8 254 69.3
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 7.9e-94 347.8 254 69.3
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 1.0e-93 347.4 254 68.9
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 1.0e-93 347.4 252 69.4
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.3e-93 347.1 252 67.1
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 3.0e-93 345.9 268 65.7
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 6.7e-93 344.7 263 67.3
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 6.7e-93 344.7 253 68.4
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 1.5e-92 343.6 253 69.2
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 1.5e-92 343.6 252 69.0
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 2.5e-92 342.8 268 64.6
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 3.3e-92 342.4 253 68.0
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 4.3e-92 342.0 231 71.4
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 4.3e-92 342.0 253 66.8
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 7.4e-92 341.3 259 67.6
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 9.6e-92 340.9 245 69.8
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 1.3e-91 340.5 261 65.9
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 1.3e-91 340.5 253 68.0
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 2.8e-91 339.3 242 70.2
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 4.8e-91 338.6 288 60.8
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 6.2e-91 338.2 253 68.4
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 6.2e-91 338.2 276 63.0
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 1.1e-90 337.4 231 70.6
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 1.4e-90 337.0 254 66.1
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.4e-90 336.3 252 68.7
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 6.9e-90 334.7 255 65.9
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 6.9e-90 334.7 243 69.5
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 2.6e-89 332.8 249 68.7
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 2.6e-89 332.8 234 69.2
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 3.4e-89 332.4 243 69.5
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 3.4e-89 332.4 243 69.5
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 1.0e-88 330.9 215 76.3
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 1.3e-88 330.5 243 70.4
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 1.3e-88 330.5 249 68.3
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 2.2e-88 329.7 245 68.2
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 2.9e-88 329.3 249 68.7
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 6.5e-88 328.2 227 72.2
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 6.5e-88 328.2 208 78.4
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 8.4e-88 327.8 227 71.8
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 1.4e-87 327.0 249 67.1
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.9e-87 326.6 252 63.5
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 1.9e-87 326.6 261 63.2
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 1.9e-87 326.6 234 69.7
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 2.5e-87 326.2 252 63.5
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 2.5e-87 326.2 254 64.6
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 4.2e-87 325.5 246 66.3
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 5.5e-87 325.1 207 76.8
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 7.1e-87 324.7 218 74.3
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 9.3e-87 324.3 252 63.5
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 1.2e-86 323.9 272 61.0
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 1.2e-86 323.9 253 63.6
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 1.6e-86 323.6 205 75.6
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 3.5e-86 322.4 235 67.7
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 4.6e-86 322.0 228 71.5
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 7.9e-86 321.2 204 76.0
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 7.9e-86 321.2 236 67.8
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 7.9e-86 321.2 234 67.5
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.0e-85 320.9 207 74.4
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 1.8e-85 320.1 228 68.9
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 2.3e-85 319.7 253 63.2
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 5.1e-85 318.5 229 68.1
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 6.7e-85 318.2 239 66.1
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 1.5e-84 317.0 207 76.8
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 2.5e-84 316.2 285 59.3
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 3.3e-84 315.8 253 63.6
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 4.3e-84 315.5 236 67.4
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 4.3e-84 315.5 248 64.9
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 4.3e-84 315.5 207 76.8
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 7.4e-84 314.7 236 66.1
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 7.4e-84 314.7 207 76.3
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 1.3e-83 313.9 242 65.3
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 1.6e-83 313.5 255 63.5
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 3.7e-83 312.4 207 72.9
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 8.2e-83 311.2 236 65.3
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 1.1e-82 310.8 236 66.1
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 4.1e-82 308.9 220 69.1
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 5.3e-82 308.5 253 62.1
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 9.0e-82 307.8 220 70.0
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 4.5e-81 305.4 224 67.4
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.7e-80 303.5 233 67.0
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 3.8e-80 302.4 233 66.5
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 3.8e-80 302.4 204 73.5
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 5.0e-80 302.0 254 60.2
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 5.5e-79 298.5 205 74.1
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 7.2e-79 298.1 218 68.3
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 1.3e-77 293.9 236 61.4
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 3.7e-75 285.8 261 56.7
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 8.5e-72 274.6 196 70.9
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 8.5e-72 274.6 248 55.6
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 1.9e-71 273.5 212 63.7
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 5.5e-71 271.9 245 59.2
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 6.1e-70 268.5 203 64.5
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 1.5e-68 263.8 216 63.0
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 2.8e-67 259.6 208 61.5
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 4.5e-65 252.3 245 53.5
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 4.2e-63 245.7 189 66.7
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 8.2e-59 231.5 210 54.8
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 5.3e-58 228.8 207 54.6
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 6.5e-56 221.9 209 52.2
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 1.2e-54 217.6 181 63.0
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 2.3e-53 213.4 226 53.1
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 8.8e-53 211.5 212 51.9
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 2.8e-51 206.5 171 66.1
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 8.2e-51 204.9 188 58.0
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 3.8e-48 196.1 177 59.3
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 5.0e-48 195.7 250 40.4
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 1.9e-47 193.7 125 70.4
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 1.4e-45 187.6 233 40.3
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 7.0e-42 175.3 130 73.1
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 5.5e-39 165.6 212 41.5
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 3.0e-37 159.8 109 72.5
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 2.8e-30 136.7 102 68.6
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 2.3e-29 133.7 125 57.6
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 5.6e-23 112.5 89 62.9
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 2.0e-20 104.0 144 38.9
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 3.4e-20 103.2 80 70.0
Atru.chr12.48 Acer truncatum HOM05D005616 ORTHO05D006975 7.8e-17 92.0 74 59.5
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 6.6e-16 89.0 62 74.2
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 1.6e-09 67.8 55 65.5
SGA_v2.0_scaffold250G44984 Striga asiatica HOM05D005616 ORTHO05D401959 1.3e-08 64.7 60 55.0
Potri.014G188082 Populus trichocarpa HOM05D005616 ORTHO05D006975 2.3e-08 63.9 38 89.5
Cfa025268 Carpinus fangiana HOM05D003366 ORTHO05D004562 2.1e-06 57.4 225 27.1


User provided reference genes

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