Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 6.7e-54 213.8 108 100.0
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 2.8e-52 208.4 108 97.2
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 2.7e-47 191.8 108 88.9
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 2.7e-39 165.2 109 77.1
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 1.4e-35 152.9 103 74.8
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 5.3e-35 151.0 109 71.6
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 4.5e-34 147.9 101 73.3
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 7.6e-34 147.1 109 69.7
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 1.7e-33 146.0 114 69.3
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 2.2e-33 145.6 113 67.3
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 2.2e-33 145.6 116 69.0
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 2.9e-33 145.2 121 62.0
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 2.9e-33 145.2 93 79.6
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 3.8e-33 144.8 82 84.1
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 5.0e-33 144.4 112 72.3
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 6.5e-33 144.1 79 89.9
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 6.5e-33 144.1 114 68.4
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 8.5e-33 143.7 77 87.0
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 8.5e-33 143.7 109 69.7
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 1.1e-32 143.3 75 89.3
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.1e-32 143.3 77 88.3
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 1.1e-32 143.3 77 88.3
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 1.9e-32 142.5 77 85.7
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 2.5e-32 142.1 105 69.5
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 3.2e-32 141.7 77 87.0
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 4.2e-32 141.4 80 81.2
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 5.5e-32 141.0 109 66.1
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 1.2e-31 139.8 108 69.4
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 1.2e-31 139.8 104 69.2
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 1.6e-31 139.4 74 87.8
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.1e-31 139.0 75 86.7
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.1e-31 139.0 75 86.7
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 2.1e-31 139.0 80 80.0
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 2.1e-31 139.0 99 72.7
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 2.7e-31 138.7 99 69.7
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 2.7e-31 138.7 106 70.8
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 3.6e-31 138.3 107 67.3
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 4.6e-31 137.9 75 85.3
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 4.6e-31 137.9 75 85.3
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 4.6e-31 137.9 103 69.9
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 4.6e-31 137.9 110 70.0
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 7.9e-31 137.1 99 68.7
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 7.9e-31 137.1 75 84.0
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 1.0e-30 136.7 96 70.8
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 1.0e-30 136.7 93 68.8
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 1.0e-30 136.7 103 66.0
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 1.4e-30 136.3 90 76.7
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 1.4e-30 136.3 108 68.5
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 1.4e-30 136.3 105 67.6
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 1.8e-30 136.0 78 83.3
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 2.3e-30 135.6 78 80.8
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 2.3e-30 135.6 110 68.2
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 3.0e-30 135.2 82 80.5
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 3.0e-30 135.2 75 82.7
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 3.9e-30 134.8 91 75.8
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 3.9e-30 134.8 104 65.4
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 5.1e-30 134.4 78 83.3
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 5.1e-30 134.4 82 80.5
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 6.7e-30 134.0 78 82.1
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 1.1e-29 133.3 86 75.6
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 1.5e-29 132.9 109 61.5
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 1.9e-29 132.5 77 83.1
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 1.9e-29 132.5 107 71.0
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 4.3e-29 131.3 79 81.0
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 7.4e-29 130.6 109 65.1
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 7.4e-29 130.6 105 66.7
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 7.4e-29 130.6 101 66.3
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 9.7e-29 130.2 84 77.4
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 1.3e-28 129.8 116 60.3
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 1.3e-28 129.8 105 65.7
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 2.2e-28 129.0 78 80.8
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 3.7e-28 128.3 76 81.6
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 6.3e-28 127.5 79 78.5
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 6.3e-28 127.5 79 78.5
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 8.2e-28 127.1 145 51.0
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 1.1e-27 126.7 78 78.2
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.4e-27 126.3 107 64.5
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 2.4e-27 125.6 108 64.8
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 3.1e-27 125.2 84 73.8
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 4.1e-27 124.8 79 75.9
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 4.1e-27 124.8 79 75.9
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 4.1e-27 124.8 79 75.9
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 5.3e-27 124.4 79 75.9
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 5.3e-27 124.4 79 75.9
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 5.3e-27 124.4 79 75.9
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 6.9e-27 124.0 108 61.1
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 6.9e-27 124.0 107 63.6
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 6.9e-27 124.0 103 62.1
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 3.4e-26 121.7 74 79.7
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 3.4e-26 121.7 76 76.3
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 4.5e-26 121.3 63 85.7
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 5.9e-26 120.9 74 75.7
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 1.3e-25 119.8 91 65.9
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 2.2e-25 119.0 97 63.9
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 6.5e-25 117.5 109 56.0
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 3.2e-24 115.2 111 54.1
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 7.2e-24 114.0 89 64.0
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 7.2e-24 114.0 78 67.9
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 1.5e-21 106.3 70 72.9
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 1.5e-21 106.3 72 68.1
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 7.4e-21 104.0 101 53.5
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.7e-20 102.8 83 63.9
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 2.2e-20 102.4 83 66.3
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 1.8e-14 82.8 89 55.1
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 7.4e-13 77.4 64 53.1
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 3.1e-11 72.0 105 47.6
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 5.3e-11 71.2 92 50.0
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 7.7e-10 67.4 43 74.4
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 2.2e-09 65.9 42 78.6
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 3.8e-09 65.1 60 66.7
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 7.2e-08 60.8 41 80.5


User provided reference genes

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