Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 2.7e-80 302.0 156 100.0
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 7.1e-73 277.3 156 91.7
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 1.0e-63 246.9 156 82.7
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 1.7e-63 246.1 156 82.1
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 8.7e-63 243.8 156 80.8
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 1.9e-62 242.7 156 80.1
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 2.5e-62 242.3 156 80.1
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 9.6e-62 240.4 156 81.4
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 9.6e-62 240.4 156 79.5
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 1.3e-61 240.0 156 78.8
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 3.6e-61 238.4 154 80.5
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 6.2e-61 237.7 156 80.8
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 6.9e-60 234.2 156 78.2
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 1.5e-59 233.0 157 77.7
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 1.5e-59 233.0 156 78.8
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 1.5e-59 233.0 156 78.8
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 3.4e-59 231.9 156 77.6
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 4.5e-59 231.5 156 76.9
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 5.8e-59 231.1 156 78.2
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 7.6e-59 230.7 157 78.3
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 9.9e-59 230.3 152 78.9
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 1.3e-58 229.9 156 78.2
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 2.2e-58 229.2 156 77.6
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 2.9e-58 228.8 155 77.4
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 6.4e-58 227.6 143 82.5
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 8.4e-58 227.3 156 78.2
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 1.1e-57 226.9 152 78.3
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 1.4e-57 226.5 156 78.8
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 1.4e-57 226.5 156 78.2
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 2.4e-57 225.7 143 81.8
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 4.2e-57 224.9 156 75.6
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 4.2e-57 224.9 156 75.6
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 9.3e-57 223.8 156 75.0
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 1.6e-56 223.0 126 89.7
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 1.6e-56 223.0 144 81.9
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 2.1e-56 222.6 156 75.0
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 2.1e-56 222.6 158 74.1
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 2.7e-56 222.2 156 74.4
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 4.6e-56 221.5 157 73.9
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 4.6e-56 221.5 158 77.2
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 6.0e-56 221.1 156 76.9
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 6.0e-56 221.1 156 73.1
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 7.9e-56 220.7 125 88.8
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 7.9e-56 220.7 156 76.9
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 7.9e-56 220.7 156 73.7
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 1.0e-55 220.3 156 76.3
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 1.8e-55 219.5 127 85.8
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 1.8e-55 219.5 156 73.7
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 1.8e-55 219.5 161 75.2
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.0e-55 218.8 157 73.2
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 5.1e-55 218.0 127 88.2
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 5.1e-55 218.0 157 73.2
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 6.7e-55 217.6 156 71.8
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 6.7e-55 217.6 157 74.5
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 8.7e-55 217.2 156 75.6
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.1e-54 216.9 157 72.6
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.9e-54 216.1 156 73.1
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 3.3e-54 215.3 156 71.2
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 5.6e-54 214.5 157 75.8
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 5.6e-54 214.5 141 80.1
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 9.6e-54 213.8 127 86.6
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 9.6e-54 213.8 157 73.2
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 9.6e-54 213.8 156 74.4
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 1.6e-53 213.0 156 75.0
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.1e-53 212.6 121 87.6
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 2.8e-53 212.2 121 86.8
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 1.4e-52 209.9 160 72.5
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 3.1e-52 208.8 158 73.4
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.1e-52 208.8 117 90.6
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 5.3e-52 208.0 155 69.7
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 5.3e-52 208.0 157 72.0
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 6.9e-52 207.6 158 74.1
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 9.0e-52 207.2 138 78.3
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.4e-51 205.3 117 88.9
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 4.5e-51 204.9 159 72.3
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 4.5e-51 204.9 125 84.0
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 4.5e-51 204.9 141 78.0
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 5.8e-51 204.5 155 72.3
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 7.6e-51 204.1 160 71.9
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 7.6e-51 204.1 116 89.7
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 7.6e-51 204.1 116 89.7
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 9.9e-51 203.8 162 72.2
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 9.9e-51 203.8 157 72.0
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 9.9e-51 203.8 157 72.0
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 9.9e-51 203.8 118 88.1
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 1.7e-50 203.0 114 93.0
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 4.9e-50 201.4 117 87.2
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.4e-49 199.1 118 87.3
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 1.2e-48 196.8 123 78.9
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.1e-46 190.3 127 78.0
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 1.3e-45 186.8 127 77.2
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 8.2e-45 184.1 130 74.6
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 1.5e-43 179.9 143 69.9
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 3.4e-43 178.7 128 71.9
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 7.6e-43 177.6 127 74.8
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.1e-41 173.7 156 65.4
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 7.1e-41 171.0 128 72.7
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.3e-39 166.8 115 75.7
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 2.3e-39 166.0 118 69.5
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 6.7e-39 164.5 126 67.5
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 4.3e-38 161.8 128 66.4
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 2.2e-37 159.5 129 65.9
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 2.8e-37 159.1 114 74.6
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 6.3e-37 157.9 104 73.1
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 3.1e-36 155.6 137 60.6
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 9.0e-36 154.1 128 63.3
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 8.5e-34 147.5 141 58.2
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 5.5e-33 144.8 96 76.0
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 4.7e-16 88.6 64 76.6
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 1.7e-13 80.1 122 44.3
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 8.2e-13 77.8 94 46.8
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 4.0e-07 58.9 107 37.4
SMO171G0068 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 9.7e-06 54.3 107 34.6


User provided reference genes

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