Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G124500 Populus trichocarpa HOM05D007312 ORTHO05D009209 3.0e-66 255.0 126 100.0
Manes.16G055800 Manihot esculenta HOM05D007312 ORTHO05D009209 1.0e-58 229.9 127 88.2
Sabra12G0094300 Salix brachista HOM05D007312 ORTHO05D009209 1.4e-58 229.6 121 94.2
Gohir.A12G046700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 2.4e-55 218.8 126 84.1
Duzib052G0161 Durio zibethinus HOM05D007312 ORTHO05D009209 1.6e-54 216.1 128 83.6
Atru.chr10.560 Acer truncatum HOM05D007312 ORTHO05D009209 5.9e-54 214.2 126 81.7
TWI63G0684 Tripterygium wilfordii HOM05D007312 ORTHO05D009209 8.6e-53 210.3 126 84.1
Nitab4.5_0007745g0050 Nicotiana tabacum HOM05D007312 ORTHO05D009209 3.6e-51 204.9 127 81.9
QL11p016282 Quercus lobata HOM05D007312 ORTHO05D009209 4.7e-51 204.5 126 83.3
Ciclev10017175m.g Citrus clementina HOM05D007312 ORTHO05D009209 1.0e-50 203.4 129 79.1
MELO3C021735.2 Cucumis melo HOM05D007312 ORTHO05D009209 1.8e-50 202.6 129 79.8
PGR042G3076 Punica granatum HOM05D007312 ORTHO05D009209 1.8e-50 202.6 127 80.3
CiPaw.09G076400 Carya illinoinensis HOM05D007312 ORTHO05D009209 2.3e-50 202.2 127 80.3
Sopen02g017880 Solanum pennellii HOM05D007312 ORTHO05D009209 2.3e-50 202.2 128 82.0
PGSC0003DMG400010438 Solanum tuberosum HOM05D007312 ORTHO05D009209 2.3e-50 202.2 128 82.0
MD05G1250400 Malus domestica HOM05D007312 ORTHO05D009209 3.1e-50 201.8 130 80.0
Eucgr.E04250 Eucalyptus grandis HOM05D007312 ORTHO05D009209 4.0e-50 201.4 135 77.8
Cc09_g06000 Coffea canephora HOM05D007312 ORTHO05D009209 5.2e-50 201.1 126 80.2
ClCG01G009570 Citrullus lanatus HOM05D007312 ORTHO05D009209 6.8e-50 200.7 129 79.8
TAR624G0630 Trochodendron aralioides HOM05D007312 ORTHO05D009209 1.2e-49 199.9 126 80.2
CsaV3_1G046220 Cucumis sativus L. HOM05D007312 ORTHO05D009209 2.0e-49 199.1 129 79.1
Nitab4.5_0001288g0230 Nicotiana tabacum HOM05D007312 ORTHO05D009209 2.6e-49 198.7 127 79.5
Solyc02g068710.3 Solanum lycopersicum HOM05D007312 ORTHO05D009209 3.4e-49 198.4 128 81.2
Actinidia22408 Actinidia chinensis HOM05D007312 ORTHO05D009209 5.8e-49 197.6 126 77.8
Peaxi162Scf00149g00224 Petunia axillaris HOM05D007312 ORTHO05D009209 5.8e-49 197.6 127 81.1
CANSAT35G0781 Cannabis sativa HOM05D007312 ORTHO05D009209 7.5e-49 197.2 126 77.8
Ca_18754_v3 Cicer arietinum L. HOM05D007312 ORTHO05D009209 1.3e-48 196.4 129 78.3
Hma1.2p1_1005F.1_g246920 Hydrangea macrophylla HOM05D007312 ORTHO05D009209 1.7e-48 196.1 132 77.3
CSS0025621 Camellia sinensis var. sinensis HOM05D007312 ORTHO05D009209 2.2e-48 195.7 129 74.4
Phvul.002G097300 Phaseolus vulgaris HOM05D007312 ORTHO05D009209 2.9e-48 195.3 130 78.5
TPR.G38271 Trifolium pratense HOM05D007312 ORTHO05D009209 4.9e-48 194.5 126 78.6
Hund14701 Selenicereus undatus HOM05D007312 ORTHO05D009209 6.4e-48 194.1 124 81.5
VMungo0251G1106 Vigna mungo HOM05D007312 ORTHO05D009209 6.4e-48 194.1 130 79.2
AL1G49340 Arabidopsis lyrata HOM05D007312 ORTHO05D009209 1.1e-47 193.4 127 76.4
EL10Ac5g12681 Beta vulgaris HOM05D007312 ORTHO05D009209 1.4e-47 193.0 126 79.4
