Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 3.3e-92 341.7 168 100.0
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 5.3e-90 334.3 167 98.2
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 4.9e-72 274.6 168 83.9
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 2.0e-57 226.1 163 63.2
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 2.6e-57 225.7 167 65.9
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 2.6e-57 225.7 157 68.2
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 8.5e-56 220.7 165 65.5
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.5e-55 219.2 164 62.8
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 7.2e-55 217.6 160 64.4
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 1.6e-54 216.5 161 63.4
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.6e-54 216.5 161 64.0
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 2.7e-54 215.7 160 63.8
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 2.7e-54 215.7 149 67.1
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 4.6e-54 214.9 148 66.2
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 6.1e-54 214.5 156 67.3
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 7.9e-54 214.2 161 63.4
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 1.4e-53 213.4 166 59.0
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 3.9e-53 211.8 173 59.5
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 6.7e-53 211.1 146 65.1
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 4.3e-52 208.4 151 61.6
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 7.4e-52 207.6 148 64.9
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 1.7e-51 206.5 153 63.4
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 2.2e-51 206.1 176 56.8
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 2.2e-51 206.1 144 66.0
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 2.8e-51 205.7 154 61.0
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 4.8e-51 204.9 165 58.8
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 1.4e-50 203.4 136 66.2
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 1.8e-50 203.0 145 64.1
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 1.8e-50 203.0 144 64.6
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 6.9e-50 201.1 147 62.6
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 6.9e-50 201.1 135 67.4
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 1.2e-49 200.3 156 60.9
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 2.0e-49 199.5 135 66.7
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 2.6e-49 199.1 153 61.4
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 4.5e-49 198.4 140 67.9
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 7.7e-49 197.6 156 60.3
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 7.7e-49 197.6 156 60.3
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 2.9e-48 195.7 155 59.4
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 6.5e-48 194.5 155 58.1
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 6.5e-48 194.5 139 64.0
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 1.1e-47 193.7 162 58.0
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 1.4e-47 193.4 124 69.4
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 1.9e-47 193.0 142 61.3
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 4.2e-47 191.8 140 63.6
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 4.2e-47 191.8 145 65.5
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 4.2e-47 191.8 155 61.3
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 5.5e-47 191.4 157 58.6
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 9.4e-47 190.7 166 57.8
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.2e-46 190.3 158 60.1
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 1.6e-46 189.9 155 56.1
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 2.1e-46 189.5 153 57.5
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 1.0e-45 187.2 155 57.4
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 1.0e-45 187.2 161 55.9
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 1.4e-45 186.8 152 58.6
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 2.3e-45 186.0 161 59.0
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 3.9e-45 185.3 161 59.0
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 5.1e-45 184.9 145 57.9
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 5.1e-45 184.9 158 59.5
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 1.5e-44 183.3 150 59.3
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 2.6e-44 182.6 145 57.2
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 3.3e-44 182.2 161 52.8
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 3.3e-44 182.2 157 58.0
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 4.4e-44 181.8 145 57.2
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 9.7e-44 180.6 157 55.4
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 9.7e-44 180.6 155 54.2
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 1.7e-43 179.9 145 57.2
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 2.2e-43 179.5 145 55.9
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 2.2e-43 179.5 145 55.9
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 2.2e-43 179.5 150 56.0
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 4.8e-43 178.3 137 59.1
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 6.3e-43 177.9 145 55.2
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 1.1e-42 177.2 157 53.5
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 3.1e-42 175.6 155 54.2
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 4.1e-42 175.3 155 54.2
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 9.1e-42 174.1 140 56.4
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 2.6e-41 172.6 139 56.8
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 7.7e-41 171.0 137 56.9
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 7.7e-41 171.0 137 56.9
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 2.2e-40 169.5 137 56.9
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 2.9e-40 169.1 147 53.1
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 2.9e-40 169.1 160 51.9
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 3.8e-40 168.7 140 55.7
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 5.0e-40 168.3 156 51.9
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 6.5e-40 167.9 161 49.7
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 4.7e-38 161.8 161 50.3
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 4.7e-38 161.8 162 48.8
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 1.0e-37 160.6 130 54.6
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 3.0e-37 159.1 111 65.8
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 6.7e-37 157.9 112 64.3
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 2.8e-35 152.5 140 53.6
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 1.1e-34 150.6 155 46.5
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 1.1e-34 150.6 155 50.3
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 1.4e-34 150.2 155 46.5
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 5.3e-34 148.3 141 52.5
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 5.3e-34 148.3 159 49.7
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 8.5e-32 141.0 120 56.7
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 1.5e-31 140.2 115 57.4
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 9.4e-31 137.5 164 44.5
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 2.1e-30 136.3 93 66.7
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 8.8e-29 131.0 139 47.5
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 5.7e-28 128.3 159 44.7
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 6.5e-24 114.8 128 40.6
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 8.5e-24 114.4 190 35.8
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.1e-23 114.0 84 60.7
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 7.2e-23 111.3 137 41.6
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 7.2e-23 111.3 134 40.3
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 3.4e-20 102.4 213 31.9
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 2.8e-19 99.4 64 68.8
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 2.8e-19 99.4 82 54.9
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 2.1e-14 83.2 151 33.1
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 2.0e-12 76.6 62 58.1
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 9.8e-12 74.3 105 35.2
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 9.2e-10 67.8 48 64.6
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.2e-09 67.4 82 42.7
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 2.0e-09 66.6 152 31.6
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 1.1e-07 60.8 124 31.5
MBI18_g36125_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 9.5e-07 57.8 53 43.4
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.2e-06 57.4 42 57.1


User provided reference genes

Program Settings