Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.0e-139 500.4 318 100.0
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 3.7e-129 465.3 340 73.8
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 7.1e-112 407.9 231 89.6
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 2.7e-111 406.0 233 87.6
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 7.8e-111 404.4 233 86.3
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 7.8e-111 404.4 231 87.9
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 2.3e-110 402.9 231 87.4
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 8.7e-110 401.0 231 87.0
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 1.9e-109 399.8 231 87.9
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 2.5e-109 399.4 231 86.6
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 2.5e-109 399.4 231 87.0
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 3.3e-109 399.1 326 66.9
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 4.3e-109 398.7 233 85.8
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 5.6e-109 398.3 329 66.3
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 7.3e-109 397.9 233 84.5
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 1.6e-108 396.7 231 85.7
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 2.1e-108 396.4 233 85.0
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 2.1e-108 396.4 233 85.0
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 2.8e-108 396.0 232 85.3
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 4.7e-108 395.2 234 85.5
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 6.2e-108 394.8 229 85.2
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 1.1e-107 394.0 229 85.6
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 1.1e-107 394.0 233 83.3
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 1.4e-107 393.7 231 86.1
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 1.8e-107 393.3 233 84.1
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 2.4e-107 392.9 233 84.1
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 3.1e-107 392.5 233 83.3
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 4.0e-107 392.1 231 84.4
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 4.0e-107 392.1 229 83.8
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 4.0e-107 392.1 233 82.4
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 4.0e-107 392.1 233 82.4
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 4.0e-107 392.1 233 82.4
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 5.2e-107 391.7 228 84.6
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 5.2e-107 391.7 228 84.6
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 6.9e-107 391.3 229 85.2
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 9.0e-107 391.0 228 84.2
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 9.0e-107 391.0 233 82.4
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 9.0e-107 391.0 232 84.1
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 9.0e-107 391.0 232 84.5
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.2e-106 390.6 228 84.2
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 3.4e-106 389.0 233 83.3
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 4.4e-106 388.7 233 84.5
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 4.4e-106 388.7 230 84.8
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 4.4e-106 388.7 230 84.8
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 5.8e-106 388.3 233 84.1
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 9.9e-106 387.5 230 83.0
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 1.3e-105 387.1 234 82.9
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 1.3e-105 387.1 228 83.3
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 2.2e-105 386.3 233 81.5
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 4.9e-105 385.2 230 82.6
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 4.9e-105 385.2 233 81.5
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 1.4e-104 383.6 230 81.7
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 1.4e-104 383.6 233 82.0
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 2.4e-104 382.9 231 82.7
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 3.2e-104 382.5 233 82.0
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 4.2e-104 382.1 230 83.0
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 5.4e-104 381.7 228 82.9
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 9.3e-104 380.9 231 82.3
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 1.2e-103 380.6 230 81.7
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 2.7e-103 379.4 230 80.4
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 1.0e-102 377.5 228 81.6
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 2.3e-102 376.3 229 81.7
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 5.1e-102 375.2 230 80.9
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 8.7e-102 374.4 230 80.4
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 8.7e-102 374.4 230 80.4
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 1.5e-101 373.6 234 77.8
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 1.9e-101 373.2 228 80.3
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.9e-101 373.2 233 79.4
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.9e-101 373.2 233 79.4
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 2.5e-101 372.9 233 78.5
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 2.5e-101 372.9 229 81.2
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 3.3e-101 372.5 229 79.0
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 4.3e-101 372.1 228 80.7
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 7.3e-101 371.3 228 79.4
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 7.3e-101 371.3 234 77.4
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 2.1e-100 369.8 228 79.4
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 3.6e-100 369.0 228 79.8
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 4.8e-100 368.6 228 79.8
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 6.2e-100 368.2 228 79.8
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 6.2e-100 368.2 228 80.3
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 8.1e-100 367.9 228 79.8
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 1.4e-99 367.1 228 78.5
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 1.4e-99 367.1 228 79.8
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 1.8e-99 366.7 228 79.8
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 4.0e-99 365.5 228 78.5
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 4.0e-99 365.5 228 78.5
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 4.0e-99 365.5 223 80.7
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 9.0e-99 364.4 228 78.5
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 1.5e-98 363.6 230 77.0
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 1.3e-97 360.5 226 78.8
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.4e-96 357.1 219 83.1
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 4.2e-96 355.5 228 78.1
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 4.2e-96 355.5 226 77.9
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 6.0e-95 351.7 228 75.9
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 1.3e-94 350.5 208 84.1
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 6.9e-91 338.2 229 72.5
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 6.4e-89 331.6 221 75.1
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 6.4e-89 331.6 233 74.7
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 1.1e-88 330.9 230 73.9
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 9.3e-88 327.8 230 70.0
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 1.6e-84 317.0 229 67.7
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 2.8e-84 316.2 228 66.7
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 9.0e-83 311.2 231 65.4
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 1.1e-80 304.3 228 64.9
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 1.4e-80 303.9 230 67.0
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 2.5e-80 303.1 229 65.5
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 4.2e-80 302.4 230 66.5
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 7.9e-71 271.6 221 60.6
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.0e-62 244.6 229 61.6
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.8e-59 233.8 241 55.2
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 5.9e-50 202.2 134 78.4
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 3.6e-47 193.0 212 52.4
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 5.5e-40 169.1 97 84.5
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 8.8e-38 161.8 103 69.9
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 7.7e-34 148.7 97 77.3
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 5.8e-13 79.3 44 79.5
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 7.3e-08 62.4 64 57.8
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 4.0e-06 56.6 31 74.2


User provided reference genes

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