Glyma.20G019100 Glycine max HOM05D007312 ORTHO05D009209 1.9e-47 192.6 130 78.5
Medtr4g084180 Medicago truncatula HOM05D007312 ORTHO05D009209 1.9e-47 192.6 128 78.9
GSVIVG01012104001 Vitis vinifera HOM05D007312 ORTHO05D009209 1.9e-47 192.6 126 76.2
AT1G31170 Arabidopsis thaliana HOM05D007312 ORTHO05D009209 2.4e-47 192.2 127 75.6
CARHR030640 Cardamine hirsuta HOM05D007312 ORTHO05D009209 2.4e-47 192.2 127 76.4
Ah.01g020500 Amaranthus hybridus HOM05D007312 ORTHO05D009209 3.2e-47 191.8 121 81.8
Thhalv10009117m.g Eutrema salsugineum HOM05D007312 ORTHO05D009209 3.2e-47 191.8 127 75.6
ECA234G3951 Erigeron canadensis HOM05D007312 ORTHO05D009209 5.4e-47 191.0 131 74.0
HanXRQChr12g0381571 Helianthus annuus HOM05D007312 ORTHO05D009209 1.6e-46 189.5 131 73.3
Sp1g26990 Schrenkiella parvula HOM05D007312 ORTHO05D009209 1.6e-46 189.5 128 75.8
MSTRG.7597 Avicennia marina HOM05D007312 ORTHO05D009209 2.0e-46 189.1 128 76.6
RhsimUnG0109200 Rhododendron simsii HOM05D007312 ORTHO05D009209 2.0e-46 189.1 121 78.5
BcaB04g18176 Brassica carinata HOM05D007312 ORTHO05D009209 2.7e-46 188.7 129 75.2
SalBow8G4543 Salvia bowleyana HOM05D007312 ORTHO05D009209 2.7e-46 188.7 124 79.0
AUR62010557 Chenopodium quinoa HOM05D007312 ORTHO05D009209 3.5e-46 188.3 121 80.2
Os06g0174300 Oryza sativa ssp. japonica HOM05D007312 ORTHO05D009209 3.5e-46 188.3 140 68.6
RcHm_v2.0_Chr5g0020311 Rosa chinensis HOM05D007312 ORTHO05D009209 3.5e-46 188.3 130 76.2
BcaC07g37774 Brassica carinata HOM05D007312 ORTHO05D009209 4.6e-46 188.0 123 76.4
Lj2A350T56 Lonicera japonica HOM05D007312 ORTHO05D009209 6.0e-46 187.6 123 74.8
Carub.0001s2957 Capsella rubella HOM05D007312 ORTHO05D009209 7.8e-46 187.2 123 75.6
MBI18_g11473_MAGBIO Magnolia biondii HOM05D007312 ORTHO05D009209 1.0e-45 186.8 132 73.5
Rhsim13G0146500 Rhododendron simsii HOM05D007312 ORTHO05D009209 1.3e-45 186.4 121 77.7
Lj4g0021225 Lotus japonicus HOM05D007312 ORTHO05D009209 1.7e-45 186.0 130 75.4
Zm00001eb375250 Zea mays HOM05D007312 ORTHO05D009209 1.7e-45 186.0 118 77.1
Lsat_1_v5_gn_3_106761 Lactuca sativa HOM05D007312 ORTHO05D009209 3.0e-45 185.3 131 73.3
SGA_v2.0_scaffold298G47689 Striga asiatica HOM05D007312 ORTHO05D009209 6.6e-45 184.1 130 74.6
THA.LOC104798553 Tarenaya hassleriana HOM05D007312 ORTHO05D009209 8.6e-45 183.7 129 73.6
Lalb_Chr16g0385171 Lupinus albus HOM05D007312 ORTHO05D009209 4.3e-44 181.4 128 71.9
AUR62017332 Chenopodium quinoa HOM05D007312 ORTHO05D009209 3.6e-43 178.3 121 76.9
FvH4_3g12430 Fragaria vesca HOM05D007312 ORTHO05D009209 3.6e-43 178.3 125 74.4
BolC8t48163H Brassica oleracea HOM05D007312 ORTHO05D009209 4.7e-43 177.9 118 75.4
unitig_32.g10991 Utricularia gibba HOM05D000532 ORTHO05D009209 8.1e-43 177.2 97 83.5
Haze_06075 Corylus avellana HOM05D007312 ORTHO05D009209 1.4e-42 176.4 121 73.6
Psat7g129800 Pisum sativum HOM05D007312 ORTHO05D009209 1.8e-42 176.0 117 76.9
arahy.Tifrunner.gnm1.ann1.XDA00H Arachis hypogaea HOM05D007312 ORTHO05D009209 2.3e-42 175.6 125 71.2
A08p10710 Brassica napus HOM05D007312 ORTHO05D009209 2.3e-42 175.6 123 70.7
