Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 1.9e-218 762.3 400 100.0
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 1.8e-189 666.0 431 83.3
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 5.1e-99 365.5 418 50.7
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 8.4e-94 348.2 411 47.7
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 6.0e-92 342.0 414 48.8
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 1.0e-91 341.3 402 50.7
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 4.8e-89 332.4 400 48.0
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 2.6e-87 326.6 416 47.8
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 5.4e-85 318.9 417 45.1
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 5.4e-85 318.9 417 45.1
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 9.3e-85 318.2 417 45.1
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 1.6e-81 307.4 408 45.3
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 8.1e-81 305.1 423 47.3
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 8.1e-81 305.1 423 47.3
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 1.8e-80 303.9 453 41.3
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 2.2e-78 297.0 410 44.6
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 3.0e-75 286.6 417 42.2
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 7.4e-74 282.0 416 43.5
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 2.0e-71 273.9 399 44.4
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 2.6e-71 273.5 420 43.6
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 1.1e-69 268.1 406 40.9
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 1.9e-69 267.3 389 42.9
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 1.3e-67 261.2 436 39.4
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 2.5e-66 256.9 390 43.1
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 2.5e-66 256.9 390 42.3
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 1.6e-65 254.2 386 43.0
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 1.6e-65 254.2 385 41.0
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 2.1e-65 253.8 402 42.8
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 4.8e-65 252.7 409 43.5
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 4.8e-65 252.7 409 43.5
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 4.8e-65 252.7 409 43.5
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 4.8e-65 252.7 404 43.1
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 4.8e-65 252.7 413 42.9
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 1.4e-64 251.1 403 42.9
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 5.3e-64 249.2 323 46.4
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 1.5e-63 247.7 375 41.1
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 2.0e-63 247.3 412 39.8
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.6e-63 246.9 402 41.8
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 2.6e-63 246.9 392 41.6
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 3.4e-63 246.5 415 40.2
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 1.0e-62 245.0 417 40.5
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 2.2e-62 243.8 406 38.4
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 3.8e-62 243.0 427 39.6
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 1.1e-61 241.5 389 41.1
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 7.2e-61 238.8 347 42.7
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 2.7e-60 236.9 412 40.8
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 3.6e-60 236.5 386 41.7
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 7.9e-60 235.3 371 40.4
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 7.7e-55 218.8 369 41.2
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 1.1e-53 214.9 334 41.9
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 1.6e-52 211.1 319 42.9
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 2.3e-51 207.2 404 35.9
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.2e-49 200.7 369 38.2
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 1.3e-46 191.4 358 38.0
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 1.4e-45 188.0 251 43.8
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 1.9e-45 187.6 326 35.3
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 3.6e-44 183.3 209 48.8
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.0e-43 181.8 368 37.5
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 2.4e-40 170.6 332 36.1
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 5.5e-37 159.5 321 35.8
Sabra13G0033600 Salix brachista HOM05D002266 ORTHO05D010337 9.8e-26 122.1 98 71.4
Cpa.g.sc13.177 Carica papaya HOM05D002266 ORTHO05D010337 7.8e-15 85.9 188 35.6
SEGI_02612 Sequoiadendron giganteum HOM05D002266 ORTHO05D000002 6.6e-14 82.8 359 22.3


User provided reference genes

Program Settings