Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G129400 Populus trichocarpa HOM05D008269 ORTHO05D010153 2.8e-60 235.3 142 100.0
Sabra12G0097300 Salix brachista HOM05D008269 ORTHO05D010153 1.7e-44 183.0 142 83.1
Potri.015G131300 Populus trichocarpa HOM05D008269 ORTHO05D010153 4.7e-39 164.9 142 66.2
QL02p008773 Quercus lobata HOM05D008269 ORTHO05D010153 2.0e-18 96.3 140 51.4
RcHm_v2.0_Chr1g0375111 Rosa chinensis HOM05D008269 ORTHO05D010153 8.6e-17 90.9 150 41.3
Ciclev10006184m.g Citrus clementina HOM05D008269 ORTHO05D010153 7.2e-16 87.8 140 51.4
Atru.chr1.636 Acer truncatum HOM05D008269 ORTHO05D010153 3.6e-15 85.5 146 53.4
FvH4_7g28161 Fragaria vesca HOM05D008269 ORTHO05D010153 3.6e-15 85.5 149 42.3
Prupe.2G282100 Prunus persica HOM05D008269 ORTHO05D010153 3.6e-15 85.5 145 41.4
Atru.chr1.635 Acer truncatum HOM05D008269 ORTHO05D010153 6.1e-15 84.7 146 54.8
Cfa018156 Carpinus fangiana HOM05D008269 ORTHO05D010153 3.0e-14 82.4 144 51.4
Haze_17962 Corylus avellana HOM05D008269 ORTHO05D010153 3.0e-14 82.4 148 46.6
Manes.06G137900 Manihot esculenta HOM05D008269 ORTHO05D010153 2.0e-13 79.7 139 41.0
Thecc.03G161400 Theobroma cacao HOM05D008269 ORTHO05D010153 3.4e-13 79.0 148 39.9
Prupe.2G282200 Prunus persica HOM05D008269 ORTHO05D010153 5.7e-13 78.2 139 44.6
Nn1g01219 Nelumbo nucifera HOM05D008269 ORTHO05D010153 7.5e-13 77.8 140 37.9
Migut.F00432 Erythranthe guttata HOM05D008269 ORTHO05D010153 1.3e-12 77.0 141 45.4
Rhsim03G0171400 Rhododendron simsii HOM05D008269 ORTHO05D010153 4.9e-12 75.1 144 39.6
Duzib084G0789 Durio zibethinus HOM05D008269 ORTHO05D010153 8.3e-12 74.3 137 41.6
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 8.3e-12 74.3 60 65.0
FAN10G2987 Fragaria x ananassa HOM05D008269 ORTHO05D010153 1.1e-11 73.9 150 39.3
FvH4_7g28170 Fragaria vesca HOM05D008269 ORTHO05D010153 1.4e-11 73.6 153 37.3
Manes.02G153600 Manihot esculenta HOM05D008269 ORTHO05D010153 1.4e-11 73.6 136 37.5
Cpa.g.sc3.272 Carica papaya HOM05D008269 ORTHO05D010153 5.4e-11 71.6 140 37.1
CiPaw.03G096800 Carya illinoinensis HOM05D008269 ORTHO05D010153 7.0e-11 71.2 136 39.0
CiPaw.04G062800 Carya illinoinensis HOM05D008269 ORTHO05D010153 1.2e-10 70.5 139 36.7
RcHm_v2.0_Chr1g0375121 Rosa chinensis HOM05D008269 ORTHO05D010153 1.2e-10 70.5 145 34.5
Nn4g26411 Nelumbo nucifera HOM05D008269 ORTHO05D010153 2.0e-10 69.7 144 48.6
VMungo0464G1635 Vigna mungo HOM05D008269 ORTHO05D010153 1.7e-09 66.6 157 37.6
CANSAT21G0510 Cannabis sativa HOM05D008269 ORTHO05D010153 5.0e-09 65.1 143 42.7
Eucgr.K03333 Eucalyptus grandis HOM05D008269 ORTHO05D010153 1.1e-08 63.9 145 40.7
THA.LOC104821569 Tarenaya hassleriana HOM05D023982 ORTHO05D010153 1.1e-08 63.9 150 48.0
Lalb_Chr19g0131321 Lupinus albus HOM05D008269 ORTHO05D010153 3.3e-08 62.4 146 46.6
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 4.3e-08 62.0 137 45.3
Eucgr.K03334 Eucalyptus grandis HOM05D008269 ORTHO05D010153 7.3e-08 61.2 151 36.4
Eucgr.K03336 Eucalyptus grandis HOM05D008269 ORTHO05D010153 7.3e-08 61.2 132 40.2
FAN03G2753 Fragaria x ananassa HOM05D008269 ORTHO05D010153 1.2e-07 60.5 145 35.2
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.2e-07 60.5 147 36.1
Phvul.004G127400 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 1.6e-07 60.1 145 35.2
PGR047G0001 Punica granatum HOM05D008269 ORTHO05D010153 2.8e-07 59.3 136 33.8
TAR626G1406 Trochodendron aralioides HOM05D004228 ORTHO05D005137 3.6e-07 58.9 128 43.8
MSTRG.8421 Avicennia marina HOM05D008269 ORTHO05D010153 4.7e-07 58.5 147 40.1
Eucgr.K03335 Eucalyptus grandis HOM05D008269 ORTHO05D010153 4.7e-07 58.5 81 43.2
TPR.G10665 Trifolium pratense HOM05D008269 ORTHO05D010153 4.7e-07 58.5 146 42.5
Lsat_1_v5_gn_8_8201 Lactuca sativa HOM05D055346 ORTHO05D010153 8.0e-07 57.8 145 33.8
Peaxi162Scf00032g00022 Petunia axillaris HOM05D012743 ORTHO05D017764 2.3e-06 56.2 159 34.0
ClCG01G005110 Citrullus lanatus HOM05D032672 ORTHO05D010153 8.9e-06 54.3 136 44.1


User provided reference genes

Program Settings