Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G103600 Populus trichocarpa HOM05D012859 ORTHO05D011228 2.1e-166 589.0 304 100.0
Sabra12G0076100 Salix brachista HOM05D012859 ORTHO05D011228 4.1e-133 478.4 321 82.2
Manes.11G109000 Manihot esculenta HOM05D012859 ORTHO05D011228 5.5e-29 132.5 324 37.3
Manes.14G047246 Manihot esculenta HOM05D012859 ORTHO05D011228 2.2e-25 120.6 317 36.0
Manes.14G047340 Manihot esculenta HOM05D012859 ORTHO05D011228 2.2e-25 120.6 317 36.0
TWI39G0483 Tripterygium wilfordii HOM05D012859 ORTHO05D011228 8.2e-25 118.6 307 33.6
Cpa.g.sc4.137 Carica papaya HOM05D012859 ORTHO05D011228 1.9e-21 107.5 315 32.7
MD14G1150800 Malus domestica HOM05D015491 ORTHO05D013050 6.1e-20 102.4 315 30.2
ClCG06G018170 Citrullus lanatus HOM05D029436 ORTHO05D013050 1.5e-18 97.8 324 31.5
PGR083G1848 Punica granatum HOM05D012859 ORTHO05D011228 1.5e-18 97.8 343 32.1
SHI33986 Sapria himalayana HOM05D012859 ORTHO05D023373 5.3e-16 89.4 258 37.2
MD06G1135600 Malus domestica HOM05D015491 ORTHO05D013050 2.0e-15 87.4 314 27.4
Atru.chr6.1883 Acer truncatum HOM05D012859 ORTHO05D011228 3.5e-15 86.7 319 31.3
THA.LOC104808263 Tarenaya hassleriana HOM05D009755 ORTHO05D011228 7.7e-15 85.5 302 29.5
C02p20690 Brassica napus HOM05D009755 ORTHO05D011228 1.0e-14 85.1 325 29.2
BolC2t08212H Brassica oleracea HOM05D009755 ORTHO05D011228 1.0e-14 85.1 325 29.2
BcaC03g14637 Brassica carinata HOM05D009755 ORTHO05D011228 2.9e-14 83.6 316 29.7
Prupe.5G146000 Prunus persica HOM05D015491 ORTHO05D013050 1.5e-13 81.3 319 27.0
Thecc.03G136200 Theobroma cacao HOM05D022589 ORTHO05D025168 1.5e-13 81.3 289 31.1
MELO3C026179.2 Cucumis melo HOM05D029436 ORTHO05D013050 3.2e-13 80.1 322 30.7
TWI23G0855 Tripterygium wilfordii HOM05D009755 ORTHO05D011228 1.2e-12 78.2 232 28.9
THA.LOC104811564 Tarenaya hassleriana HOM05D009755 ORTHO05D011228 3.6e-12 76.6 291 28.2
A02p12620 Brassica napus HOM05D009755 ORTHO05D011228 1.8e-11 74.3 323 26.9
Rhsim08G0194400 Rhododendron simsii HOM05D012859 ORTHO05D015785 8.8e-11 72.0 315 27.3
Sp6g12970 Schrenkiella parvula HOM05D009755 ORTHO05D011228 2.6e-10 70.5 315 29.5
Thhalv10014294m.g Eutrema salsugineum HOM05D009755 ORTHO05D011228 4.4e-10 69.7 325 27.7
AT5G50830 Arabidopsis thaliana HOM05D009755 ORTHO05D011228 7.5e-10 68.9 313 26.5
BraA02t06320Z Brassica rapa HOM05D009755 ORTHO05D011228 7.5e-10 68.9 312 28.2
Gohir.A12G192600 Gossypium hirsutum HOM05D022589 ORTHO05D025168 1.3e-09 68.2 303 27.1
Lalb_Chr07g0183671 Lupinus albus HOM05D011486 ORTHO05D013306 1.3e-09 68.2 316 26.3
BcaB08g35423 Brassica carinata HOM05D009755 ORTHO05D011228 1.7e-09 67.8 318 26.1
AL8G25000 Arabidopsis lyrata HOM05D009755 ORTHO05D011228 2.8e-09 67.0 313 27.2
CARHR257420 Cardamine hirsuta HOM05D009755 ORTHO05D011228 4.8e-09 66.2 314 27.7
Glyma.08G009600 Glycine max HOM05D011486 ORTHO05D013306 1.4e-08 64.7 304 25.3
CiPaw.12G002700 Carya illinoinensis HOM05D019578 ORTHO05D013050 1.8e-08 64.3 314 26.1
BolC9t56815H Brassica oleracea HOM05D009755 ORTHO05D011228 3.1e-08 63.5 318 27.0
BcaB05g24031 Brassica carinata HOM05D009755 ORTHO05D011228 5.3e-08 62.8 315 27.0
COL.COLO4_16665 Corchorus olitorius HOM05D022589 ORTHO05D025168 5.3e-08 62.8 334 28.7
BcaC04g20773 Brassica carinata HOM05D009755 ORTHO05D011228 7.0e-08 62.4 318 27.4
C09p39410 Brassica napus HOM05D009755 ORTHO05D011228 7.0e-08 62.4 318 27.4
A10p08100 Brassica napus HOM05D009755 ORTHO05D011228 9.1e-08 62.0 319 28.8
Glyma.05G202200 Glycine max HOM05D011486 ORTHO05D013306 9.1e-08 62.0 306 25.8
BraSC35t45986Z Brassica rapa HOM05D009755 ORTHO05D011228 1.2e-07 61.6 319 28.2
CiPaw.11G003100 Carya illinoinensis HOM05D019578 ORTHO05D013050 1.2e-07 61.6 106 45.3
A03p16570 Brassica napus HOM05D009755 ORTHO05D011228 2.7e-07 60.5 306 28.1
BraA03t10944Z Brassica rapa HOM05D009755 ORTHO05D011228 2.7e-07 60.5 306 28.1
Psat7g037960 Pisum sativum HOM05D011486 ORTHO05D013306 2.7e-07 60.5 338 27.5
C03p19500 Brassica napus HOM05D009755 ORTHO05D011228 3.5e-07 60.1 307 27.4
BolC3t14331H Brassica oleracea HOM05D009755 ORTHO05D011228 5.9e-07 59.3 308 27.9
TPR.G11465 Trifolium pratense HOM05D011486 ORTHO05D013306 5.9e-07 59.3 299 27.8
Cfa018780 Carpinus fangiana HOM05D019578 ORTHO05D013050 7.7e-07 58.9 276 31.2
Carub.0008s1082 Capsella rubella HOM05D009755 ORTHO05D011228 2.2e-06 57.4 316 26.9
QL05p049358 Quercus lobata HOM05D019578 ORTHO05D013050 2.2e-06 57.4 323 26.9
Gohir.D12G194700 Gossypium hirsutum HOM05D022589 ORTHO05D025168 3.8e-06 56.6 303 27.1
Gorai.008G209400 Gossypium raimondii HOM05D022589 ORTHO05D025168 3.8e-06 56.6 303 27.4
QL10p001707 Quercus lobata HOM05D019578 ORTHO05D013050 6.5e-06 55.8 326 26.7


User provided reference genes

Program Settings