BraA08t33069Z Brassica rapa HOM05D007312 ORTHO05D009209 2.3e-42 175.6 123 70.7
CDE02G1125 Ceratophyllum demersum HOM05D007312 ORTHO05D009209 2.3e-42 175.6 128 71.1
Migut.M01988 Erythranthe guttata HOM05D007312 ORTHO05D009209 4.0e-42 174.9 93 88.2
PSO541G3426 Papaver somniferum HOM05D007312 ORTHO05D009209 6.8e-42 174.1 112 73.2
CAN.G149.9 Capsicum annuum HOM05D007312 ORTHO05D009209 8.9e-42 173.7 99 84.8
Aa31LG2G15110 Aethionema arabicum HOM05D007312 ORTHO05D009209 1.5e-41 172.9 109 76.1
vmacro03527 Vaccinium macrocarpon HOM05D007312 ORTHO05D009209 3.4e-41 171.8 98 84.7
Aqoxy1G01718 Aquilegia oxysepala HOM05D007312 ORTHO05D009209 1.4e-39 166.4 129 66.7
Nn7g38246 Nelumbo nucifera HOM05D007312 ORTHO05D009209 2.4e-39 165.6 126 72.2
arahy.Tifrunner.gnm1.ann1.FJ5394 Arachis hypogaea HOM05D007312 ORTHO05D009209 9.2e-39 163.7 126 69.8
HPP92_010212 Vanilla planifolia HOM05D007312 ORTHO05D009209 9.2e-39 163.7 123 69.1
Pp3c7_15740 Physcomitrium patens HOM05D007312 ORTHO05D009209 8.6e-37 157.1 90 80.0
SMO145G0246 Selaginella moellendorffii HOM05D007312 ORTHO05D009209 2.8e-35 152.1 85 80.0
Mapoly0066s0018 Marchantia polymorpha HOM05D007312 ORTHO05D009209 1.7e-32 142.9 164 48.8
Cre17.g729950 Chlamydomonas reinhardtii HOM05D007312 ORTHO05D009209 2.1e-30 136.0 95 68.4
RcHm_v2.0_Chr2g0126261 Rosa chinensis HOM05D007312 ORTHO05D009209 4.6e-30 134.8 85 77.6
Dinv25919 Davidia involucrata HOM05D007312 ORTHO05D009209 5.1e-29 131.3 90 78.9
CBR_g4 Chara braunii HOM05D007312 ORTHO05D009209 6.6e-29 131.0 93 68.8
Prupe.4G113200 Prunus persica HOM05D007312 ORTHO05D009209 2.4e-26 122.5 96 69.8
Thecc.02G008700 Theobroma cacao HOM05D007312 ORTHO05D009209 5.2e-26 121.3 84 72.6
HPP92_010191 Vanilla planifolia HOM05D007312 ORTHO05D009209 1.5e-25 119.8 128 57.0
Gorai.008G048300 Gossypium raimondii HOM05D007312 ORTHO05D009209 4.4e-25 118.2 79 73.4
Gohir.D12G045700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 5.8e-25 117.9 79 73.4
Cpa.g.sc5085.1 Carica papaya HOM05D007312 ORTHO05D009209 7.6e-25 117.5 78 79.5
Oeu056034.1 Olea europaea HOM05D007312 ORTHO05D009209 2.2e-24 115.9 90 71.1
Sc01g0008940 Simmondsia chinensis HOM05D007312 ORTHO05D009209 1.3e-21 106.7 81 72.8
FAN25G0614 Fragaria x ananassa HOM05D007312 ORTHO05D009209 3.9e-21 105.1 98 63.3
Sabra12G0063500 Salix brachista HOM05D007312 ORTHO05D009209 5.6e-20 101.3 54 92.6
ATR0752G167 Amborella trichopoda HOM05D007312 ORTHO05D009209 7.3e-20 100.9 81 66.7
COL.COLO4_17652 Corchorus olitorius HOM05D007312 ORTHO05D009209 1.3e-19 100.1 84 63.1
Sed0015339 Sechium edule HOM05D007312 ORTHO05D009209 1.4e-18 96.7 84 66.7
FAN21G0246 Fragaria x ananassa HOM05D007312 ORTHO05D009209 1.7e-16 89.7 85 58.8
FAN16G3369 Fragaria x ananassa HOM05D007312 ORTHO05D009209 8.4e-16 87.4 82 61.0
Lalb_Chr09g0328681 Lupinus albus HOM05D007312 ORTHO05D009209 1.9e-15 86.3 41 90.2
Potri.015G124601 Populus trichocarpa HOM05D007312 ORTHO05D009209 5.8e-09 64.7 42 71.4
Lalb_Chr09g0328671 Lupinus albus HOM05D007312 ORTHO05D009209 7.6e-09 64.3 96 45.8


User provided reference genes

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